SNUBI Research ::   (182 talks satisfying Presenter = 임영균)
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2020-01:
04 임영균   J.Club

2019-12:
09 임영균   TopicSem

2019-11:
04 임영균 tacrolimus sensitivity analysis with clinical variables  TopicSem
09 임영균 Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype     J.Club

2019-10:
21 임영균 Identification of genomic markers affecting sentivity of tacrolimus  Seminar

2019-09:
05 임영균 Networks of Cancer Gene 6.0  MAInfo
26 임영균 Tacrolimus high peaks variant analysis  TopicSem

2019-08:
03 임영균 RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues     J.Club
12 임영균 FNA 3번째 실험 분석  TopicSem

2019-07:
04 임영균 National Omics Data Encyclopedia (NODE) review   MAInfo
08 임영균 Tacrolimus sample sequencing summary  TopicSem

2019-05:
09 임영균 Cancer Dependency Map  MAInfo
25 임영균 Prioritization of cancer therapeutic targets using CRISPR-Cas9 screens     J.Club
30 임영균 SCS in public cellline data   TopicSem

2019-04:
25 임영균 somatic mutation filtering in tumor-only sequencing data  TopicSem

2019-03:
18 임영균 Pancreatic cancer FNA 2번째 sample 분석  TopicSem
21 임영균 Installation and Run of Neopepsee   MAInfo
23 임영균 Widespread Selection for Oncogenic Mutant Allele Imbalance in Cancer     J.Club

2019-01:
03 임영균 HCMDB data curation  MAInfo
19 임영균 A map of constrained coding regions in the human genome     J.Club
31 임영균 Distribution of population frequency and SIFT/Gene Score in in SCS genes  TopicSem

2018-12:
24 임영균 Relation between SCS and metastasis  TopicSem
26 임영균 Identification of Synthetic Cancer Survival and Synthetic Cancer Survival Burden in Lung Adenocarcinoma  Seminar

2018-11:
03 임영균 Network Propagation Predicts Drug Synergy in Cancers     J.Club
22 임영균 Identification of Synthetic Cancer Survival and Synthetic Cancer Survival Burden in Lung Adenocarcinoma  TopicSem

2018-10:
11 임영균 Variants calling workflow with GATK4   MAInfo
25 임영균 Identification of SCS pairs in public pancreatic cancer data  TopicSem

2018-09:
08 임영균 Tumor Mutational Burden and Efficacy of Nivolumab Monotherapy and in Combination with Ipilimumab in Small-Cell Lung Cancer     J.Club
13 임영균 Features associated immune checkpoint inhibitor  TopicSem

2018-08:
06 임영균 SCS analysis in Pancreatic cancer  TopicSem

2018-07:
05 임영균 Characteristics of germline SCS pair   TopicSem
07 임영균 Systematic analysis of complex genetic interactions     J.Club

2018-06:
07 임영균 TMB and Tumor immune in SCS  TopicSem
18 임영균 pVACseq:A cancer immunotherapy pipeline for identifying and prioritizing neoantigens from a list of tumor mutations  MAInfo

2018-04:
05 임영균 GDM analytics  TopicSem
21 임영균 Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics      J.Club
22 임영균 Moonlight: a tool for biological interpretation and driver genes discovery  MAInfo
30 임영균 GDM Analytics Annotation DB  TopicSem

2018-02:
05 임영균 Drug sensitivity and SCS   TopicSem
08 임영균 팀OT & CTRP(Cancer Therapeutics Response Portal) review  MAInfo

2018-01:
08 임영균 SCS analysis in MSI colon cancer  TopicSem
25 임영균 The most studies genes of all time and of any time  xMutant
27 임영균 Combination Cancer Therapy Can Confer Benefit via Patient-to-Patient Variability without Drug Additivity or Synergy     J.Club

2017-12:
06 임영균 Re-analysis of SCS in colon cancer  TopicSem
14 임영균 Project DRIVE: deep RNAi interrogation of viability effects in cancer  xMutant
27 임영균 Network of Cancer genes 5.0   MAInfo

