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2025-04:
02 차재현 SSRI treated MDD patients : Remission analysis results  MAInfo
26 임성수 Interpretation of cancer mutations using a multiscale map of protein systems     J.Club

2025-03:
05 이시은 .Defining the distance between diseases using SNOMED CT embeddings (replication)  TopicSem
15 차재현 Whole exome sequencing analyses identified novel genes for Alzheimer’s disease and related dementia     J.Club
22 전예진 Systematic Mendelian randomization using the human plasma proteome to discover potential therapeutic targets for stroke     J.Club

2025-02:
12 윤미선 Guardrail system for PGx LLM  TopicSem

2025-01:
04 차재현 Effect of Pharmacogenomic Testing for Drug-Gene Interactions on Medication Selection and Remission of Symptoms in Major Depressive Disorder     J.Club
06 임성수 ASPIRE: Chemotherapy response prediction  SysBiol
18 이시은 Erythropoiesis-stimulating agent hyporesponsiveness was associated with worse survival of hemodialysis patients independent of the serum ferritin level      J.Club

2024-12:
14 전예진 Identification of Circulating Plasma Proteins as a Mediator of Hypertension-Driven Cardiac Remodeling: A Mediation Mendelian Randomization Study     J.Club
30 최선 Development of collaborative agents for drug safety and patient management using large language model  TopicSem

2024-11:
04 윤미선 Problem Statement for PGx LLM  TopicSem
14 차재현 Class-Specific GWAS of Antidepressant Response and Remission in MDD patients  TopicSem
16 임성수 Cancer mutations converge on a collection of protein assemblies to predict resistance to replication stress  J.Club
30 문성희 Stress hyperglycemia ratio and sepsis mortality in critically ill patients     J.Club

2024-10:
24 차재현 Class-Specific GWAS of Antidepressant Response and Remission in MDD patients  TopicSem

2024-09:
14 윤미선 LORE: A Literature Semantics Framework for Evidenced Disease Gene Pathogenicity Prediction at Scale     J.Club
21 부은경 Disease prediction with multi-omics and biomarkers empowers case-control genetic discoveries in the UK Biobank     J.Club
28 권호식 Association of Inherited Genetic Factors With Drug-Induced Hepatic Damage Among Children With Acute Lymphoblastic Leukemia     J.Club
30 차재현 Class-Specific GWAS of Antidepressant Response and Remission in MDD patients     TopicSem

2024-08:
19 최선 Customized Nutrition Diet Management Chatbot for CKD patients  TopicSem
22 문성희 Sepsis-related data in MIMIC-IV demo  TopicSem
24 이시은 Evaluation of SNOMED CT Grouper Accuracy and Coverage in Organizing the Electronic Health Record Problem List by Clinical System: Observational Study     J.Club

2024-07:
13 전예진 Algorithmic Identification of Treatment-Emergent Adverse Events From Clinical NotesUsing Large Language Models      J.Club

2024-06:
12 차재현 Review) Tumor mutational and indel burden: a systematic pan-cancer evaluation as prognostic biomarkers  MAInfo
15 권호식 Analysis of somatic mutations in whole blood from 200,618 individuals identifies pervasive positive selection and novel drivers of clonal hematopoiesis     J.Club
17 윤미선 Replication: Empowering personalized pharmacogenomics with generative AI solutions   TopicSem
27 Lilia Discrimination of features for further artificial intelligence modeling using eXtreme Gradient Boosting (XGBoost) for early detection of AKI in patients exposed to nephrotoxic drugs using MIMIC IV dat  TopicSem

2024-05:
23 윤미선 Replication: Empowering personalized pharmacogenomics with generative AI solutions   TopicSem

2024-04:
27 이시은 Association between glycemic variability and shor     J.Club
27 임성수 Drug ranking using machine learning systematically predicts the efficacy of anti-cancer drugs     J.Club

2024-03:
18 윤미선 Supplemental Materials: Pharmacogenetic Profiling in South Korean Population   TopicSem
30 안세환 Empowering personalized pharmacogenomics with generative AI solutions     J.Club

2024-02:
19 안세환 Embedded System  TopicSem

2024-01:
13 권호식 DNA Sequencing to Detect Residual Disease in Adults With Acute Myeloid Leukemia Prior to Hematopoietic Cell Transplant     J.Club
29 최선 ukb template  TopicSem

2023-12:
06 차재현 Review: Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition  MAInfo

2023-11:
20 조민아 Improvement p value ratio cutoff  TopicSem
25 권호식 Systematic pan-cancer analysis of mutation-treatment interactions using large real-world clinicogenomics data     J.Club

2023-10:
05 부은경 Pair-wise analysis of PD using improvement P ratio  TopicSem

2023-09:
14 이시은 Defining the distance between diseases using SNOMED CT embeddings (Replication)  TopicSem
16 부은경 Extremely sparse models of linkage disequilibrium in ancestrally diverse association studies     J.Club
21 최선 Survival analysis of colon cancer screening test implementation  TopicSem

2023-08:
24 이시은 (replication) Defining the distance between diseases using SNOMED-CT embeddings  TopicSem

2023-07:
06 이시은 Defining the distance between diseases using SNOMED CT embeddings (Replication)  TopicSem
13 조민아 M-core analysis of GVB in pair with cutoff of improvement p value ratio   TopicSem
22 최선 Medical Question Understanding and Answering with Knowledge Grounding and Semantic Self-Supervision     J.Club
24 인턴 노서준 - Web Development: Federated Learning System for Breast mass segmentation in ultrasound  TopicSem
27 이시은 Defining the distance between diseases using SNOMED CT embeddings (Replication)  TopicSem
29 이시은 Improving graph embeddings via entity linking: A case study on Italian clinical notes     J.Club

2023-06:
24 이시은 Defining the distance between diseases using SNOMED CT embeddings     J.Club
29 이시은 Defining the distance between diseases using SNOMED CT embeddings   TopicSem

2023-05:
01 차재현 Genome-wide association of polygenic risk extremes for Alzheimer  TopicSem

2023-04:
15 임성수 Clinical and bionarker analyses of sintilimab plus gemcitabine and cisplatin as first-line treatment for patients with advanced biliary tract cancer     J.Club

2023-03:
04 유준기 Germline mutations in mitochondrial complex I reveal genetic and targetable vulnerability in IDH1-mutant acute myeloid leukaemia     J.Club
11 윤미선 Diffusion Models for Implicit Image Segmentation Ensembles     J.Club
18 전예진 A 12-gene pharmacogenetic panel to prevent adverse drug reactions_an open-label, multicentre, controlled, cluster-randiomised crossover implementation study     J.Club

2023-02:
09 권호식 Cell markers and Stem cells  MAInfo
27 김나영 Semantic enrichment of Data Elements using ChatGPT  TopicSem

2023-01:
07 조원일 Discovery and systematic characterization of risk variants and genes for coronary artery disease in over a million participants      J.Club
28 최선 Temporal phenotyping using Deep predictive clustering of disease progression     J.Club

2022-12:
19 정문경 CDEs for modeling meaningful clinical documents to achieve semantic interoperability  TopicSem

2022-10:
13 김나영 Common data elements for modeling meaningful clinical documents to achieve semantic interoperability  TopicSem
17 조민아 All variants of CEMIP2 genes in ulcerative colitis patients  SysBiol
29 부은경 Integrative analysis of drug response and clinical outcome in acute myeloid leukemia     J.Club
29 김나영 Harmonization and standardization of data for a pan-European cohort on SARS- CoV-2 pandemic     J.Club

2022-09:
03 정문경 Recognizing Emotions among Couples Managing Diabetes in Daily Life using Multimodal Real-World Smartwatch Data     J.Club

2022-08:
01 김나영 Semantic data integration of 5 representative Clinical Document items  TopicSem

2022-06:
16 최선 Reinforcement learning  MAInfo
22 조원일 The Ensembl Variant Effect Predictor  BioEMR
25 윤미선 Building digital twins of the human immune system: toward a roadmap     J.Club
30 정문경 Effect of diet therapy in hemodialysis patients (wrap-up)  TopicSem

2022-05:
02 정문경 Effect of diet therapy in hemodialysis patients   TopicSem
14 김나영 Defining health data elements under the HL7 development framework for metadata management     J.Club
21 정문경 A fusion decision system to identify and grade malnutrition in cancer patients: Machine learning reveals feasible workflow from representative real-world data     J.Club
26 정문경 Malnutrition Indicies: research purpose refinements & progess update  TopicSem
28 조민아 A systems genomics approach to uncover patient-specific pathogenic pathways and proteins in ulcerative colitis     J.Club

2022-04:
04 정문경 Effect of diet therapy in hemodialysis patients  TopicSem
23 부은경 New insights into the genetic etiology of Alzheimer’s disease and related dementias     J.Club

2022-03:
10 정문경 Effect of customized diet therapy in hemodialysis patients   TopicSem
26 김나영 Common Data Elements for Meaningful Stroke Documentation in Routine Care and Clinical Research: Retrospective Data Analysis     J.Club
26 정문경 Design issues in personalized nutrition advice systems     J.Club

2022-02:
05 김나영 PGHD management and quality challenges in remote patient monitoring     J.Club
14 정문경 Effect of customized diet therapy in hemodialysis patients (Data Cleaning)  TopicSem

2022-01:
08 안세환 Phenotype prediction and characterization of 25 pharmacogenes in Thais from whole genome sequencing for clinical implementation     J.Club
15 조민아 An open approach to systematically prioritize causal variants and genes at all published human GWAS trait-associated loci      J.Club
29 이시은 Automatic electrocardiogram detection and classification using bidirectional long short-term memory network improved by Bayesian optimization     J.Club

2021-11:
06 안세환 Population-scale predictions of DPD and TPMT phenotypes using a quantitative pharmaacogene-specific ensemble classifier     J.Club
13 이시은 Research on intelligent medical big data system based on Hadoop and blockchain     J.Club
22 김나영 Ideal Model of Admission Note to manage semantics  TopicSem
27 윤미선 Semi-supervised Contrastive Learning for Label-efficient Medical Image Segmentation     J.Club

2021-10:
02 최선 The measurement of Cobb angle based on spine X ray     J.Club
18 김나영 CHMR curation tool improvement ideas  TopicSem
23 조민아 Clinical evolution, genetic landscape and trajectories of clonal hematopoiesis in SAMD9/SAMD9L syndromes     J.Club
23 서명의 Position effects at the FGF8 locus are associated with femoral hypoplasia     J.Club

2021-08:
07 김나영 Towards achieving semantic interoperability of clinical study data with FHIR     J.Club
13 Intern (heeseung) Web structure of Healthcare Showcase demo version  Seminar
14 서명의 Comparison of culture with antibiogram to NGS using bacterial isolates and formalin fixed paraffin embedded gastric biopsies     J.Club

2021-07:
12 Intern cGDM Schema Design of HLA data  TopicSem
17 권호식 Systematic single-variant and gene-based association testing of 3,700 phenotypes in 281,850 UK Biobank exomes     J.Club

2021-06:
14 이우승 Systemic Discovery Prognostic Potential Loss of Heterozygosity IL9 Expression Analysis  TopicSem
19 정문경 Genome-wide gene-diet interaction analysis in the UK Biobank identifies novel effects on Hemoglobin A1c     J.Club
23 김형준 Health systems with document- or data-element-level data handling  BioEMR
26 김나영 One Step Away from Technology but One Step Towards Domain Experts-MDRBridge: A Template-Based ISO 11179-Compliant Metadata Processing Pipeline     J.Club

2021-05:
03 이우승 Systemic Discovery Prognostic Potential Loss of Heterozygosity  TopicSem
20 김형준 Implementation of HAP blockchain and selection of PHR validation mode in Agent apps  TopicSem
22 이우승 Exploiting loss of heterozygosity for allele-selective colorectal cancer chemotherapy     J.Club

2021-04:
01 이우승 Systemic Discovery of Prognosis Potential in Loss of Heterozygosity  TopicSem
10 정문경 DIETOS: A dietary recommender system for chronic diseases monitoring and management     J.Club
13 부은경 A systematic comparison of pharmacogene star allele calling bioinformatics algorithms: a focus on CYP2D6 genotyping  SysBiol
14 김주연 Evaluating risk of problems from Beers Criteria medication combinations  BioEMR
15 김형준 Implementation of HAP blockchain with Avatar app and account management  TopicSem

2021-03:
13 부은경 Genome sequencing analysis identifies new loci associated with Lewy body dementia and provides insights into its genetic architecture     J.Club
13 안세환 Systems Pharmacogenomic Landscape of Drug Similarities from LINCS data: Drug Association Networks     J.Club
18 김형준 Update process for HashSeq management in Avatar DB  TopicSem

2021-02:
01 김형준 Transaction management of HAP with synchronous and asynchrous blockchain  TopicSem
20 김형준 Article Implement an International Interoperable PHR by FHIR—A Taiwan Innovative Application     J.Club
25 김형준 Implementation of Healthavatar blockchain  TopicSem

2021-01:
09 유경훈 Pharmacogenetic information in Swiss drug labels – a systematic analysis     J.Club
16 안세환 A systematic comparison of pharmacogene star allele calling bioinformatics algorithm: a focus on CYP2D6 genotyping     J.Club

2020-12:
12 홍진희 Association between Busulfan Exposure and Outcome in Children Receiving Intravenous Busulfan before Hematologic Stem Cell Transplantation     J.Club
14 김주연 PhaCT: a novel approach for preemptive PGx testing and medication therapy optimization  BioEMR
17 서명의 Sequencing result of NUDT15 and TPMT gene in 150 leukemia patients by using next-generation sequencing panel  TopicSem
19 김형준 Blockchain for Secure EHRs Sharing of Mobile Cloud based E health Systems     J.Club
26 이우승 Advances in germline predisposition to acute leukaemias and myeloid neoplasms     J.Club
31 최선 Applying the ADR template for retinal detachment used in K-CDM to UKB  TopicSem

2020-11:
02 최선 Handling temporality of clinical events with application to Adverse Drug Event detection in Electronic Health Records: A scoping review  xMutant
12 부은경 FastTargetPred: a program enabling the fast prediction of putative protein targets for input chemical databases  SysBiol
17 조민아 All variants of CEMIP2 genes in ulcerative colitis patients  SysBiol
17 조민아 All variants of CEMIP2 genes in ulcerative colitis patients  SysBiol

