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    2024-03:
    06 권호식 SNU OA Ұ 
    1 최선 UKB processing 

    2024-02:
    07 차재현 analyzing TCGA variants 
    28 유준기 CoxPH model for cross-sectional genomic data 

    2024-01:
    17 배소정 Heritability Estimation Approaches Utilizing Genome-Wide Data 
    24 권호식 Example data and vignette in R package 
    31 최선 multiplex network    

    2023-12:
    06 차재현 Review: Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition 
    06 차재현 TCGA_study 
    27 유준기 External DBs for filtering Synthetic Rescue Pairs 

    2023-11:
    08 유준기 Idea for identifying synthetic rescue pair  
    15 배소정 Post-GWAS analysis 
    22 권호식 R packages to develop R package 

    2023-10:
    04 차재현 Simons Foundation and SFARI 
    18 윤미선 Nine-gene pharmacogenomics profile service 
    18 윤미선 Nine-gene pharmacogenomics profile service 
    25 최선 Trajectory analyses in insurance medicine studies: Examples and key methodological aspects and pitfalls 

    2023-09:
    06 유준기 TCGA PanCanAtlas data 
    13 배소정 Phylogenetic analysis 
    20 권호식 (Review) Tutorial: guidelines for annotating single-cell transcriptomic maps using automated and manual methods 

    2023-08:
    02 배소정 One-stage object detectors 
    02 배소정 One-stage object detectors 
    16 권호식 AnnotSV: Annotation of Human Structural Variations 
    23 차재현 genomic studies of ASD 
    30 윤미선 Visualizing genomic information across chromosomes with PhenoGram 

    2023-07:
    05 차재현 Network characteristics and clustering 
    12 윤미선 EPO resistance index design & Mixed Effects Model 
    26 유준기 Positive selection scoring method 

    2023-06:
    07 유준기 Computational genomic approaches to interpret non-coding disease risk variants 
    14 최선 R packages for ML 
    21 배소정 Heterogeneous response to Glucocorticoids in breast cancer cells 
    28 권호식 Performance of CNV callers for WES data 

    2023-05:
    03 배소정 Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies 
    10 권호식 Busulfan and Adverse Drug Events 
    24 차재현 GWA Studies with UKBB data 

    2023-04:
    05 최선 GWAS 
    26 유준기 Single-cell whole genome sequencing (scWGS) in degenrative diseases 

    2023-03:
    02 최선 RD1 
    09 윤미선 Diffusion model 
    09 윤미선 Diffusion model 
    15 유준기 LRT-q: Rare variant association test for gene expression in multiple tissues 
    29 권호식 Cell types and Functions 

    2023-02:
    09 권호식 Cell markers and Stem cells 

    2023-01:
    19 유준기 Histological category of cancer and classification of Cancer predisposition genes 

    2022-12:
    08 배소정 Rare-Variant Association Analysis: Study Designs and Statistical Tests 
    22 최선 Time series in healthcare_1 

    2022-11:
    03 최선 Data valuation 
    10 윤미선 A gene set-integrated approach for predicting disease-associated genes 
    17 유준기 Disease-gene Database: DisGeNET 

    2022-10:
    27 권호식 NGS-based HLA genotyping tools 

    2022-09:
    08 윤미선 CLIP for Medical Image 
    08 윤미선 CLIP for Medical Image 
    15 유준기 Review of recurrent event models 
    22 배소정 MIMIC-IV database 

    2022-08:
    03 최선  
    04 ̿ Data of Signatures of copy number alterations from TCGA 
    11 권호식 Mutect2(Mitochondria mode) 
    16 최선 RNA seq research 
    25 최선 RNA seq research 

    2022-07:
    07 윤미선 Identifying interactions in omics data for clinical biomarker discovery using symbolic regression 
    07 윤미선 Star allele calling in CYP2D6 
    07 윤미선 Star allele calling in CYP2D6 
    14 유준기 CIBERSORTx: Determining cell type abundance and expression from bulk RNA-seq data 
    21 배소정 Bioinformatics in vaccine design and virus detection 
    28 ӿ Immune checkpoint inhibitor therapy response data  

    2022-06:
    16 최선 Reinforcement learning 
    23 ̿ Standard Preprocessing and Analysis of Single Cell Gene Expression Data 
    30 권호식 Association test for variants on X chromosome 

    2022-05:
    12 최선 shap value 
    26 유준기 Neutropenia criteria in Infliximab-treated IBD patients 

    2022-04:
    07 유준기 All of Us: Genomic data browser 
    14 ӿ MSK-MET, a cohort of over 25,000 patients with metastasis across 50 cancer types.  
    21 ̿ Curated variation benchmarks for challenging medically relevant autosomal genes 
    28 권호식 Mitochondrial DNA variants in gnomAD Browser 