2017-11:
02 임영균 Graphtyper: enables population-scale genotyping using pangenome graphs  xMutant
08 임영균 SCS analysis in TCGA coad and cell lines data  TopicSem
08 임영균 tcga followup clinical data   MAInfo
25 임영균 Comprehensive Analysis of Hypermutation in Human Cancer     J.Club

2017-09:
05 임영균 The Mutational Spectrum of MSI Events and MMR Genes in previous studies  xMutant
09 임영균 Integrative clinical genomics of metastatic cancer     J.Club
13 임영균 Public Cell lines databases  MAInfo
25 임영균 Drug sensitivity in SCS genes  TopicSem

2017-08:
16 임영균 SCS analysis in Colon cancer cell lines   TopicSem

2017-07:
08 임영균 A global genetic interaction network maps a wiring diagram of cellular function     J.Club
12 임영균 SAFE: Spatial Analysis of Functional Enrichment  xMutant
17 임영균 Aggregate DNAmethylation to gene scale  TopicSem
19 임영균 methHC: A database of DNA Methylation and gene expression in Human Cancer  MAInfo

2017-06:
12 임영균 Synthetic Cancer Survival relationship between DNA methylation and mutation  TopicSem

2017-05:
10 임영균 PARP inhibitors: Synthetic lethality in the clinic  xMutant
15 임영균 Never-smoker LUAD analysis  TopicSem
31 임영균 somatic mutation aggregation workflow used to generate both the public and protected MAFs in the GDC DNA-Seq pipelines.   MAInfo

2017-04:
29 임영균 Reassessment of Genomic Sequence Variation to Harmonize Interpretation for Personalized Medicine     J.Club

2017-03:
27 임영균 TCGA never smoker LUAD mutation profile  TopicSem

2017-02:
08 임영균 SMC lung cancer data analysis result  TopicSem
18 임영균 Somatic Mutation Patterns in Hemizygous Genomic Regions Unveil Purifying Selection during Tumor Evolution     J.Club

2017-01:
02 임영균 Analysis plan of SMC lung cancer data.  TopicSem
25 임영균 Influence of Co-occurring Mutations on Clinical Outcomes in leukemia  MAInfo
25 임영균 SMC lung cancer data 분석경과  xMutant

2016-11:
21 임영균 Identification of Synthetic Cancer Survival and Synthetic Cancer Survival Burden   TopicSem
26 임영균 Exploring genetic suppression interactions on a global scale     J.Club
30 임영균 overview of gain of function studies  MAInfo
30 임영균 Loss-of-function genetic tools for animal models: cross-species and cross-platform differences  xMutant

2016-10:
05 임영균 Pembrolizumab MSKCC data analysis  MAInfo
05 임영균 LUAD acs-mutation/expression analysis  xMutant
19 임영균 Differential characteristics among SCS burden groups   TopicSem

2016-09:
03 임영균 A Network of Conserved Synthetic Lethal Interactions for Exploration of Precision Cancer Therapy     J.Club

2016-08:
01 임영균 Analysis colon cancer in ICGC data  xMutant
03 임영균 Types of measures of prognosis  MAInfo
19 임영균 Identification of combinatory mutational effect between genes for patient survival in colon cancer     Seminar
29 임영균 Identification of SCS and SCS burden in multiple cancer  TopicSem

2016-07:
18 임영균 Identification SCS in COAD  TopicSem

2016-06:
08 임영균 Identification of co-methylation patterns in COAD   TopicSem
13 임영균 Simple example for using Mutect2  xMutant
17 임영균 The summary of TARGET project and NCI Genomc Data Commons (GDC)  MAInfo
25 임영균 Characterizing genomic alterations in cancer by complementary functional associations     J.Club

2016-05:
09 임영균 Identification of Synthetic Cancer Survival and Synthetic Cancer Survival Burden   TopicSem

2016-04:
09 임영균 Identification of neutral tumor evolution across cancer types     J.Club
18 임영균 Lung cancer cell line data processing  xMutant
29 임영균 Pharmacogenomic agreement between two cancer cell line data sets  MAInfo

2016-03:
11 임영균 Microsatellite instability in colorectal cancer—the stable evidence  MAInfo
23 임영균 Identification prognosis of patients with MSI in COAD  TopicSem