2020-10:
08 서명의 Mutant CYP2C19 overexpression by using human cell system  TopicSem
24 부은경 Dynamic incorporation of multiple in silico functional annotations empowers rare variant association analysis of large whole-genome sequencing studies at scale     J.Club

2020-09:
12 김형준 An Architecture and Management Platform for Blockchain-Based Personal Health Record Exchange: Development and Usability Study      J.Club
19 유경훈 Identification of Neuropsychiatric Copy Number Variants in a Health Care System Population     J.Club

2020-08:
27 김효정 PGx CDS: modular implementation of CPIC guideline  TopicSem
29 홍진희 .6mp metabolite profiles provide a biochemical explanation for 6mp resistance in patients with inflammatory bowel disease     J.Club
31 김주연 Implementation of pharmacogenomics via a research biobank  BioEMR

2020-07:
13 김주연 The implementation of pharmacogenomics for older adults  SysBiol
18 최선 Comprehensive comparative effectiveness and safety of first-line antihypertensive drug classes: a systematic, multinational, large-scale analysis     J.Club
20 부은경 Analysis to explain difference in genetic burden between males and females in PD  TopicSem

2020-06:
08 최선 Evaluation of LDL-C target achievement according to age after statin prescription  TopicSem
08 유경훈 VEF: a variant filtering tool based on ensemble methods  xMutant
20 김효정 An ancillary genomics system to support the return of pharmacogenomic results     J.Club
25 임영균 Drug response & Prognosis measurement in Cancer Research   MAInfo
27 김지헌 The emerging landscape of health research based on biobanks linked to electronic health records: Existing resources, statistical challenges, and potential opportunities     J.Club

2020-05:
04 김효정 Pharmacogenomic Clinical Decision Support: Modular Implementation of CPIC Guideline   TopicSem
14 최선 EMR Study to verify the efficacy of lipilou  TopicSem
18 김효정 Code system review in UKBB:Read Codes and CTV3  BioEMR
21 부은경 Comparison of genetic loads between males and females with PD  TopicSem
28 김효정 Pharmacogenomic Clinical Decision Support: Modular Implementation of CPIC Guideline   TopicSem
30 부은경 Complementary genes contribute sex-biased vulnerability in diverse disorders     J.Club

2020-04:
06 김효정 Pharmacogenomic Clinical Decision Support: Modular Implementation of CPIC Guideline   TopicSem
16 최선 Evaluating the efficacy of lipilou using EMR  TopicSem
18 김효정 Concepts Driving Pharmacogenomics Implementation Into Everyday Healthcare     J.Club
27 김효정 [review] Development of a Genomic Data Flow Framework: Results of a Survey Administered to NIH-NHGRI IGNITE and eMERGE Consortia Participants  SysBiol

2020-03:
02 박유미 Comparing polygenic risk scores between male and female depressive patients  SysBiol
05 김형준 Implementation of Healthavatar blockchain  TopicSem
09 박유미 A complementary strategy to the current patient drug intolerance classification system using massively parallel sequencing results  TopicSem
09 김효정 Toward systematic integration of CPIC guideline into clinical practice   TopicSem
09 김주연 Review of PGx-Passport: a DPWG-based preemptive pharmacogenetic testing panel  BioEMR
09 김주연 The design and implementation strategy of European pharmacogenomics through the U-PGx consortium  SysBiol
09 김주연 The design and implementation strategy of European pharmacogenomics through the U-PGx consortium  SysBiol
14 최선 A Hybrid Health Journey Recommender System using Electronic Medical Record     J.Club
19 최선 Automated systematic review     TopicSem
21 김주연 Estimated nationwide impact of implementing a preemptive pharmacogenetic panel approach to guide drug prescribing in primary care in The Netherlands     J.Club
30 김형준 Healthavatar Blockchain_update figures and supplementary data  TopicSem
30 박유미 Ischemic heart disease group extraction from UK Biobank patients  xMutant

2020-02:
06 김재환 Development and demonstration of RarePedia (through web service and Python3 API) and Retinitis pigmentosa analysis platform  TopicSem
06 최선 Query design for emr study&  xMutant
06 최선 Query design for emr study&  xMutant
08 김효정 Harmonizing Clinical Sequencing and Interpretation for the eMERGE III Network      J.Club
17 김재환 Development and demonstration of RarePedia and Retinitis pigmentosa analysis platform  Seminar
22 이우승 Discovering the anticancer potential of nononcology drugs by systematic viability profiling     J.Club

2020-01:
06 최선 Automated systematic review_sampling  TopicSem
09 서명의 Application of next‑generation sequencing to analyze drug response in human leukemia by using the panel including 11 genes  TopicSem
16 김형준 Secure patient-centered health data management and exchange in Healthavatar Blockchain.  TopicSem
20 최선 Query design for EMR study  BioEMR
23 김기태 Identifying genes related to age of onset in Major Depressive Disorder (MDD) patients (Additional analysis of suicide attempt)  TopicSem
30 김효정 Toward systematic integration of CPIC guideline into clinical practice   TopicSem

2019-12:
02 최선 Automated systematic review  TopicSem
02 김효정 [Review] The Role of Modeling in Clinical Information System Development Life Cycle  SysBiol
26 박유미 Review of clinical coding classification systems: Read, BNF, and dm d  xMutant
28 김형준 Secure and Scalable mHealth Data Management Using Blockchain Combined With Client Hashchain: System Design and Validation     J.Club
28 윤선민 Determining the balance between drug efficacy and safety by the network and biological system profile of its therapeutic target     J.Club

2019-11:
02 유경훈 Harmonizing Clinical Sequencing and Interpretation for the eMERGE III Network     J.Club
04 김효정 [Review] Implementation and obstacles of pharmacogenetics in clinical practice: An international survey  BioEMR
18 김효정 Toward systematic integration of CPIC guideline into clinical practice: development of PGx CDS pipeline   TopicSem
25 한봄 Genomics and electronic health record systems  BioEMR

2019-10:
07 안세환 Use of Sharesource in Remote Patient Management in Peritoneal Dialysis: A UK Nurse  BioEMR
14 김효정 Systematic integration of CPIC guideline into clinical practice: development of PGx CDS pipeline based on the cGDM   TopicSem
21 김형준 Healthavatar Platform_Mobile Healthcare Platform Facilitating Secure Exchange and Management of Personal Health Record With Permissioned Blockchain  Seminar
21 김주연 Evaluation of systematic synthetic association-contributing variant detection  Seminar
22 김효정 Systematic integration of CPIC guideline into clinical practice: development of PGx CDS pipeline based on the cGDM   Seminar
31 김형준 Mobile Healthcare Platform Facilitating Secure Exchange and Management of Personal Health Record With Permissioned Blockchain  TopicSem

2019-09:
02 김효정 Systematic integration of CPIC guideline into clinical practice: development of PGx CDS pipeline based on the cGDM   TopicSem
19 최선 Research plan for automatic systematic review  TopicSem
28 김효정 The Coriell personalized medicine collaborative pharmacogenomics appraisal, evidence scoring and interpretation system     J.Club
30 김형준 Reviews of other medical blockchain systems  TopicSem
30 유경훈 Pharmacogenomic genotypes define genetic ancestry in patients and enable population-specific genomic implementation  SysBiol

2019-08:
12 박유미 Whole-genome sequencing of rare disease patients in a national healthcare system - Genomics England 100,000 genomes project  SysBiol
12 유경훈 Standardized Biogeographic Grouping System for Annotating Populations in Pharmacogenetic Research     SysBiol
26 김효정 [review] Genomic information for clinicians in the EHR: lessons learns from clinGen and eMerge  SysBiol
31 채정환 PPM1D Mutations Drive Clonal Hematopoiesis in Response to Cytotoxic Chemotherapy     J.Club

2019-07:
01 박유미 Association of CRIM1 variant and 6-mercaptopurine-induced adverse effects in childhood acute lymphoblastic leukemia  SysBiol
04 이우승 Systematic discovery of Prognostic Potential Loss of Heterozygosity  TopicSem
04 서명의 Systematic mutagenesis and enzymatic activity assay for CYP2C19 gene  TopicSem
06 민유정 TogoGenome/TogoStanza: modularized Semantic Web genome database     J.Club
13 김재환 A Model Information Management Plan for Molecular Pathology Sequence Data Using Standards     J.Club
15 김효정 [Review] Implementing Genomic Clinical Decision Support for Drug-Based Precision Medicine  BioEMR
15 김효정 [Review] Implementing Genomic Clinical Decision Support for Drug-Based Precision Medicine  BioEMR
18 김효정 Systematic integration of CPIC guideline into clinical practice: development of PGx CDS pipeline based on the cGDM   TopicSem
25 안세환 A system that measures the weight of a peritoneal dialysis fluid in real time  TopicSem
29 채정환 6MP leukemia experimental designs  TopicSem

2019-06:
03 안세환 Errors in importing Leukemia Data  SysBiol
15 유승원 Systematic discovery of germline cancer predisposition genes through the identification of somatic second hits     J.Club
17 민병주 Genomic variant analysis using leukemia target panel including 11 genes  TopicSem
24 안세환 Importing Leukemia Dataset into cBioPortal  TopicSem
29 국수경 Tracing Oncogene Rearrangements in the Mutational History of Lung Adenocarcinoma.     J.Club

2019-05:
09 민병주 Application of next‑generation sequencing to analyze drug response in human leukemia  TopicSem
11 김효정 Pharmacogenomic clinical decision support design and multi-site process outcomes analysis in the eMERGE Network     J.Club
25 윤선민 Interpreting the clinical significance of combined variants in multiple recessive disease genes: systematic investigation of Joubert syndrome yields little support for oligogenicity.     J.Club
27 서명의 Work flow for systematic mutagenesis candidate selection  TopicSem

2019-04:
18 서명의 Candidate variants in 12 genes for systematic mutagenesis  TopicSem
25 한봄 Steroid-induced Hyperglycemia  TopicSem

2019-03:
11 서명의 Candidate variant selection for systematic mutagenesis and suitable activity assay  TopicSem
21 한봄 Steroid-induced Hyperglycemia  TopicSem

2019-02:
02 서명의 The malaria-protective human glycophorin structural variant DUP4 shows somatic mosaicism and association with hemoglobin levels     J.Club

2019-01:
14 민병주 Combined analysis of Helicobacter pylori and host cytochrome p450 system  TopicSem
17 이정훈 Combination chemotherapy in advanced gastric cancer  SysBiol
24 한봄 Steroid-Induced Hyperglycemia in ALL patients  TopicSem

2018-12:
01 서명의 Homozygous mutations in WEE2 cause fertilization failure and female infertility      J.Club
01 유승원 In silico profiling of systemic effects of drugs to predict unexpected interactions     J.Club
08 채정환 Germline Genetic IKZF1 Variation and Predisposition to Childhood Acute Lymphoblastic Leukemia     J.Club
13 김주연 ITPA gene variants protecting against anemia as a case of synthetic association  SysBiol
26 김기태 Dopaminergic and noradrenergic system, Neurotransmission and Brain-related genes are associated with treatment response in 1,000 Korean patients with Major Depressive Disorder.   Seminar
26 이정훈 TP53 synthetic cytotoxic network for paclitaxel is a biomarker for chemotherapeutic response and prognosis of urogenital cancer  Seminar
27 권호식 High dose MTX induced renal toxicity in pediatric acute lymphoblastic leukemia   Seminar
27 한봄 Steroid-Induced Hyperglycemia in ALL patients  Seminar
27 정문경 A study protocol to examine the effect of a smartphone-based self-management support system for hemodialysis patients.  Seminar

2018-11:
10 최선 MedEx: a medication information extraction system for clinical narratives     J.Club
26 한봄 Steroid-Induced Hyperglycemia  TopicSem

2018-10:
25 한봄 Steroid-induced Hyperglycemia  TopicSem
27 김효정 Towards Implementation of OMOP in a German University Hospital Consortium     J.Club

2018-09:
15 민병주 Risks and Recommendations in Prenatally Detected De Novo Balanced Chromosomal Rearrangements from Assessment of Long-Term Outcomes     J.Club
17 한봄 Steroid-Induced Hyperglycemia  TopicSem
20 권호식 Study : Leukemia and Anticancer drugs  MAInfo

2018-08:
16 한봄 Drug induced hyperglycemia  TopicSem
18 이수현 Analysis of safety reporting requirements during medical device clinical trials in Japan.     J.Club
23 이수현 K-CDM & K-Sentinel: Progression of active pharmacovigilance system in Korea  TopicSem

2018-07:
07 임영균 Systematic analysis of complex genetic interactions     J.Club
12 한봄 Drug-induced Hyperglycemia  TopicSem
19 한봄 Steroid Induced Hyperglycemia  SysBiol

2018-06:
04 권호식 Leukemia WXS Conversion  MAInfo
14 정문경 Research & problems of mHealth technology for CKD  BioEMR
16 이수현 Large-scale adverse effects related to treatment evidence standardization (LAERTES): an open scalable system for linking pharmacovigilance evidence sources with clinical data     J.Club

2018-05:
01 이정훈 WXS for leukemia busulfan-VOD  xMutant
10 한봄 Leukemia WXS data annotation  BioEMR
19 박지연 Machine Learning Identifies Stemness Features Associated with Oncogenic Dedifferentiation     J.Club
21 이수현 RS-ADR: A reference standard for detection of adverse drug reaction signals using electronic health records database and web site demo   TopicSem
26 김주연 Patient-Centered Precision Health In A Learning Health Care System: Geisinger’s Genomic Medicine Experience     J.Club
26 유승원 Systematic identification of feature combinations for predicting drug response with Bayesian multi-view task linear regression     J.Club

2018-04:
02 정문경 PRISMA: guidlines for systematic reviews  MAInfo
02 권호식 Leukemia QC and Annotation  MAInfo
12 김민정 Extreme cases of CD - risc patients analysis   TopicSem
14 김형준 MedRec Using Blockchain for Medical Data Access and Permission Management     J.Club
19 김효정 Schema matching & comparison of completeness; between KIDS-KD and generated KAERS report  BioEMR
26 정문경 PRISMA: guideline for systematic research  BioEMR

2018-03:
05 류영재 Allele matcher scoring scheme alterations  TopicSem
12 유승원 Computing tumor trees from single cells-oncoNEM  MAInfo
15 민병주 Maternal Insertion of APC gene in female CMV-PTC patients  TopicSem

2018-02:
03 김형준 Building a semantic web based metadata repository for facilitating detailed clinical modeling in cacer genome studies     J.Club
10 민병주 Reccurrent F8 Intronic Deletion Found in Mild Hemophilia A Causes Alu Exonization     J.Club
24 김주연 Multisite Investigation of Outcomes With Implementation of CYP2C19 Genotype-Guided Antiplatelet Therapy After Percutaneous Coronary Intervention     J.Club

2018-01:
08 서명의 Reinforcement for low coverage regions in DRP290 SNP Panel and LT Ampliseq WES  TopicSem
11 류영재 Problems with allele matcher switching from VCF to GVCF  MAInfo
13 이우승 Network dynamics-based cancer panel stratification for systemic prediction of anticancer drug response     J.Club
15 김기태 Prediction model for 12 week remission in depression  TopicSem
18 이정훈 Synthetic Dosage Cytotoxicity for prioritization of chemotherapy  SysBiol
22 류영재 Allele matcher fine-tuning and scoring scheme alterations  TopicSem
29 민병주 Disease mechanism prediction for female specific CMV-PTC  TopicSem

2017-12:
06 김형준 Secure interconnection between XNet and BioEMR with JSON Web Token.  TopicSem
18 류영재 NamedAlleleMatcher101 replication  TopicSem
27 김형준 DNet data import to BioEMR  BioEMR

2017-11:
08 김효정 Semi-automantic KAERS report generation on K-CDM structure   BioEMR
09 이정훈 K-CDM: Conversion of EMR data to OMOP format  SysBiol
11 이우승 Overexpressed Somatic Alleles are Enriched in Functional Elements in Breast Cancer     J.Club
13 박유미 Category-dependent score adjustment schemes using genetic algorithm  TopicSem

2017-10:
09 이정훈 Korean Clinical Imaging Guidelines and clinical decision support system  SysBiol
14 김주연 Multidisciplinary model to implement pharmacogenomics at the point of care     J.Club

2017-09:
02 김형준 Opening the Duke electronic health record to apps: ImplementingSMART on FHIR     J.Club
07 김효정 [Review] Enoxaparin-Induced Liver Injury: Case Report and Review of the Literature and FDA Adverse Event Reporting System (FAERS)  BioEMR

2017-08:
10 김효정 bioEMR 개선안  BioEMR
10 김효정 bioEMR 개선안  BioEMR
16 김형준 HealthAvatar API based on CCR+ and Composite DataElement  TopicSem
17 김형준 Data Element API in FHIR(DSTU2, 3)  BioEMR
19 김효정 Signal Detection of Imipenem Compared to Other Drugs from Korea Adverse Event Reporting System Database     J.Club
30 박유미 Selecting appropriate cell lines for evaluating the utility of personalized gene-level scoring (PGS) system  TopicSem

2017-07:
08 유경훈 Semantic prioritization of novel causative genomic variants     J.Club
10 류영재 Chemotherapy and adverse drug reactions in Acute Myeloid Leukemia   SysBiol
22 김주연 Preemptive Pharmacogenomic Testing for Precision Medicine: A Comprehensive Analysis of Five Actionable Pharmacogenomic Genes Using Next-Generation DNA Sequencing and a Customized CYP2D6 Genotyping Cas     J.Club

2017-06:
01 김효정 Problems- drug master data structure conversion  BioEMR
03 박지연 Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq     J.Club
14 김형준 Creating the userdefined CDE through question items in Formbuilder  TopicSem
29 김혜현 Renewal of Data Workflow from EMR/OCS to XNetHub  BioEMR

2017-04:
03 박지혜 ePGA: AWeb-Based Information System for Translational Pharmacogenomics  SysBiol
08 이계화 A systematic approach to the reporting of medically relevant findings from whole genome sequencing     J.Club
10 박호경 Pharmacogenetics of Membrane Transporters ABCB1  SysBiol
22 윤선민 SPATIAL: A System-level PAThway Impact AnaLysis approach     J.Club
22 김형준 C3-PRO. Connecting ResearchKit to the Health System Using i2b2 and FHIR     J.Club

2017-03:
25 박지혜 Prospective participant selection and ranking to maximize actionable pharmacogenetic variants and discovery in the eMERGE Network     J.Club

2017-02:
08 서명의 Comparison of manual and semi-automatic NGS result  TopicSem
08 김효정 Current US EMR implementation status review  BioEMR
11 김효정 Patients, care partners, and shared access to the patient portal: online practices at an integrated health system     J.Club
13 서희원 Association of ADRA1A polymorphism with Ritodrine-induced Pulmonary Edema in 13 pregnant women.  TopicSem
18 임영균 Somatic Mutation Patterns in Hemizygous Genomic Regions Unveil Purifying Selection during Tumor Evolution     J.Club

2017-01:
07 김혜현 Opening the Duke electronic health record to apps: Implementing SMART on FHIR     J.Club
18 김효정 Internet of Avatars, Agents, and Apps; Flexible On-demand Healthcare Information System Architecture  TopicSem
18 김혜현 CDE template forms status in NIH CDE Browser  BioEMR
25 임영균 Influence of Co-occurring Mutations on Clinical Outcomes in leukemia  MAInfo

2016-12:
05 김형준 Design of HealthAvatar API and current status of API implementation.  TopicSem
14 이정훈 Synthetic dosage cancer survival: pan-cancer analysis for systematic inference of negative genetic interaction  TopicSem
14 김형준 Current process of API implementation  BioEMR
14 김형준 Current process of API implementation  BioEMR
30 박유미 A Personalized Gene-level Scoring System for Exome Variants: Comprehensive Evaluation in Multiple Genetic Conditions.  Seminar
30 김형준 EasyFormBuilder- Semi-automatic form building tool based on standardized metadata repository for semantic interoperability.  Seminar

2016-11:
19 김형준 SMART on FHIR implemented over i2b2     J.Club
30 박유미 Comprehensive Evaluation of Gene-level Scoring Systems for Deleterious Exome Variants: Score Normalization issues  TopicSem

2016-10:
05 임영균 Pembrolizumab MSKCC data analysis  MAInfo
08 박지혜 REVEL: an Ensemble Method for Predicting the Pathogenicity of Rare Missense Variants     J.Club
17 박호경 Bina - develops next-generation genomic management   SysBiol
22 서희원 Genetic Variation Among 82 Pharmacogenes: The PGRNseq Data From the eMERGE Network      J.Club
31 박유미 Comprehensive Evaluation of Gene-level Scoring Systems for Deleterious Exome Variants: GDI, RVIS, and PGDS  TopicSem

2016-09:
03 김형준 ODMedit_ uniform semantic annotation for data integration in medicine based on a public metadata repository     J.Club
12 이계화 Gender Difference in ADR - Review of Article (Systematic Analysis of Adverse Event Reports for Sex Differences in Adverse Drug Events, 2015, Scientific Report)   SysBiol

2016-08:
06 김혜현 Developing a data element repository to support EHR-driven phenotype algorithm authoring and execution     J.Club
10 김혜현 Revised evaluation results for semantic relationships of CDEs  TopicSem
15 이정훈 Microarray analysis for stem cell differentication  xMutant
19 김형준 Form building tool based on standardized metadata repository for semi-automatic semantic annotation  Seminar
20 이수현 Design considerations, architecture, and use of the Mini-Sentinel distributed data system     J.Club
20 박호경 Natural Selection and Functional Potentials of Human Noncoding Elements Revealed by Analysis of Next Generation Sequencing Data     J.Club
27 류영재 Determination of a Comprehensive Alternative Splicing Regulatory Network and Combinatorial Regulation by Key Factors during EMT     J.Club

2016-07:
04 김혜현 Constraints and evaluation results for semantic relationships of CDEs  TopicSem
16 서명의 Somatic activating mutations in GNAQ and GNA11 are associated with congenital hemangioma     J.Club

2016-06:
04 김효정 Considering complexity in healthcare systems     J.Club
15 이수현 EMR based adverse drug reaction detection for pharmacovigilance  TopicSem
25 임영균 Characterizing genomic alterations in cancer by complementary functional associations     J.Club
27 윤선민 The complementary interpretations between two pathway groups   TopicSem

2016-05:
04 서명의 Rare variant analysis in FNMTC by sequencing 3 affected individuals and 2 unaffected family members  TopicSem
07 박지혜 Genetic Variation among 82 Pharmacogenes: the PGRN-Seq data from the eMERGE Network      J.Club
21 이정훈 Integrated Drug Expression Analysis for leukemia: an integrated in silico and in vivo approach to drug discovery     J.Club
23 김효정 Health Avatar: flexible on-demand healthcare information system architecture   TopicSem
23 김효정 dynamic programming; knapsack problem  BioEMR
25 김혜현 New figures and tables for the paper of composite common data elements  TopicSem

2016-04:
09 윤선민 An Ensemble Based Top Performing Approach for NCI-DREAM Drug Sensitivity Prediction Challenge     J.Club
11 한지예 m-Health adoption by healthcare professionals: a systematic review     BioEMR
15 이우승 TCGA multicenter calling problem and Validation DP filter  MAInfo
18 김효정 Health Avatar Platform: Flexible On-demand Healthcare Information System Architecture   TopicSem
18 이정훈 Identification of Drug relative genes predictive of Cancer survival in Chemotheraphy agent  SysBiol
29 임영균 Pharmacogenomic agreement between two cancer cell line data sets  MAInfo
30 박지연 A network-based analysis of colon cancer splicing changes reveals a tumorigenesis-favoring regulatory pathway emanating from ELK1     J.Club
30 서명의 De novo loss-of-function mutations in USP9X cause a female-specific recognizable syndrome with developmental delay and congenital malformations     J.Club

2016-03:
02 서희원 Effective filtering strategies, comparison of local de novo assembly, depth and T1GP filters  TopicSem
09 김효정 Health Avatar Platform; Role Based, Problem-wise Health Information System Architecture  TopicSem
12 김혜현 An exploratory study using an openEHR 2-level modeling approach to represent common data elements     J.Club
26 김효정 Development, implementation and evaluation of an information model for archetype based user responsive medical data visualization     J.Club

2016-02:
17 서명의 WES analysis of non-syndromic FNMTC by sequencing 3 affected individuals and an unaffected family member  TopicSem
20 김주연 A prognostic model based on readily available clinical data enriched a pre-emptive pharmacogenetic testing program     J.Club
23 임영균 Patterns and functional implications of rare gremlin variants across 12 cancer types  xMutant

2016-01:
05 류영재 PharmPortal Updated Database Schema  SysBiol
07 김형준 Uploading canvas image data elements of Arthronet  BioEMR
14 김효정 Review:Disrupting Electronic Health Records Systems  BioEMR
15 김혜현 Ensuring Semantic Interoperability in the Course of Clinical Document Exchange using Metadata Registry related Technologies  Seminar
15 김형준 Easy Form Builder : Facilitating both semantic interoperability and usability in creating clinical documents based on MDR.      Seminar
19 김주연 Model on predicting patients likely to benefit from preemptive genotying  SysBiol
23 이우승 Systematic discovery of complex insertions and deletions in human cancers     J.Club
30 김형준 A system to build distributed multivariate models and manage disparate data sharing policies     J.Club

2015-12:
02 김주연 Breakeven analysis of preemptive genotyping  TopicSem
21 박유미 Candidate leukemic variants effect on 181 ALL patients  TopicSem
24 김형준 Uploading data elements of an ArthroNet CRF  BioEMR
26 박유미 Systematic comparison of variant calling pipelines using gold standard personal exome variants     J.Club
28 김혜현 Figures and tables for semantic relationships  TopicSem
31 김현대 validation에 쓰이는 Data Element attribute 기준 정리  BioEMR

2015-11:
24 김주연 Application of breakeven analysis for preemptive genotyping  SysBiol

2015-10:
02 서희원 Loss-of-function variants in CACNA1A and ABI1 interacting proteins from a subject with pulmonary edema  xMutant
07 윤선민 The complementary interpretations between two pathway groups  TopicSem
09 서희원 An automated system for statistical test with variants found in Yutopar subjects  xMutant
10 서희원 GEMINI: Integrative Exploration of Genetic Variation and Genome Annotations     J.Club
14 김혜현 Compare models, CCD, CCR, and FHIR and apply metadata among them   TopicSem
26 김주연 Economic evaluation of preemptive genotyping  TopicSem
31 이우승 Age-related mutations associated with colnal hemtopoietic expansion and malignancies     J.Club

2015-09:
09 김현대 Lab, Medication Dictionary for Semantic Validation  TopicSem
09 김형준 Easy form builder excel template  BioEMR
12 김주연 Electronic health record design and implementation for pharmacogenomics: a local perspective     J.Club
16 김주연 Preemptive genotyping to prevent ADEs: figures and tables  TopicSem
21 김형준 Easy Form Builder(with excel template)  TopicSem
22 김주연 Overview of Korea Adverse Event Reporting System  SysBiol

2015-08:
05 김주연 Results for preemptive genotyping to prevent adverse drug events  TopicSem
07 이우승 Refractory Acute Leukemia(RAL) data analysis result  MAInfo
12 이수현 Overall concepts of RS-ADR and Implementation Status  TopicSem
22 김형준 Semantic enrichment of clinical models towards semantic interoperability The heart failure summary use case.     J.Club

2015-07:
01 김형준 Junior Avatar Data Element 업로드현황  BioEMR
07 김주연 Refined figures for patient demographics and calculation results of preemptive PG study  SysBiol
11 김혜현 Development, implementation, and initial evaluation of a foundational open interoperability standard for oncology treatment planning and summarization     J.Club
11 김주연 Refined figures for patient demographics and calculation results of preemptive PG study  SysBiol
18 김현대 Clinical decision support for atypical orders: detection and warning of atypical medication orders submitted to a computerized provider order entry system     J.Club
20 김효정 Quality Evaluation of a Hospital Information System in a Tertiary General Hospital  TopicSem
25 박유미 Whole-genome sequence variation, population structure and demographic history of the Dutch population     J.Club