2016-02:
23 임영균 Patterns and functional implications of rare gremlin variants across 12 cancer types  xMutant
29 임영균 Identification of Synthetic Cancer Survival and Synthetic Cancer Survival Burden in Multiple Cancer  TopicSem

2016-01:
09 임영균 A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing     J.Club
18 임영균 팀운영방향 및 개인 연구주제 토론  MAInfo
20 임영균 SCS paper modified Figures and Table.  TopicSem
25 임영균 APBC 2016 review  Seminar
28 임영균 TCGA data status summary (renewal)  MAInfo

2015-12:
14 임영균 Identification of Synthetic Cancer Survival and Synthetic Cancer Survival Burden in Multiple Cancer  TopicSem

2015-11:
02 임영균 Identification of Synthetic Cancer Survival and Synthetic Cancer Survival burden in multiple Cancer    TopicSem
14 임영균 An Evolutionary Approach for Identifying Driver Mutations in Colorectal Cancer     J.Club

2015-09:
30 임영균 Lung cancer cell line sequence analysis  TopicSem

2015-08:
12 임영균 Figures & Tables for SS study  TopicSem
15 임영균 The Human Phenotype Ontology (HPO)   xMutant
29 임영균 Co-occurring Genomic Alterations Define Major Subsets of KRAS-Mutant Lung Adenocarcinoma with Distinct Biology, Immune Profiles, and Therapeutic Vulnerabilities     J.Club

2015-07:
06 임영균 Identification of Synthetic Survival and Synthetic Survival burden in multiple Cancer  TopicSem

2015-06:
03 임영균 Patient survival trends of synthetic survival burden   TopicSem

2015-05:
06 임영균 Identification of synthetic survival genes with survival analysis  TopicSem
16 임영균 Assessing the clinical utility of cancer genomic and proteomic data across tumor types     J.Club

2015-04:
04 임영균 Cox regression with Penalized likelihood   xMutant

2015-03:
13 임영균 Predicting effects of indels  xMutant
28 임영균 A method for calculating probabilities of fitness consequences for point mutations across the human genome     J.Club
30 임영균 Identification of potential synthetic lethal genes with survival analysis  TopicSem

2015-02:
16 임영균 Identification of potential synthetic lethal gene pairs.   TopicSem

2015-01:
12 임영균 Identification of potential synthetic lethal gene pairs.  TopicSem
24 임영균 Pan-cancer network analysis identifies combinations of rare somatic mutations across pathways and protein complex      J.Club
26 임영균 sg13  Seminar

2014-12:
17 임영균 Identificiation of potential synthetic lethal genes with survival analysis   TopicSem
19 임영균 SKCM analysis result  xMutant

2014-11:
05 임영균 SG13 exome interpretation  Seminar
08 임영균 Defining the disease liability of variants in the cystic fibrosis transmembrane conductance regulator gene     J.Club
21 임영균 Variant scores(SIFT, Polphen2..) in CFTR2 database variants  xMutant

2014-10:
06 임영균 Identifying potential synthetic lethal genes   TopicSem
10 임영균 ICGC LUSC Data analysis  xMutant
27 임영균 Identificiation of potential synthetic lethal genes with survival analysis  TopicSem

2014-09:
06 임영균 Predicting Cancer-Specific Vulnerability via Data-Driven Detection of Synthetic Lethality     J.Club
19 임영균 Syn-lethality: An Integrative Knowledge Base of Synthetic Lethality   xMutant
29 임영균 Identification of potential synthetic lethal genes   TopicSem

2014-08:
04 임영균 Identification of potential synthetic lethals gene using mutation and clinical data in TCGA   TopicSem
14 임영균 Overview of Gene Ontology and its application  xMutant

2014-07:
16 임영균 Identification of potential synthetic lethals gene using mutation and clinical data in TCGA   TopicSem
16 임영균 Condition and application of cox proportional hazard model  xMutant
26 임영균 ISMB review: Dissecting cancer heterogeneity with a probabilistic genotype-phenotype model     J.Club

2014-06:
11 임영균 Identification of potential synthetic lethals gene using mutation and clinical data in TCGA   TopicSem
28 임영균 A general framework for estimating the relative pathogenicity of human genetic variants.     J.Club