2015-06:
13 김주연 Adoption of a clinical PGx implementation program during outpatient care--initial results of the University of Chicago “1,200 Patients Project”     J.Club
16 김주연 Additional results of preemptive genotyping calculation algorithm using 1KP ancestry  SysBiol
16 김주연 Additional results of preemptive genotyping calculation algorithm using 1KP ancestry  SysBiol
24 김효정 Antibiotic prescribing systems  BioEMR
24 김효정 Antibiotic prescribing systems  BioEMR
29 김주연 Preemptive genotyping to prevent ADEs: ancestry-weighted calculation results  TopicSem

2015-05:
01 서희원 Time series analysis of a patient with leukemia M7  xMutant
02 김현대 Transformation of standardized clinical models based on OWL technologies: from CEM to OpenEHR archetypes     J.Club
06 김주연 Calculation workflow for showing need for preemptive genotyping   SysBiol
15 이우승 Review of data for Refractory Acute Leukemia study  xMutant
26 김주연 Calculation scheme for predicting number of people with adverse events using ancestry-weights  SysBiol
27 김주연 Preemptive genotyping for ADE prevention: ancestry weighted calculation scheme  TopicSem
30 이수현 Systems Pharmacology Augments DrugSafety Surveillance     J.Club

2015-04:
01 이계화 Tumor suppressor gene mutation status and chemotherapeutic response in Colon cancer  TopicSem
04 류영재 SFINX - a drug-drug interaction database designed for clinical decision support systems     J.Club
08 김형준 Uploading data elements of CHMR  BioEMR
15 김혜현 (김효정) A Log Analysis of Query Patterns on YUHS Clinical Data Retrieval system(CDRS)  BioEMR
17 서희원 Genetic Characterization of Clonal State in Eosinophilia Anemia Subjects   xMutant
27 김주연 Preemptive genotyping for prevention of drug-related adverse events  TopicSem

2015-03:
04 서희원 Investigation of systematic errors of called variants through alignment viewer.  TopicSem
21 김형준 Ontology-Based Data Integration between Clinical and Research Systems     J.Club
23 김주연 Preemptive genotyping for prevention of drug-related adverse events  TopicSem

2015-02:
02 김혜현 Process of building CCR+ template and conducting CCR+ validation  TopicSem
02 김주연 Preemptive genotyping for prevention of drug-related adverse events  TopicSem
07 김주연 PG4KDS: A Model for the Clinical Implementation of Pre-Emptive Pharmacogenetics     J.Club
11 민병주 NGS panel design for cancer companion diagnostics of targeted chemotherapeutics  TopicSem
17 서희원 Systematic errors in sequence and read level which affect SNV calls  xMutant

2015-01:
02 박유미 Summary of Hereditary Hemolytic Anemia Targeted Sequencing data analysis  MAInfo
05 김현대 AMIA:Visualization of Patient Prescription History Data in Emergency Care     TopicSem
10 이계화 Clonal Hematopoiesis and Blood-Cancer Risk Inferred from Blood DNA Sequence      J.Club
14 이계화 Mutation in tumor suppressor genes and chemotherapeutic response  TopicSem
14 김효정 Review:Disrupting Electronic Health Records Systems  BioEMR
14 김효정 Review:Disrupting Electronic Health Records Systems  BioEMR
19 김형준 Tool for Searching for DataElements  TopicSem
26 서희원 Genetic Characterization of Clonal State in Eosinophilia and Aplastic Anemia Subjects   Seminar

2014-12:
03 김형준 Processing error handling of bioemr  BioEMR
06 안선주 Systematic analysis of noncoding somatic mutations and gene expression alterations across 14 tumor types     J.Club
08 김형준 UserDefined CRF of BioEMR  TopicSem
10 이계화 Homozygous mutation in tumor suppressor gene and chemotherapy response  TopicSem
13 김주연 Development and use of active clinical decision support for preemptive pharmacogenomics     J.Club
26 이계화 Mutation in TSGs and chemotherapy response  MAInfo
27 박유미 Somatic mutations identify a subgroup of aplastic anemia patients who progress to myelodysplastic syndrome     J.Club
29 김주연 Preemptive genotyping for prevention of drug-related adverse events  TopicSem
31 김혜현 Build hemodialysis DEs according to ISO/IEC 11179  TopicSem

2014-11:
03 김형준 Handling error of BioEMR  TopicSem
08 임영균 Defining the disease liability of variants in the cystic fibrosis transmembrane conductance regulator gene     J.Club
12 김형준 Current status and future plan for the advanced BioEMR  BioEMR
13 김승호 BioEMR(iPad) 개발현황 및 문제사항  BioEMR
14 이계화 LOH of tumor suppressor genes and chemotherapy response using TCGA data  MAInfo
14 이계화 LOH of tumor suppressor genes and chemotherapy response using TCGA data  MAInfo
14 이계화 LOH of tumor suppressor genes and chemotherapy response using TCGA data  MAInfo
15 류영재 An empirical estimate of carrier frequencies for 400+ causal Mendelian variants: results from an ethnically diverse clinical sample of 23,453 individuals     J.Club
24 김주연 Preemptive genotyping for prevention of drug-related adverse events  TopicSem

2014-10:
01 이계화 Identifying genes associated with chemotherapy response using TCGA data  TopicSem
02 서희원 Sequencing data quality checklist and accuracy measurement  xMutant
04 서희원 A systematic review of cancer GWAS and candidate gene meta-analyses reveals limited overlap but similar effect sizes.     J.Club
08 민병주 Performance comparison between low coverage semiconductor sequencing and aCGH to analyze copy number variation  TopicSem
11 이수연S Pharmacogenomic characterization of gemcitabine response – a framework for data integration to enable personalized medicine     J.Club
15 김형준 BioEMR 추가기능 개선작업 및 에러 수정진행상항  BioEMR
18 김형준 Procurement of shared data instruments for Research Electronic Data Capture (REDCap)     J.Club
20 김주연 Preemptive genotyping for prevention of drug-related adverse events  TopicSem
29 박유미 AA(aplastic anaemia), Eos(eosinophilia), and HS(Hereditary spherocytosis) Data preprocessing  TopicSem

2014-09:
20 김주연 Design and Anticipated Outcomes of the eMERGE-PGx Project: A Multicenter Pilot for Preemptive Pharmacogenomics in Electronic Health Record Systems     J.Club
22 김형준 BioEMR report with additional functionality system  TopicSem
24 김주연 Calculation of number of potential adverse events prevented from preemptive genotyping-meta analysis process  SysBiol
24 김주연 Calculation of number of potential adverse events prevented from preemptive genotyping-meta analysis process  SysBiol

2014-08:
16 김주연 Preemptive genotyping for personalized medicine: design of the right drug, right dose, right time-using genomic data to individualize treatment protocol     J.Club
20 박유미 Systematic meta-analyses of Alzheimer disease genetic association studies  xMutant
20 김형준 Result of error handling of BioEMR  BioEMR
23 이우승 Deep RNA sequencing Reveals dynamic regulation of myocardial noncoding rnas in failing human heart and remodeling with mechanical circulatory support  J.Club
29 이계화 TCGA-Assembler: open-source software for retrieving and processing TCGA data  MAInfo

2014-07:
07 박유미 Gene Scoring scheme revision using CADD score  TopicSem
09 서희원 Systematic identification of relationship between marker SNP and cancer susceptibility gene  TopicSem
15 백수연 systemetic validation result of ADR gene detection  SysBiol
15 백수연 systemetic validation result of ADR gene detection  SysBiol
16 김형준 Automatic Transformation of Data Models with Semantic Annotations  BioEMR
18 박유미 LOH of tumor suppressor genes and chemotherapy response using TCGA data  MAInfo
24 Intern Validation of Acute Myeloid Leukemia M1 subtype prognostic markers using the TCGA data   Seminar
28 김주연 Preemptive genotyping for prevention of drug-related adverse events  TopicSem

2014-06:
14 백수연 Integrating Systems Biology Sources Illuminates Drug Action     J.Club
30 김주연 Preemptive genotyping for prevention of drug-related adverse events  TopicSem

2014-05:
17 김주연 Optimizing Drug Outcomes through Pharmacogenetics: a Case for Preemptive genotyping     J.Club
23 김형준 BioEMR Export(final)  BioEMR
30 김혜현 Establishing Semantic Relationships in MDR for Representing PHR  Seminar

2014-04:
12 이수현 Dose-specific adverse drug reaction identification in electronic patient records: temporal data mining in an inpatient psychiatric population.     J.Club
12 백수연 Systematic identification of genomic markers of drug sensitivity in cancer cells     J.Club
16 고인석 코드 시스템 manual mapping in CCR and KPIS ER schema  BioEMR
26 임영균 Identification of synthetic lethal pairs in biological systems through network information centrality     J.Club
30 서희원 Rapid and Accurate Semiconductor-based Sequencing of Whole Exome  TopicSem

2014-03:
06 고인석 Mapping problems and normalization process of ingredient in KPIS  BioEMR
08 고인석 Automated Mapping of Pharmacy Orders from Two Electronic Health Record Systems to RxNorm within the STRIDE Clinical Data Warehouse     J.Club
15 민병주 A Higher Mutational Burden in Females Supports a ‘‘Female Protective Model’’ in Neurodevelopmental Disorders     J.Club
22 박지혜 Clinically Actionable Genotypes Among 10,000 Patients With Preemptive Pharmacogenomic Testing  J.Club
25 김혜현 2차 BioEMR 공개방안 회의  BioEMR
26 고인석 Review: Establishing Semantic Interoperability of Biomedical Metadata Registries using Extended Semantic Relationships  BioEMR
31 서명의 Whole exome sequencing by using Ampliseq system  TopicSem

2014-02:
03 서명의 Targeted sequencing system  TopicSem
05 백수연 Research scheme for find out mechanism of ADR outbreak  TopicSem

2014-01:
04 이수연S Chemotherapeutic drug susceptibility associated SNPs are enriched in expression quantitative trait loci     J.Club
04 김혜현 Development and evaluation of an ensemble resource linking medications to their indications     J.Club
07 김형준 An offline mobile nutrition monitoring intervention for varying-literacy patients receiving hemodialysis  BioEMR
08 서명의 Targeted sequencing using the target enrichment system  TopicSem
13 백수연 PharmSafe algorithm considering individual genotype & ADR research scheme  TopicSem

2013-12:
05 고인석 Web parsing problems on KPIS  BioEMR
10 서희원 Web-based analysis system flowchart  xMutant
16 서희원 Web-based Analysis System for Associations between genotypes and gene scores   TopicSem
17 서희원 Web-based Analysis System  xMutant
23 이계화 EMR based research : PheWAS review  TopicSem
28 박지혜 PubChem BioAssay : 2014 update     J.Club

2013-11:
09 박지혜 Systematic Pharmacogenomics Analysis of Malay Whole Genome : Proof of Concept for Personalized Medicine     J.Club
30 백수연 The Coriell personalized medicine collaborative pharmacogenomics appraisal, evidence scoring and interpretation system     J.Club

2013-10:
12 백수연 Predicting Adverse Drug Reactions Using Publicly Available PubChem BioAssay Data     J.Club
21 이수연S PharmSafe web system flow & Androgenetic Alopecia risk calculation  TopicSem
22 서희원 The number of Ensembl gene IDs in SIFT DB and Ensembl DB  xMutant
23 김혜현 Assembled lifelog data structure based on MELLO  TopicSem
31 김혜현 MELLO items for representing assemble lifelog data  BioEMR

2013-09:
10 임재현 current statistics for transcriptome reference : ensembl  SysBiol
23 백수연 Circularity problem in PharmRank validation  TopicSem

2013-08:
24 서희원 The Exomes of the NCI-60 Panel: A Genomic Resource for Cancer Biology and Systems Pharmacology     J.Club

2013-07:
12 백수연 PharmRank : Personal genome sequence-based pharmacogenomics drug ranking system for potential adverse drug reactions  Seminar
16 민병주 Genetic rearrangement induced by LCR block  SysBiol

2013-06:
17 서희원 Nine Bladder Cancer Cell Lines and its Chemo-resistance Profiles.  TopicSem
22 이수현 Performance of pharmacovigilance signal-detection algorithms for the FDA adverse event reporting system.     J.Club
24 서명의 Chromosomal rearrangement analysis of bone abnormality with CNP overexpression  TopicSem

2013-05:
08 김혜현 Demonstration of the CDISC Transformer (SDTM Transformer)  TopicSem
22 고인석 Review of A National Metadata Repository for Empirical Research in Germany  TopicSem
25 고인석 The ISO/IEC 11179 norm for metadata registries: Does it cover healthcare standards in empirical research?     J.Club
25 이계화 Genomic and Epigenomic Landscapes of Adult De Novo Acute Myeloid Leukemia  J.Club
29 서명의 Chromosomal rearrangement analysis of bone abnormality with CNP overexpression  TopicSem

2013-04:
01 이수현 Flow of study population selection and preliminary analysis result using standard nursing statement, lab test  TopicSem
06 임재현 COPD mRNA editing analysis scheme  SysBiol
17 김혜현 Demonstration of the CDISC Transformer (ODM Transformer)  TopicSem
18 김혜현 BEMSH Plan_metadata  BioEMR

2013-03:
02 김혜현 Lifelog Data Model and Management: Study on Research Challenges     J.Club
13 이수현 Distribution of study population and pilot test result using standard nursing statement  TopicSem
30 고인석 The effect of electronic medical record system sophistication on preventive healthcare for women  J.Club

2013-02:
04 이수현 Detection of Adverse Drug Reaction Signals Using Controlled Vocabularies_Comparison of the Standard Nursing Statement and Laboratory Test Ratio based on Observation Period.  TopicSem
04 윤준희 Genomancer: A secure, modular and distributed system for inter-preting personal genome in mobile smartphone environment     Seminar
04 박유랑 Metadata Registry based integration and transformation between openEHR archetype and HL7 template  Seminar
04 김혜현 CDISC Transformer metadata driven semi-automatic transformation of clinical research data to CDISC ODM  Seminar
05 이계화 Detection and annotation of candidate somatic mutations in Acute Myeloid Leukemia with whole exome sequencing  Seminar
05 백수연 MedCassandra : Drug and ADR ranking forecast system based on personal genomic variation  Seminar
05 조용래 Standard-based Retrieval System for Clinical Research from Data Warehouse  Seminar
09 윤준희 GenePING : secure, scalable management of personal genomic data  J.Club
23 조용래 PASTE: patient-centered SMS text tagging in a medication management system     J.Club
27 박유랑 CCR : Extended personal health record standard with semantic and syntactic compliance on the ASTM CCR.   TopicSem

2013-01:
26 이계화 Clonal evolution in relapsed acute myeloid leukemia revealed by whole genome sequencing     J.Club

2012-12:
08 강병희 Integration of External signaling Pathways with the Core Transctriptional Network in Embryonic Stem Cells  J.Club
12 조용래 HealthPro improvements for clinical term search  TopicSem
17 윤준희 Genomancer : Secure, modular and distributed system for interpreting personal genome in mobile smartphone environment  TopicSem
21 김혜현 15차 CCR & BioEMR 교수님과 회의   BioEMR
29 조용래 A pragmatic method for electronic medical record-based observational studies - developing an electronic medical records retrieval system for clinical research     J.Club
29 김도균 PheWAS: demonstrating the feasibility of a phenome-wide scan to discover gene-disease associations     J.Club

2012-11:
02 김혜현 13차 CCR & BioEMR 교수님과 회의   BioEMR
05 이수현 Drug Utilization Surveillance System (DUSS)  TopicSem
13 백수연 Statistics and improvement of drug and ADR ranking  xMutant
16 김혜현 Scenario for CCR & Dialysis demonstration including clinical meaning  BioEMR
17 이수연S Subnetwork-based analysis of chronic lymphocytic leukemia identi&     J.Club
19 윤준희 Demonstration of Genomancer  TopicSem
26 백수연 Drug rank in each therapeutic category and Validation scheme  TopicSem
30 김혜현 14차 CCR & BioEMR 교수님과 회의   BioEMR
30 조용래 Demonstration for HealthPro  BioEMR

2012-10:
19 김혜현 12차 CCR & BioEMR 교수님과 회의  BioEMR
24 이수현 Avatar team topic summary (Agent, Drug Surveillance System)  BioEMR
24 김혜현 Senario for data sharing demonstartion between CCR and DialysisNet   BioEMR
24 윤영조 DialysisNet, BioEMR App Implementation  BioEMR

2012-09:
01 김도균 Comprehensivemolecular characterization of human colon and rectal cancer     J.Club
03 김혜현 Diabetes Management by Social Network  TopicSem
07 김혜현 CCR & BioEMR 10차 프로젝트 미팅  BioEMR
18 백수연 Drug and ADR ranking algorithm and validation scheme  xMutant
19 백수연 MedCassandra : Personalized ADR ranking forecast system based on personal genomic variation.  TopicSem
19 김혜현 CDISC Transformer: meta-data and CDASH driven semi-automatic transformation of eCRF to CDISC ODM and SDTM model  TopicSem
22 백수연 Identification of chemogenomic features from drug-target interaction networks using interpretable classifiers.     J.Club
22 김혜현 CCR &BioEMR 11차 회의  BioEMR
26 임재현 Review for Encode(1) : An integrated encyclopedia of DNA elements in the human genome  SysBiol

2012-08:
04 조용래 Emerging Patient-Driven Health Care Models: An Examination of Health Social Networks, Consumer Personalized Medicine and Quantified Self-Tracking     J.Club
10 김혜현 CCR & BioEMR 9차 프로젝트 미팅   BioEMR
14 김혜현 Workflow for the CCR demonstration scenario   BioEMR
16 김혜현 Workflow for the CCR demonstration scenario - using Sever  BioEMR
21 윤영조 DialysisNet Server Implementation  BioEMR
27 백수연 Drug Information Retrieval System (DIR)  TopicSem
28 이계화 Design of the Breast Cancer Survivor Management Agent  BioEMR
28 이계화 mini_journal] Multimedia EMR  BioEMR
31 윤준희 Overview of Genomancer test version and Demo  SysBiol

2012-07:
06 박유랑 CCR & BioEMR 7차 프로젝트 미팅   BioEMR
10 백수연 improvement way of ADR ranking algorithm  xMutant
21 이수현 Large-scale prediction of adverse drug reactions using chemical, biological, and phenotypic properties of drugs     J.Club
23 백수연 MedCassandra – drug information integration for ADR ranking system  TopicSem
27 김혜현 CCR & BioEMR 8차 프로젝트 미팅   BioEMR

2012-06:
01 박유랑 CCR & BioEMR 5차 프로젝트 미팅  BioEMR
04 이수현 Dataset validation for ADRs analysis and nursing statements result  TopicSem
09 이계화 Operational implementation of Prospective Genotyping for Personalized Medicine: The Design of the Vanderbilt PREDICT Project     J.Club
11 임재현 Pipeline for RNAseq Analysis and scheme for R package  TopicSem
12 이수현 Drug-Side effect Network construction using nursing statement and lab data.   xMutant
20 정제균 Network-based assessement of gene similarity measures  TopicSem
22 박유랑 CCR & BioEMR 6차 프로젝트 미팅   BioEMR
23 김도균 A Mathematical Methodology for Determining the Temporal Order of Pathway Alterations Arising during Gliomagenesis     J.Club
25 백수연 MedCassandra : Personalized ADR ranking forecast system based on personal genomic variation  TopicSem

2012-05:
01 조용래 HealthPro DB Schema  BioEMR
07 백수연 comparing drug network based on chemical structure vs. gene expression profile simiarlity  xMutant
09 이수현 Construction of medication dataset and ADR analysis scheme   TopicSem
11 박유랑 CCR & BioEMR 4차 프로젝트 미팅   BioEMR
14 백수연 summary of chemical structure based drug repositioning & plan for expression profile based study  TopicSem
22 Rocky A systems-based approach to explore interrelationships between drug targets and microRNAs target genes in human cancers using NCI-60 cancer cell lines  xMutant
23 김혜현 Diabetes management by intervention as health avatar scenario  TopicSem

2012-04:
06 박유랑 CCR & BioEMR 2차 프로젝트 미팅  BioEMR
06 조용래 HealthPro DB Schema  BioEMR
25 조용래 Implementing Search Tool in integrating HealthWatch and BioEMR DB Schema  TopicSem
25 박유랑 CCR & BioEMR 3차 프로젝트 미팅   BioEMR
28 박유랑 Quality evaluation of value sets from cancer study common data elements using the UMLS semantic groups     J.Club

2012-03:
02 조용래 Search for Clinical Trial Data in BioEMR & Mapper Class in CCR Platform  BioEMR
10 정제균 A Systematic Survey of Loss-of-Function Variants in Human Protein-Coding Genes     J.Club
12 박유랑 MDR based semantic consistent exchange on clinical document  TopicSem
14 김도균 Knowledge enhancement through intronic miRNAs and target gene information for clinical outcome prediction  TopicSem
15 박유랑 CCR & BioEMR 1차 프로젝트 미팅  BioEMR
19 백수연 Using chemical structure similarity for drug repositioning  TopicSem
24 백수연 Systematic Drug Repositioning Based on Clinical Side-Effects     J.Club
26 김혜현 CDISC Transformer: meta-data driven semi-automatic transformation of eCRF to CDISC ODM and SDTM models  TopicSem
28 조용래 Search for Clinical Trial Data in BioEMR  TopicSem

2012-02:
01 윤준희 PGSeminar presentation overview  SysBiol
07 김지훈 Previous seminar summary & current seminar overview  Seminar
07 박찬희 Cluster File System and adjusting variant calling filtering option  Seminar
07 서희원 Stablishing phenotypic signatures to infer relevant phenotypic characteristics using semantic similarity calculation  Seminar
18 이수연 Systematic detection of putative tumor suppressor genes through the combined use of exome and transcriptome sequencing     J.Club
18 윤준희 Using text to build semantic networks for pharmacogenomics     J.Club
25 김도균 Association of BRCA1 and BRCA2 mutations with survival, chemotherapy sensitivity, and gene mutator phenotype in patients with ovarian cancer     J.Club

2012-01:
02 조용래 Implementing Search Tool for EAV Model of DB Schema in BioEMR  TopicSem
11 서희원 Semantic Map for Phenotypic Signature  SysBiol
19 윤영조 BioEMR Renewal plan  BioEMR
20 김혜현 Use of diverse electronic medical record systems to identify genetic risk for type 2 diabetes within a genome-wide association study     J.Club
25 서희원 Personal Genome Seminar Preview: Establishing phenotypic signatures to infer relevant phenotypic characteristics using semantic similarity calculation.  SysBiol
26 조용래 Search for Clinical Trial Data in BioEMR  BioEMR
30 서희원 Establishing phenotypic signatures to infer relevant phenotypic characteristics using semantic similarity calculation.  TopicSem

2011-12:
01 조용래 Search for Clinical Trial Data in BioEMR  BioEMR
01 윤영조 BioEMR Renewal Plan  BioEMR
03 이수연S Modelling schizophrenia using human induced pluripotent stem cells     J.Club
12 조용래 Implementing Search Tool for EAV Model of DB Schema in Clinical Trial Management System(BioEMR)  TopicSem
20 나영지 Disease scoring system based on sequencing data  MAInfo
26 나영지 Disease scoring system based on sequencing data  TopicSem
28 윤선민 Future study for improvement  SysBiol

2011-11:
02 박유랑 Method for measuring semantic interoperability   TopicSem
03 윤영조 Mobile Healthcare Information Management utilizing Cloud Computing and Android OS  BioEMR
09 조용래 Result for implementing search tool in BioEMR  TopicSem
14 정제균 Co-emergenece Measure of Multiple Disease Risks using Genome Variants  TopicSem
16 조용래 Problems for implementing search tool in BioEMR  BioEMR
16 윤선민 Problems of gene-disease-environment interaction network analysis  SysBiol
16 김혜현 [mini_j]eleMAP in eMERGE  BioEMR
22 서희원 Phenotypic signature using genomic variant annotation on semantic network.   SysBiol
23 서희원 Phenotypic signature using genomic variant annotation on semantic network.  TopicSem
25 조용래 Design architecture for implementing mapper class in Health Avatar platform  BioEMR
30 박유랑 MDR based clinical document exchange (Schematron 기반 구현)  TopicSem

2011-10:
05 조용래 Implementing risk prediction service  SysBiol
06 윤준희 Seminar review  SysBiol
08 이수현 Comparison of a basic and an advanced pharmacotherapy-related clinical decision support system in a hospital care setting in the Netherlands      J.Club
12 이수현 Signal detection of adverse drug reaction using standardized narrative statement on electronic nursing records  TopicSem
12 윤선민 PG Seminar preview  SysBiol
12 윤준희 Pharmacogenomics annotation seminar review  SysBiol
12 조용래 Implementing risk prediction service  SysBiol
13 김지훈 Previous seminar summary & current seminar overview  Seminar
13 조용래 Implementing risk prediction service  Seminar
17 조용래 BioEMR Incoporating Searching function like Healthwatch  TopicSem
19 정제균 co-emergenece of multiple diseases in genome  TopicSem
27 백수연 [mini-j] Strategy for establishing an effective Korean drug utilization review system  BioEMR

2011-09:
03 박유랑 Quality Evaluation of Cancer Study Common Data Elements Using the UMLS Semantic Network     J.Club
08 이수현 Comparison of a basic and an advanced pharmacotherapy-related clinical decision support system in a hospital care setting in the Netherlands   BioEMR
08 윤영조 BioEMR iPad Application Implementation  BioEMR
08 윤영조 BioEMR iPad Application Implementation_Workflow  BioEMR
21 박유랑 MDR based semantic consistent exchange on clinical document  TopicSem
24 서희원 S tructural variation in two human genomes mapped at single-nucleotide resolution by whole genome de novo assembly.     J.Club
28 조용래 Implementing risk prediction service  SysBiol
29 조용래 BioEMR Incoporating Searching function like Healthwatch  BioEMR

2011-08:
01 윤선민 The arrangement to extract environmental factors from PubMed articles  TopicSem
02 Rocky Database schema for miRNA variant annotation  MAInfo
06 김혜현 Sharing Data for Public Health Research by Members of an International Online Diabetes Social Network     J.Club
10 박유랑 Measuring semantic interoperability  TopicSem
10 Intern [SummerInternship]DecodeME  TopicSem
13 박유랑 Mapping clinical phenotype data elements to standardized metadata repositories and controlled terminologies: the eMERGE Network experience     J.Club

2011-07:
13 이수현 Progress of ADR signal detection using standardized nursing statement study   TopicSem
18 박유랑 MDR based clinical document exchange -openEHR archetype & HL7 Template  TopicSem

2011-06:
14 이수현 Health Avatars Agent (Drug Monitoring system)   BioEMR
15 박유랑 MDR based clinical document exchange -HL7 Template implementation-  TopicSem
22 한현욱 Mathematical Model & Layouts for network visualization   TopicSem

2011-05:
04 정제균 Comparison of Correlation Measurements between Genes in DNA Methylation and Gene Expression  TopicSem
09 김도균 Brainstorming on Integrative Genome Informatics (Research Topics from each member)  xMutant
14 이수현 A web-based quantitative signal detection system on adverse drug reaction in china     J.Club
21 이수연 miRGator v2.0 : an integrated system for functional investigation of microRNAs     J.Club
27 윤선민 systemetic validation result of ADR gene detection  SysBiol
28 김혜현 AGUIA: autonomous graphical user interface assembly for clinical trials semantic data services     J.Club

2011-04:
02 김지훈 Improving disease gene prioritization using the semantic similarity of Gene Ontology terms       J.Club
09 박유랑 The military health system`s personal health record pilot with Microsoft HealthVault and Google Health     J.Club
13 정제균 Measurement of Correlation between Genes in DNA Methylation and Gene Expression  TopicSem
19 백수연 [mini-j] Adverse drug reactions - definitions, diagnosis, and management  BioEMR
23 송영수 Targeted next-generation sequencing detects point mutations, insertions, deletions and balanced chromosomal rearrangements as well as identifies novel leukemia-specific fusion genes in a single proced     J.Club
30 서희원 Population sequencing of two endocannabinoid metabolic genes identifies rare and common regulatory variants associated with extreme obesity and metabolite level.      J.Club