2014-05:
08 임영균 Permutation test to compare survival curves and result  xMutant
19 임영균 Survival analysis with cox proportional hazard model and permutation  TopicSem
29 임영균 Identification of potential synthetic lethals gene using mutation and clinical data   xMutant
30 임영균 Identification of potential synthetic lethals gene using mutation and clinical data  Seminar

2014-04:
14 임영균 Identification of potential synthetic lethal genes in 12 tumor types  TopicSem
26 임영균 Identification of synthetic lethal pairs in biological systems through network information centrality     J.Club

2014-03:
06 임영균 Identification of synthetic lethal genes in 12 major cancer types   xMutant
19 임영균 Identification potential synthetic lethal genes in cancer / CADD review  TopicSem

2014-02:
11 임영균 Identification of synthetic lethal genes in 12 major cancer types   xMutant
15 임영균 Discovery and saturation analysis of cancer genes across 21 tumour types     J.Club
17 임영균 Identification of synthetic lethal genes in 12 major cancer types   TopicSem

2014-01:
22 임영균 Synthetic Lethality Analysis in TCGA BRCA somatic mutation data   TopicSem

2013-12:
03 임영균 Workflow and result of survival analysis in TCGA, BRCA.  xMutant
04 임영균 Synthetic Lethality Analysis of BRCA   TopicSem
07 임영균 Integrative annotation of variants from 1092 humans: application to cancer genomics.     J.Club
23 임영균 Synthetic Lethality Analysis of BRCA   TopicSem
31 임영균 mutation analysis of TCGA LUSC data  xMutant

2013-11:
26 임영균 Synthetic Lethality Analysis of BRCA  xMutant

2013-10:
16 임영균 SNPChase: correcting errors from diverse literatures and SNV databases   TopicSem
19 임영균 Discovery Analysis of TCGA Data Reveals Association between Germline Genotype and Survival in Ovarian Cancer Patients  J.Club
30 임영균 TCGA germline mutation data : summary  TopicSem

2013-09:
03 임영균 Available public genomes for preprocessing: SIFT/PP2 Score  xMutant
04 임영균 SNPChase: correcting errors from diverse literatures and SNV databases  TopicSem
17 임영균 TCGA germline data labeling  xMutant

2013-08:
22 임영균 DNMT3A in OMIM  MAInfo
31 임영균   J.Club

2013-07:
04 임영균 Characteristics of DNA methylation depending on cancer types  MAInfo
06 임영균 CpG island shore methylation regulates caveolin-1 expression in breast cancer       J.Club
10 임영균 SNPChase: correcting errors from diverse literatures and SNV databases  TopicSem
12 임영균 SNPChase: correcting errors from diverse SNV databases for SNVs  Seminar
23 임영균 Characteristics of DNA methylation depending on cancer type(TCGA data)  xMutant
31 임영균 SNPChase: correcting errors from diverse literatures and SNV databases  TopicSem

2013-06:
10 임영균 SNPChase: correcting errors from diverse SNV databases for SNVs   TopicSem

2013-05:
11 임영균 DNA co-methylation analysis suggests novel functional associations between gene pairs in breast cancer samples     J.Club
14 임영균 Resources for Cancer Genome: COSMIC  xMutant
22 임영균 SNPChase: correcting errors from diverse SNV databases for SNVs  TopicSem
23 임영균 Genes regulating DNA methylation   MAInfo
30 임영균 Patterns of Methylation Status and Somatic mutations in Cancer Genome  xMutant

2013-04:
02 임영균 TCGA Data Primer: Barcode and Patient ID  xMutant
08 임영균 Plan for analyzing methylation & expression data in TCGA  TopicSem
23 임영균 Review previous studies for methylation-expression relationship   xMutant
24 임영균 Review previous studies for methylation-expression relationship  TopicSem

2013-03:
20 임영균 Analyzing DNA methylation regulation in cancers  TopicSem
26 임영균 DNA Methylation in TCGA Data and its Structure.  xMutant
30 임영균 Identification of markers associated with global changes in DNA methylation regulation in cancers       J.Club

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