2011-03:
07 이수현 Distribution of standardized nursing statement as ADR signal in Rosiglitazone group   TopicSem
09 박유랑 Achieving semantic interoperability in clinical and biomedical domain based on an international metadata description and registration standard   TopicSem
09 송영수 Development of Measurement of Genomic Similarity between Human Individuals  TopicSem
11 나영지 Problems in manipulating large scale NGS data   MAInfo
14 김지훈 To improve the semantic signature work  TopicSem
15 송영수 Targeted next-generation sequencing detects point mutations, insertions, deletions and balanced chromosomal rearrangements as well as identifies novel leukemia-specific fusion genes in a single proced  MAInfo
29 조용래 HealthWatch : Online Analysis System Based On Datawarehouse using Healthcare Data.  BioEMR

2011-02:
07 이수연S Keyword search for Microarray data using evoc term as stemming  TopicSem
14 이수현 Distribution of standardized nursing statement sets in diabetes medications   TopicSem
16 박유랑 Metadata distance network by semantic similarity  TopicSem
19 박유랑 NINDS common data element project: a long-awaited breakthrough in streamlining trials.     J.Club

2011-01:
03 박유랑 Development of semantic similarity based metadata distance measure  TopicSem
03 송영수 Immunoglobulin Gene Rearrangement: A Useful Marker in Personalized Medecine?  TopicSem
08 박유랑 Approaching semantic interoperability in Health Level Seven     J.Club
15 김혜현 The UMLS-CORE project: a study of the problem list terminologies used in large healthcare institutions      J.Club
19 이수현 ADR signal detection using standardized nursing statement  TopicSem

2010-12:
07 이수연S Keyword search for Microarray data using evoc term as stemmng  xMutant
08 박유랑 Semantic similarity based metadata clustering  TopicSem
09 조용래 BioEMR Technology Transfer  BioEMR
13 이수연S Keyword search for Microarray data using evoc term as stemming  Seminar
14 나영지 Problems in manipulating large scale NGS data  MAInfo
18 나영지 Computational identification of tissue-specific alternative splicing elements in mouse genes from RNA-Seq     J.Club

2010-11:
01 윤선민 Flow chart for analysis system  Seminar
03 강기원 Detection of acute adverse drug reactions in clopidogrel through system using incidence density ratio(IDR) in electronic medical records   TopicSem
10 박찬희 Select killer item on writing manuscript   TopicSem
12 이수연S porter stemming  xMutant
12 이수연S porter stemming   xMutant
17 이수연S Keyword search for Microarray data using evoc term as stemming  TopicSem
19 이수연S Keyword search for Microarray data using evoc term as stemming  xMutant
20 강기원 Epigenetic Epidemiology of Common Complex Disease: Prospects for Prediction, Prevention, and Treatment     J.Club
22 김도균 Review on genomic rearrangement in cancer  Seminar
24 윤선민 Pathway analysis of member genes for functional annotation  TopicSem
29 정희준 System architecture and analysis flow for AXP  Seminar
30 Rocky A practical, bioinformatic workflow system for large data sets generated by next-generation sequencing     MAInfo

2010-10:
02 김혜현 Heterogeneity prevails: the state of clinical trial data management in Europe - results of a survey of ECRIN centres     J.Club
04 이수연S Email and week presentation  Seminar
09 박유랑 Scaling the walls of discovery: using semantic metadata for integrative problem solving     J.Club
16 정희준 Systematic analysis, comparison, and integration of disease based human genetic association data and mouse genetic phenotypic information     J.Club
24 윤선민 empty file list among adf text  xMutant
25 윤영조 CHMR v3.0 - Variable Data Element  Seminar
31 윤선민 temp_seminar  SysBiol

2010-09:
03 서희원 Project Management System  BioEMR
06 서희원 Project Management System  Seminar
16 송영수 HyBrow: a prototype system for computer-aided hypothesis evaluation  BioEMR
18 송영수 HyBrow: a prototype system for computer-aided hypothesis evaluation     J.Club
29 이수연S plan for make a stemcell database using GEO data  TopicSem

2010-08:
06 윤영조 CHMR v3.0 Implementation 추가사항  BioEMR
07 윤선민 GeneMesh: a web-based microarray analysis tool for relating differentially expressed genes to MeSH terms     J.Club
09 윤영조 CHMR v3.0 Implementation  Seminar
13 서희원 CCR Plus Database Schema     BioEMR
14 강기원 Mining consequence events in temporal health data     J.Club
20 서희원 RE:CCR Plus Database Schema  BioEMR
21 이수연S Recent developments in StemBase: a tool to study gene expression in human and murine stem cells.     J.Club
23 나영지 AnsNGS - Annotation System of structural variation for Next Generation Sequencing data  Seminar

2010-07:
06 나영지 Annotation System of structural variation for Next Generation Sequencing data  MAInfo
09 박유랑 MINI-J Semantic web data warehousing for caGrid     BioEMR
09 윤영조 BMESH v3.0 Implementation  BioEMR
10 박유랑 Semantic web data warehousing for caGrid     J.Club
26 윤영조 CHMR v3.0 Implementation  Seminar

2010-06:
01 나영지 AnsNGS - Annotation System of structural variation for Next Generation Sequencing data  MAInfo
03 나영지 AnsNGS: Annotation System of structural variation for Next Generation Sequencing data  Seminar
03 박유랑 Biomedical Metadata Element Standard for Health  Seminar
08 Rocky MicroRNA Discovery and Profiling in Human Embryonic Stem Cells by Deep Sequencing of Small RNA Libraries  MAInfo
10 변상재 Bi-directional semantic similarity of gene products based on Gene Ontology  Seminar
11 윤영조 Developing data content specifications for the Nationwide Health Information Network Trial Implementations  BioEMR
19 Rocky Genome-Wide Analysis of Small RNA and Novel MicroRNA Discovery in Human Acute Lymphoblastic Leukemia Based on Extensive Sequencing Approach     J.Club
26 송영수 caTIES: a grid based system for coding and retrieval of surgical pathology reports and tissue specimens in support of translational research     J.Club

2010-05:
03 박유랑 CCR implementation plan in Smartphone  Seminar
03 정희준 Item for AXP III  Seminar
08 Rocky Discovery of Novel MicroRNAs in Female Reproductive Tract Using Next Generation Sequencing     J.Club
10 나영지 AnsNGS: Annotation System of structural variation for Next Generation Sequencing data  Seminar
14 조용래 BioEMR Conduct Modification  BioEMR
17 박유랑 EMR 서식에서 메타데이터 추출 계획  Seminar
19 이수연 Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing tech. for measuring differential microRNA expression     MAInfo
22 강기원 A strategy for predicting the chemosensitivity of human cancers and its application to drug discovery     J.Club
28 조용래 CCR (Networking between PC Bluetooth, CCR Interface, BioEMR Progress)  BioEMR

2010-04:
02 박유랑 A metadata approach for clinical data management in translational genomics studies in breast cancer.  BioEMR
03 송영수 Statistical search on the Semantic Web     J.Club
12 박유랑 BioEMR 팀 진행점검  Seminar
12 나영지 Annotation System for Next Generation Sequencing data (AnsNGS)  Seminar
14 변상재 Design and implementation of a generalized sequence data model - motivation  MAInfo
14 나영지 Annotation System for Next Generation Sequencing data  MAInfo
14 Rocky De Novo Genome Assembly using Paired-End Short Reads  MAInfo
15 한현욱 Requriement Analysis of Pathway Systems_revision  SysBiol
17 정희준 HPD: an online integrated human pathway database enabling systems biology studies     J.Club
17 한현욱 Requriement Analysis of Pathway Systems_revision II  SysBiol
19 나영지 AnsNGS: Annotation System of structural variation for Next Generation Sequencing data  Seminar
19 조용래 HPD: an online integrated human pathway database enabling systems biology studies  SysBiol
23 윤영조 Web_GIS_in_practice_VIII_HTML5_and_the_canvas_element_for_interactive_online_mapping  BioEMR
24 박유랑 A metadata approach for clinical data management in translational genomics studies in breast cancer.     J.Club
27 Rocky Sequence assembly using paired-end short tags   MAInfo
28 한현욱 ArrayXPathIII Database Schema  SysBiol
29 조용래 The ArrayXPathIII Database Schema Ver1.0  SysBiol

2010-03:
08 윤영조 BMESH Implementation CHMR v3 Detail  Seminar
13 박유랑 The Enterprise Data Trust at Mayo Clinic: a semantically integrated warehouse of biomedical data     J.Club
19 박유랑 Vocabulary based automatic semantic annotator on metadata (Proposal)  BioEMR
22 박유랑 Vocabulary based automatic semantic annotator on metadata  Seminar
29 박유랑 Vocabulary based automatic semantic annotator on metadata  Seminar

2010-02:
01 나영지 Replication plan: DNA sequencing of a cytogenetically normal acute myeloid leukemia genome  Seminar
01 윤영조 BMESH Implementation CHMR v3  Seminar
04 이수현 Implementation of web-based analysis program using EMR data  BioEMR
04 조용래 The systems biology graphical notation review(progress) complement  SysBiol
08 정희준 Review SBGN for PathViz and think about killer item  Seminar
08 이수현 Implementation of web-based analysis program using EMR data  Seminar
16 이수현 The MGED Ontology: a resource for semantics-based description of microarray experiments  xMutant
16 정희준 Item for PathTest, PathComp  Seminar
20 김도균 Prediction of Human Functional Genetic Networks from Heterogeneous Data Using RVM-Based Ensemble Learning     J.Club

2010-01:
11 변상재 Next Generation Sequencing Data: Data management and application  Seminar
11 조용래 How to handle EMR Data at the DataMart for clinical research  Seminar
15 조용래 Visualization Tools inquiry and improvement(ver.3)  SysBiol
16 Rocky In silico method for systematic analysis of feature importance in microRNA-mRNA interactions     J.Club
18 정희준 Plan and summary ArrayXPath sub systems  Seminar
18 박유랑 BMESH : Semantic infrastructure  Seminar
18 박정수 Gene profiling of the the primary prostate tumors to find the correlation between Gleason grading system and androgen independent state in prostate cancer  Seminar
18 박유랑 BMESH: Semantic infrastructure  BioEMR
30 정희준 PathCase: pathways database system  J.Club

2009-12:
07 박찬희 Open GRIP Improvement  Seminar
07 조용래 Using EMR data for clinical research  Seminar
14 조용래 Using EMR data for clinical research  Seminar
19 송영수 Standards to Support Information Systems Integration in Anatomic Pathology     J.Club
21 박찬희 Path Based System  Seminar
21 조용래 A plan to extract DEs of CRF and EMR  Seminar
28 나영지 High-throughput sequence analysis: work flows and data management  Seminar
28 박찬희 Path Based System  Seminar
30 송영수 Ontology-based integration of cDNA and tissue microarray database management system  Seminar

2009-11:
07 Rocky ArrayMining: a modular web-application for microarray analysis combining ensemble and consensus methods with cross-study normalization     J.Club
14 송영수 Application and evaluation of automated semantic annotation of gene expression experiments     J.Club
21 강기원 Genomic signatures to guide the use of chemotherapeutics     J.Club
23 나영지 Possibility of involvement of pre-miRNA secondary structure into mature miRNA function  Seminar

2009-10:
10 박찬희 The effects of probe binding affinity differences on gene expression measurements and how to deal with them     J.Club
14 나영지 Destroying the degree of correlation between memberships in a pre-miR structure cluster  Seminar

2009-09:
03 송영수 Xperanto-Semantics : Ontology-Based Integration of Tissue Microarray and cDNA Database Management System  Seminar
05 심혜진 Corpus-based and Knowledge-based Measures of Text Semantic Similarity     J.Club
09 정희준 Developing Decision Support Systems in Clinical Bioinformatics  BookReading
12 정희준 A semantic web approach to biological pathwa data reasoning and integration     J.Club
12 이수연 TargetMiner: MicroRNA target prediction with systematic identification of tissue specific negative example     J.Club
21 송영수 Ontology-Based Integration of Tissue Microarray and cDNA Database Management System  Seminar
26 변상재 Semantic Similarity in Biomedical Ontologies     J.Club
28 나영지 Possibility of involvement of pre-miRNA secondary structure into target function  Seminar

2009-08:
17 심혜진 An extended measure of wangs sematic similarity measure in GO  Seminar
29 박유랑 Bridging real world semantics to model world semantics for taxonomy based knowledge representation system     J.Club
31 심혜진 Reconsideration of the Semantic Value  Seminar

2009-07:
04 김도균 MIMAS 3.0 is a Multiomics Information Management and Annotation System     J.Club
06 박유랑 Metadata based semantic and syntactic enrichment method in HL7 CDA  Seminar
13 변상재 Comparison of Ontology-based Semantic-Similarity Measures-new data : GDS 2577  Seminar
30 변상재 Comparison of Ontology-based Semantic-Similarity Measures-new data : GDS 2577  Seminar

2009-06:
01 정희준 MetaPath: an implementation of meta-database for biological pathway  Seminar
01 강기원 missing value management & factor score  Seminar
13 강기원 Novel integration of hospital electronic medical records and gene expression measurements to identify genetic markers of maturation     J.Club
29 김도균 Xperanto-SNP: A web-based integrated management system for genetical genomics (Adding DACE module)  Seminar

2009-05:
04 변상재 Semantic similarity evaluation ?F test  Seminar
07 김도균 Progress in Xperanto-SNP : Genotyping and detecting copy number modules embedded  Seminar
11 이수연 Stem cell microRNA microarray analysis - modify xperanto SOM cluster analysis module  Seminar
11 박유랑 BioEMR version 3.0 계획  Seminar
14 강기원 Scale mistake and Outlier problem  Seminar
23 변상재 A relation based measure of semantic similarity for Gene Ontology annotations.     J.Club
25 김도균 Integration of multidimensional genomic data: Schematic overview  Seminar
28 이수연 stem cell miRNA microarray analysis - GO annotation in xperanto  Seminar
30 박찬희 Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues     J.Club

2009-04:
06 박유랑 BMESH (Biomedical Metadata Element Standard for Health) - 2  Seminar
11 박유랑 Clinical Research Informatics: Challenges, Opportunities and Definition for an Emerging Domain [Clinical Research]    J.Club
14 변상재 Correlation between Gene Expression and GO Semantic Similarity     TopicSem
23 이수연 Stem cell miRNA microarray analysis  Seminar
25 송영수 Cruella Developing a Scalable Tissue Microarray Data Management System     J.Club

2009-03:
14 송영수 Bio2RDF: Towards a mashup to build bioinformatics knowledge systems     J.Club
21 조성범 Gene expression trends and protein features effectively complement each other in gene function prediction     J.Club
23 박유랑 Biomedical Metadata Element Standard for Health  Seminar

2009-02:
02 심혜진 Expand Wang’s semantic similarity measure  Seminar
07 김도균 SIGMA2: A system for the integrative genomic multi-dimensilnal analysis of cancer genomes, epigenomes, and transcriptomes     J.Club
09 박유랑 BioEMR 관련연구  Seminar
12 김도균 Upgrade ChromoViz-web: Implementation simplified SIGMA2 with advanced GRIP (Refine Idea)  Seminar
26 박유랑 BioEMR extractor -CDA-  Seminar

2009-01:
03 정희준 Systematic reconstruction of TRANSPATH data into cell system markup language       J.Club
03 송영수 A system for sharing routine surgical pathology specimens across institutions: the Shared Pathology Informatics Network     J.Club
05 박유랑 BioEMR (Display & Subgroup)  Seminar
19 박유랑 BioEMR Multi-center CTMS  Seminar
29 송영수 TMA-TAB Implementation : Review on Process of Data Insertion  Seminar
31 박유랑 The Common Data Elements for cancer research: remarks on functions and structure.     J.Club

2008-12:
04 강기원 Biological age measurement  Seminar
04 송영수 TMA-TMA implementation in organs other than colon  Seminar
27 변상재 Correlation between Gene Expression and GO Semantic Similarity     J.Club

2008-11:
01 송영수 Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHE)     J.Club
06 박유랑 BioEMR 구현 완료 및 시나리오 적용  Seminar
15 박유랑 Auditing the Semantic Completeness of SNOMED CT Using Formal Concept Analysis     J.Club
17 송영수 TMA-TAB implementation: processing of user-defined terms  Seminar
24 변상재 Semantic Similarity Measure evaluation using sequence similarity  Seminar
27 박유랑 BioEMR 실전 시나리오  Seminar
29 변상재 An ontology-driven semantic mashup of gene and biological pathway     J.Club
29 송영수 Synoptic tool for reporting of hematological and lymphoid neoplasms based on World Health Organization classification and College of American Pathologists checklist.     J.Club

2008-10:
02 박유랑 BioEMR 구현발표  Seminar
04 김도균 Clinically driven semi-supervised class discovery in gene expression data     J.Club
06 김지훈 Lattice on BMA semantic space  Seminar
09 송영수 TMA-TAB implementation in colon cancer  Seminar
11 이수연 The roles of binding site arrangement and combinatorial targeting in microRNA repression of gene expression     J.Club
18 나영지 Removal of AU Bias from Microarray mRNA Expression Data Enhances Computational Identification of Active MicroRNAs     J.Club
18 변상재 Metrics for GO based protein semantic similarity: a systematic evaluation     J.Club
20 박유랑 BioEMR 구현 및 계획  Seminar
23 김지훈 Lattices on BMA semantic space  Seminar
27 송영수 TMA-TAB implementation with five scenario  Seminar

2008-09:
01 김지훈 Evaluation plan for term-wise and geneset-wise semantic measure  Seminar
01 송영수 TMA-TAB : Implementation in Xperanto-TMA  Seminar
04 변상재 A database system for analysis result of microarray data  Seminar
11 박유랑 DTS review, BioEMR 구현  Seminar
22 송영수 TMA-TAB implementation : Progress  Seminar
25 김지훈 Evaluation of semantic measure I  Seminar

2008-08:
04 양웅철 Measuring semantic similarity between sets of GO terms  Seminar
09 나영지 Novel MicroRNA Candidates and miRNA-mRNA Pairs in Embryonic Stem (ES) Cells     J.Club
11 박유랑 BioEMR 구현계획(6) - Class diagram & UI 구현-  Seminar
14 김지훈 Application of a new geneset-wise measure for building semantic space  Seminar
16 송영수 Integrative mathematical oncology     J.Club
21 변상재 A database system for analysis result of microarray data : plan(2)  Seminar
25 박유랑 BioEMR 구현계획(7) -Class diagram 구현-  Seminar
30 박유랑 semCDI: A Query Formulation for Semantic Data Integration in caBIG       J.Club

2008-07:
03 김지훈 BioCLASS : Semantic space checks  Seminar
05 박유랑 A semantic grid infrastructure enabling integrated access and analysis of multilevel biomedical data in support of postgenomic clinical trials on cancer.     J.Club
14 김지훈 BioCLASS-Biological Concept Lattice on Annotated Semantic Space  Seminar
17 양웅철 BioCLASS : improving semantic space  Seminar
28 김지훈 Semantic distance distribution for re-selected geneset  Seminar
31 변상재 A database system for analysis result of microarray data : plan  Seminar

2008-06:
30 박유랑 BioEMR 구현계획(5) - DB schema & Class diagram-  Seminar

2008-05:
02 박유랑 BioEMR 구현계획(3) -요건분석-  Seminar
24 조성범 Predicting cancer involvement of genes from heterogeneous data     J.Club
26 박유랑 BioEMR 구현계획(4) -Interface design & DB schema-  Seminar

2008-04:
04 박유랑 BioEMR 구현 계획 (1)  Seminar
12 박유랑 Epoch: an Ontological Framework to Support Clinical Trials Management     J.Club
18 박유랑 BioEMR 구현 계획 (2) -Project 수행-  Seminar
19 김도균 SNPLims: a data management system for genome wide association studies     J.Club

2008-03:
08 나영지 Systematic functional characterization of cis-regulatory motifs in human core promoters     J.Club
10 김도균 ADRSNP system(약물이상반응 유전체연구) [약물유전체] Seminar

2008-02:
16 조성범 Successful anti-cancer drug targets able to pass FDA review demonstrate the identifiable signature distince from the signatures of random genes and initially proposed targets     J.Club
19 변상재 Biochemical Network Database implementation  Seminar
26 김민구 Second stalemate in RiPeter  Seminar
29 박유랑 BioEMR 2008 (계획)  Seminar

2008-01:
19 김민구 Novel Integration of Hospital Electronic Medical Records and Gene Expression Measurements to Identify Genetic Markers of Maturation     J.Club
29 나영지 Overview of Affymetrix GeneChip Gene 1.0 ST Array System  Seminar

2007-12:
01 박유랑 Use of SNOMED CT to Represent Clinical Research Data: A Semantic Characterization of Data Items on Case Report Forms in Vasculitis Research     J.Club
11 김지훈 Current issues on semantic similarity in Bioinformatics  Seminar
22 변상재 BNDB-The Biochemical Network Database     J.Club
28 김지훈 BioCLASS : A semantic comparison of microarray gene expression data  Seminar

2007-11:
03 김지훈 BioCLASS : A semantic comparison of microarray gene expression data  J.Club
03 정희준 An architecture for biomedical semantic map: an integrated map from biology to clinical  J.Club
03 김도균 An integrated system for heterogeneous data management and analysis  J.Club
16 박유랑 Project (BioEMR & Cohort) progress  Seminar
20 조성범 Analysis of gene set interaction network structure using SEM  Seminar
23 변상재 Synovial mesenchymal stem cell analysis  Seminar
24 정희준 PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation       J.Club
27 김도균 An integrated system for heterogeneous data management and analysis  Seminar

2007-10:
02 박원준 Rich Client Web BioCANDI - Initialization and Requirements  Seminar
12 정희준 Sematic integration (My approach)  Seminar
13 정희준 Advancing translational research with the Semantic Web  J.Club
13 김민구 A systems biology approach for pathway level analysis     J.Club
26 정희준 Semantic integration (refine idea)  Seminar
30 박유랑 BioEMR & Cohort Progress  Seminar

2007-09:
05 박유랑 Temporal DB review - I  Seminar
05 정희준 Semantic integration  Seminar
07 김지훈 geneset extension for semantic distance  Seminar
18 김민구 RiPeter in empirical and bayesian approach  Seminar
21 박유랑 Temporal DB Review 2  Seminar
21 정희준 Semantic integration  Seminar

2007-08:
01 박유랑 BioEMR: Project manager (XPERANTO/TMA 연결작업)  Seminar
08 김도균 Xperanto-SNP (A web-based integrated system for SNP data management and analysis) [SNP, database, Xperanto-SNP] Seminar
11 김지훈 A New Method to Measure the Semantic Similarity of GO terms     J.Club
18 조성범 Matrix formalism to describe functional state of trasncriptional regulatory systems     J.Club
18 정희준 Semantic Search among Heterogeneous Biological Databases Based on Gene Ontology [Semantic integration]    J.Club
22 정희준 Sematic integration  Seminar

2007-07:
06 김도균 Work plan: Integrated SNP database and Analysis system [SNP, CNV, system] Seminar
13 박유랑 BioEMR : Project manager  Seminar
21 박유랑 Design aspects of a distributed clinical trials information system       J.Club

2007-06:
02 정용 MicroGen: a MIAME compliant web system for microarray experiment information and workflow management [MIAME, microarray, repository]      J.Club
15 김지훈 BioCLASS : Biological Concept Lattice on Annotated Semantic Space  Seminar
27 박유랑 BioEMR:Progress  Seminar

2007-05:
12 박유랑 Dynamic Tables: An Architecture for Managing Evolving, Heterogeneous Biomedical Data in Relational Database Management Systems     J.Club
18 박유랑 BioEMR : Experimental Metadata repository  Seminar
19 김민구 A genome-wide analysis in Saccharomyces cerevisiae demonstrates the influence of chromatin modifiers on transcription       J.Club
25 김지훈 CLASS : Concept Lattice on Annotated Semantic Space  Seminar
26 정태수 Discovery of principles of nature from mathematical modeling of DNA microarray data     J.Club
30 정용 GEOXperanto improvement status [GEOXperanto, MGED Ontology, BioCANDI, term mapping] Seminar

2007-04:
04 김민구 EM Learning [EM] Seminar
07 정용 ArrayQuest: a web resource for the analysis of DNA microarray data [Microarray data analysis system]    J.Club
27 박유랑 BioEMR : Experimental metadata manager  Seminar

2007-03:
09 김도균 Detect CNVs using GEMCA [CNV, GEMCA] Seminar
10 나영지 Global analysis of microRNA target gene expression reveals that miRNA targets are lower expressed in mature mouse and Drosophila tissues than in the embryos       J.Club
16 박유랑 BioEMR Project 진행사항 [BioEMR] Seminar
17 박유랑 A general temporal data model and the structured population event history register [Temporal model, Metadata]    J.Club

2007-02:
21 정용 GEOXperanto Final [GEOXperanto, Schema integration, GEORetrieval] Seminar

2007-01:
12 박찬희 50000 * 50000 memory allocation using global arrays  Seminar
17 김지훈 semantic similarity between concepts in lattice with human pathways  Seminar
20 박유랑 The CAP cancer protocols--a case study of caCORE based data standards implementation to integrate with the Cancer Biomedical Informatics Grid. [caCORE, CAP cancer protocol]      J.Club

2006-12:
06 김지훈 semantic similarity between concepts in lattice with pathways  Seminar
08 김도균 System outline from Affy 500K SNP chip data [SNP, 500K] Seminar
27 김지훈 semantic similarity between concepts in lattice with pathways II  Seminar
29 김도균 Annotation system for Korean population data [SNP, 500k, system] Seminar

2006-11:
04 김민구 Predicting rules on organization of cis-regulatory elements, taking the order of elements into account       J.Club
04 김지훈 A new measure for functional similarity of gene products based on Gene Ontology [semantic map]      J.Club
13 김지훈 Semantic similarity between concepts in lattices  Seminar

2006-10:
14 정희준 BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments.     J.Club
18 박찬희 GRIP Problem when auto-update  Seminar

2006-09:
30 김지훈 Assessing semantic similarity measures for the characterization of human regulatory pathways [Semantic distance]      J.Club

2006-07:
04 박유랑 [BioEMR]General form builder [BioEMR] BioEMR
08 온정헌 A Systems Approach to Mapping DNA Damage Response Pathways [DNA damage response pathway]      J.Club
12 정용 Primary schema & Extended schemata status [Platform, GEO feature, mapping] xMutant
15 김민구 Identification of biochemical networks by S-tree based genetic programming       J.Club
15 나영지 A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies       J.Club

2006-06:
05 정희준 Review pathway systems  Seminar
10 나영지 The model organism as a system:integrating ‘omics’ data sets       J.Club
17 김지훈 From XML to RDF: how semantic web technologies will change the design of omic standards [XML RDF]      J.Club
17 박유랑 A System for Automated Lexical Mapping [LOINC mapping, text mining]      J.Club
20 박유랑 BioEMR project: General form creator & registry [BioEMR, Template] BioEMR
24 정태수 Reconstructing the pathways of a cellular system from genome-scale signals by using matrix and tensor computations [pathway, EVD]      J.Club
29 정용 Remaking extended schemata & result of mapping to primary schema [in situ oligo, mappping result, GEO] SysBiol

2006-05:
03 박유랑 CTMS (Clinical Trial Management System) 개발 계획  xMutant
06 우정훈 Complex trait analysis of gene expression uncovers polygenic and pleiotropic networks that modulate nervous system function. [genetical genomics]      J.Club
09 이혜원 Progress in developing template in Xperanto-TMA  BioEMR
20 김지훈 A System Based Approach to Interpret Dose and Time-dependent Microarray Data: Quantitative Integration of GO Ontology Analysis for Risk Assessment [microarray]      J.Club

2006-04:
01 박유랑 An XML-based System for Synthesis of Data from Disparate Databases     J.Club
11 박유랑 BioEMR 프로젝트 진행계획 및 유방암센터 임상자료 Viewer 개발 　  BioEMR
13 김민구 Temporal relation between GO  SysBiol

2006-03:
02 김도균 Implementation ChromiViz for integration with bioCANDi 　  BioEMR
08 박유랑 유방암센터 EMR 자료 분석  xMutant

2006-02:
01 한미령 Cancer Stem Cells  MAInfo
07 박유랑 Review of Knowledge Management System  xMutant
11 이혜원 Chemical Effects in Biological Systems (CEBS) object model for toxicology data, SysTox-OM: design and application.       J.Club

2006-01:
05 윤혜성 Comments and Improvements of proposing method 　  BioEMR
13 정희준 ArrayXPathIII: Implementation of Mutual Information  SysBiol
19 이혜원 Xperanto-TMA: implementation for applying templates  BioEMR
23 김도균 ChromoViz implementation for BioCANDi  Seminar
23 박유랑 GOChase 2: a framework for correcting semantic inconsistent annotation and improving accuracy of the functional analysis based on Gene Ontology  Seminar

2005-12:
06 김민구 Cluster viewer demonstration  xMutant
13 이혜원 Xperanto-TMA: Templates and Data Elements  xMutant
15 윤혜성 An Evolutionary Approach for Clustering Problem in Data Mining  BioEMR
28 김미현 학위 논문 정리-supplementary site 정리  MAInfo
28 우정훈 mesenchymal stem cell 분석 진행상황  MAInfo

2005-11:
01 우정훈 Estimate genetic subnetwork with SEM  xMutant
09 우정훈 Problem solving in GIST data  MAInfo
15 우정훈 Get over biological problem in statistical microarray analysis  xMutant
21 박유랑 Meta-data registry & a system for clinical trial  Seminar

2005-10:
08 온정헌 Validation and refinement of gene-regulatory pathways on a network of physical interactions     J.Club
20 유방암센터 BioEMR  BioEMR
27 윤혜성 Heterogeneous Ensemble  BioEMR
29 정희준 A network-based analysis of systemic inflammation in humans       J.Club

2005-09:
03 박유랑 Ontological analysis of gene expression data current tools, limitations, and open problems       J.Club
08 윤혜성 The problem of combining multiple partitions of a set of objects  BioEMR
24 윤혜성 Ensemble dependence model for classification and prediction of cancer and normal gene expression data       J.Club
26 김민구 Cluster viewer demonstration  Seminar
29 윤혜성 Decision tree based ensemble methods  BioEMR

2005-08:
04 윤혜성 Heterogeneous Ensemble  BioEMR
09 우정훈 Existing and emerging toxicogenomics databases  xMutant
13 나영지 Use of extreme patient samples for outcome prediction from gene expression data       J.Club
22 김도균 ChromoViz Implementation as a web-based software  Seminar
27 박찬희 PhD: a web database application for phenotype data management       J.Club

2005-07:
01 김민구 Temporal relation between GO terms  SysBiol
02 정태수 Supervised enzyme network inference from the integration of genomic data and chemical information [vert, kernel]      J.Club
09 박찬희 LitMiner and WikiGene: identifying problem-related key players of gene regulation using publication abstracts.       J.Club
15 윤혜성 Heterogeneous Ensemble  SysBiol

2005-06:
03 윤혜성 Cluster Ensemble and Its Applications in Gene Expression Analysis  SysBiol
04 조성범 Pattern Robustness of Diagnostic Gene expression Signatures in Leukemia       J.Club
17 김옥구 Microarray Analysis Component 간 자료표현 XML Schema 개발  SysBiol
18 김미현 Application of Revised Version of Neural Independent Component Analysis to Classification Problems of Confiscated Methaphetamine       J.Club
27 박유랑 BioEMR 프로젝트 진행사항 - Clinical data storage [ClinInfo] Seminar
27 박유랑 BioEMR 프로젝트 진행사항 ? Clinical data storage  BioEMR

2005-05:
06 정희준 Item sets for newGRIP  SysBiol
16 박유랑 BioEMR 프로젝트 진행계획 [ClinInfo] Seminar
16 박유랑 BioEMR 프로젝트 진행계획  BioEMR
19 박유랑 BioEMR 프로젝트: clinical data storage  BioEMR
21 박찬희 RNA expression microarrays (REMs), a high-throughput method to measure differences in gene expression in diverse biological samples       J.Club
26 권혜진 BioEMR 진행계획(제 2 세부과제)  BioEMR
28 정희준 GeneWays: a system for extracting, analyzing, visualizing,and integrating molecular pathway data       J.Club

2005-04:
07 황기태 BioEMR 프로젝트 관련 유방암 센터 발표  BioEMR
28 김세영 Comprehensive Solution to the XMLtoRelational Mapping Problem  BioEMR
30 박유랑 Genomic Messaging System and DNA Mark-Up Language for Information-Based Personalized Medicine with Clinical and Proteome Research Applications       J.Club

2005-03:
07 박유랑 Generating XML schemas for DICOM structured reporting templates.       J.Club
08 박유랑 Common Data Element(CDE)의 저장 포맷(ISO 11179)과 HL7 Template의 최신 동향  BioEMR
16 정태수 Complete report templete for microarray data analysis  MAInfo
17 김민구 FESD: a Functional Element SNPs Database in human  SysBiol
24 이혜원 Xperanto-TMA system 개발 진행사항  BioEMR
24 윤혜성 Approaches to Discover Emerging Patterns in bio-data  SysBiol

2005-02:
24 윤혜성 Application of emerging patterns for multi-source data classification and analysis  SysBiol
26 박유랑 Implementation of Cancer Genomics Object Model [ClinInfo] Seminar

2005-01:
10 김지훈 A function-based framework for understanding biological systems     J.Club
12 윤혜성 Discover emerging patterns in multi-source data  MAInfo

2004-12:
11 정태수 Systematic benchmarking of microarray data classification: assessing the role of non-linearity and dimensionality reduction       J.Club
23 정희준 Items of ArrayXPath 2.0  SysBiol
27 이혜원 The ArrayExpress Gene Expression Database: a Software Engineering and implementation Perspective       J.Club

2004-10:
12 서화정 Implementation of XML-based clinical document as standard for communication  BioEMR
16 김민구 Discovering Local Structure in Gene Expression Data: The Order-Preserving Submatrix Problem       J.Club
21 한미령 Possibility of systematic Multiple-pathways  SysBiol
23 서화정 A standard XML Schema for computerised anaesthetic records       J.Club
30 이혜원 CEBS object model for systems biology data, SysBio-OM       J.Club

2004-09:
04 이혜원 The tissue microarray data exchange specification: implementation by the Cooperative Prostate Cancer Tissue Resource.       J.Club

2004-08:
14 서화정 XML-based application interface services - a method to enhance integrability of disease specific systems       J.Club

2004-07:
10 윤혜성 How (not) to protect genomic data privacy in a distributed network: using trail re-identification to evaluate and design anonymity protection systems.       J.Club
20 박유랑 Integration of MAGE-OM and CDA using CDE (create template [Xperanto] Seminar

2004-06:
08 박유랑 Integrating MAGE-OM and CDA using CDE (first step: generating HL7 Template) [ClinInfo] Seminar
28 박유랑 Integrating MAGE-OM and CDA using CDE(Generating Template) 　  BioEMR

2004-05:
01 박유랑 Development of common data elements: the experience of and recommendations from the early detection research network       J.Club
11 홍승권 Privacy to the electronic medical record and telemedicine [ClinInfo] Seminar
19 윤혜성 Combining Distributed Data Mining and Semi-supervised Learning Using Social Network and Association Algorithm Technique  MAInfo
24 박유랑 Integration of MAGE-OM and CDA - 1 (modeling CDA template for clinical data in microarray) 　  BioEMR
31 김옥구 XML Schema design for CRF entry pages 　  BioEMR

2004-04:
14 박지연 Identifying Biological themes Within lists of genes  MAInfo
19 김옥구 Introduction of e-Clinical Trial System 　  BioEMR

2004-03:
13 박유랑 Ontology Versioning as an Element of an Ontology-Management Framework       J.Club
20 정희준 The PEPR GeneChip data warehouse, and implementation of a dynamic time series query tool (SGQT) with graphical interface       J.Club
23 unknown Estimating hidden structure in biochemical pathways through microarray data set [DataAnalysis] Seminar

2004-02:
02 박유랑 Implementation CDE(common data element) in TrialDB 　  BioEMR
14 박지연 A Mapping Schema and Interface for XML Stores       J.Club
17 unknown Implementation plan for TrialDB [ClinInfo] Seminar
23 팀원 Action Plan of CDMS Developemnt 　  BioEMR

2004-01:
13 unknown GRIP Interface 구성과 Ensembl localize [Grip] Seminar

2003-12:
09 unknown Xperanto Progress on December [Xperanto] Seminar
13 박찬희 Development of Human Protein Reference Database as an Initial Platform for Approaching Systems Biology in Humans       J.Club
20 박지연 A New Inlining Algorithm for Mapping XML DTDs to Relational Schemas       J.Club
23 unknown Web-based Clinical Data Management System --- Mapping Free Text into UMLS Concepts - Progress [ClinInfo] Seminar

2003-11:
10 박유랑 Clinical Trial Registry Systems 　  BioEMR
24 박유랑 Clinical Trial Registry Systems (review of TrialDB) 　  BioEMR
25 unknown Designing of Web-based Clinical Data Management System [ClinInfo] Seminar
27 김지훈(H) The Neuronal Differentiation in Mouse Embroynic Stemcell  MAInfo
27 김지훈(H) DataSharing Whole Day Meeting: stemcell  MAInfo

2003-10:
02 김지훈 Gemone-wide analysis relatiing expression level with protein subcelluler localization  MAInfo
04 정희준 Pathways database system: an integrated system for biological pathways       J.Club
13 박유랑 About NCI CDE(Common Data Element) 　  BioEMR
21 unknown SwissProt/TrEMBL in GRIP [Grip] Seminar
25 박찬희 Personalized and Automated dbSNP Surveillance System       J.Club
30 윤혜성 Problems connected with heterogeneous data type analysis  MAInfo

2003-09:
22 서화정 Design of CDA-based CDMS schema - Clinical Information Table 　  BioEMR

2003-08:
09 정태수 Subnetwork hierarchies of biochemical pathways       J.Club
11 박유랑 역학 DB(CancerDB) schema 분석  BioEMR
11 서화정 Stanford Univ.- TrailDB database schema 분석  BioEMR
18 이정애 Coding system의 활용 예 　  BioEMR
21 윤혜성 Multiclassifier Systems - Combining Classifiers  MAInfo
25 서화정 Design of CDA-based CDMS schema - Patient Data Table 　  BioEMR

2003-07:
01 서화정 Designing of Web-based Clinical Data Management System
-Modeling of Data Structure for Structured Clinical Document Sharing- 		 Seminar

2003-06:
03 김지훈 The consistency related problems to handle microarray data  Seminar
12 이권무 Systems Biology - Overview  Seminar
24 박지연 Object-oriented Analysis of Xperanto System  Seminar

2003-05:
13 이정애 Unified Medical Language System (UMLS)  Seminar
20 박지연 Database Design and Implementation of MGED Standards  Seminar
26 박지연 The application of the unified modeling language in object-oriented analysis of healthcare information systems       J.Club

2003-04:
03 윤혜성 Gene Functional classification by Semi-supervised Learning from Heterogeneous Data       J.Club
14 서화정 Designing and implementing special-purpose databases: lessons from the pharmacogenetic network       J.Club
22 박지연 Implementing MAGE-OM in ontology and relational schema  Seminar

2003-03:
18 윤혜성 An Overview of Data Models for the Analysis of Biochemical Pathways  Seminar

2003-02:
18 김지훈 Genome browser implementation  Seminar

2003-01:
21 서화정 CDA Implementation : How to create clinical document  Seminar

2002-11:
12 김지훈 "Genome annotation framework [pdf]"  Seminar

2002-10:
01 박지연 Microarray Database Implementation: an approach using Relational and Ontological models  Seminar
08 윤혜성 Semisupervised Learning for Semistructured Biodata Analysis  Seminar

2002-09:
03 온정헌 "Revealing modular organization in the yeast transcriptiona  Seminar
16 김지훈 Identification of regulatory elements using a feature selection method       J.Club
17 김지훈 Identification of regulatory elements  Seminar
26 박지연 The Binding Database: data management and interface design       J.Club

2002-07:
11 윤혜성 Active + Semi-Supervised Learning = Robust Multi-View Learning       J.Club

2002-06:
04 윤혜성 Semi-supervised learning  Seminar

2002-05:
02 박지연 Argus--a new database system for Web-based analysis of multiple microarray data sets       J.Club
14 박찬희 Introduction to Parallel Computing, Parallel implementation for clustering DNA chip data  Seminar
16 서화정 Standard method for describing an electronic patient record template: application of XML to share domain knowledge       J.Club
23 온정헌 Systematic determination of genetic network architecture       J.Club

2002-04:
11 서화정 Medical Vocabulary and Classification Systems  Seminar

-:
임재현 current statistics for transcriptome reference : ensembl  SysBiol
임재현 current statistics for transcriptome reference : ensembl  SysBiol
Computing tumor trees from single cells : SCITE, OncoNEM  MAInfo
Computing tumor trees from single cells-oncoNEM  MAInfo
한봄 Leukemia WXS data QC and annotation progress  BioEMR
PRISMA: guidlines for systematic reviews  MAInfo
WXS for leukemia busulfan-VOD  xMutant
Leukemia WXS Conversion  MAInfo
bioEMR 개선안  BioEMR
최선 bioEMR 개선안  BioEMR
최선 bioEMR 개선안  BioEMR
최선 bioEMR 개선안  BioEMR
최선 bioEMR 개선안  BioEMR
최선 bioEMR 개선안  BioEMR
Association of CRIM1 variant and 6-mercaptopurine-induced adverse effects in childhood acute lymphoblastic leukemia  SysBiol
Whole-genome sequencing of rare disease patients in a national healthcare system - Genomics England 100,000 genomes project  SysBiol
[Review] Implementing Genomic Clinical Decision Support for Drug-Based Precision Medicine  BioEMR
[Review] Implementation and obstacles of pharmacogenetics in clinical practice: An international survey  BioEMR
Query design for EMR study  BioEMR
Comparing polygenic risk scores between male and female depressive patients  SysBiol
Code system review in UKBB:Read Codes and CTV3  BioEMR
Handling temporality of clinical events with application to Adverse Drug Event detection in Electronic Health Records: A scoping review  xMutant
PhaCT: a novel approach for preemptive PGx testing and medication therapy optimization  BioEMR
Predicting Infections Using Computational Intelligence_A Systematic Review  BioEMR
조동영 The International Statistical Classification of Diseases and Related Health Problems (ICD)  SysBiol
GO sementic similarity  SysBiol
ASPIRE: Chemotherapy response prediction  SysBiol

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