    2022-03:
    03 ӿ Project Score / Opentargets review and data curation  
    10 ̿ Comparison of LOH Variant Calling Algorithms 
    10 ̿ Comparison of LOH Variant Calling Algorithms 
    10 ̿ Comparison of LOH Variant Calling Algorithms 
    17 권호식 [Review] Repeated Measures Designs and Analysis of Longitudinal Data 
    24 최선 SAS_statistic 
    31 윤미선 Issues in Identification of pharmacogenetic variants from WGS in Health Showcase 

    2022-02:
    10 최선 SAS command for HIRA data analysis 
    24 유준기 Study design - Infliximab response in IBD patients 

    2022-01:
    06 유준기 Accessing JGA (Japanese Genotype-Phenotype Archive) data 
    20 ̿ Mutational analysis of triple-negative breast cancer using targeted kinome sequencing 
    27 권호식 Human CNV and complex genetic disease 

    2021-12:
    09 ̿ Comparison of CNV Detection tool Performance between Large and Small panel 
    16 권호식 Useful functions for preprocessing clinical data in R 
    23 최선 Plan for HIRA big data analysis 
    30 윤미선 Anomaly Detection for Medical Images Using Self-Supervised and Translation-Consistent Features 

    2021-11:
    25 유준기 Variant calling from transcriptome data  

    2021-10:
    07 ӿ Cancer register in UKB 
    14 ̿ Aggregate Trend of LOH by eQTL method 
    21 권호식 Sequencing and Imputation 
    28 최선 Morphological Filtering & segmentation metrics 

    2021-09:
    09 최선 Research idea challenge using cancer big data 
    15 최선 Public Cancer Bigdata 
    24 최선 Cancer idea challenge_0924 
    30 유준기 Comparing Rare Variant Association Tests 

    2021-08:
    02 ӿ Molecular Features for subgrouping cancer patients  
    09 ̿ AlphaFold : Highly Accurate Protein Structure Prediction 
    30 권호식 Genebass 

    2021-07:
    05 최선 Review: Multi-omics approaches to disease    
    12 윤미선 A Nextflow Genome-Wide Association Study Pipeline 
    12 윤미선 A Nextflow Genome-Wide Association Study Pipeline 
    19 최선 Traces_Python library for unevenly-spaced time series analysis 
    26 유준기 Combining UKB dataset with eQTL data 

    2021-06:
    21 ̿ GTEX eQTL data  
    28 권호식 Filtering out false positive variants 

    2021-05:
    03 최선 cancer subtype classification and modeling by pathway attention and propagation 
    10 윤미선 Generative Adversarial Nets and its Application in Biomedical Informatics 
    12 ӿ Association IRF2BP1 gene and Pancreatitis 

    2021-04:
    01 ̿ LOH of Korean TNBC 
    08 권호식 review : Contrast media 
    15 ӿ MSI analysis in Cancer.  
    22 ̿ Review of Prognosis Potential Loss of Heterozygosity in TNBC 
    29 권호식 Adverse Effects of Contrast Media 

    2021-03:
    04 ̿ OncoKB Annotator 
    11 권호식 Charlson comorbidity index 

    2021-02:
    25 ӿ metmap 

    2021-01:
    28 ̿ TNBC Survival Analysis  

    2020-12:
    03 ̿ Korean Uveal Melanoma Exome Analysis Figure 
    17 최선 Training Keras Models Using the Genetic Algorithm with PyGAD 
    24 ӿ Comparison deleteriousness between germline and somatic variants in cancer  

    2020-11:
    05 ̿ Recent LOH algorithm review 
    26 ӿ pancreatic cancer WES analysis 

    2020-10:
    22 최선 Pytorch tutorial 
    29 ӿ Summary of Pancreatic cancer data analysis  

    2020-09:
    10 최선 propensity score matching 
    17 ӿ Identifying genetic variant associated FOLFIRINOX regimen 
    24 ̿ BLAST Result of UVM for Sanger Validation 

    2020-08:
    06 권호식 Sex chromosomes and genetic association studies  
    13 ӿ Affecting FOLFIRINOX sensitivity(CAP grade) variants 
    27 ̿ CNV Validation Candidate Selection 

    2020-07:
    04 최선 Sklearn.preprocessing package for preprocessing data  
    09 ӿ CAP grade analysis 
    15 ̿ UVM Copy Number Analysis  

    2020-06:
    04 ̿ Uveal Melanoma Analysis: Somatic Mutation  
    11 ӿ Variant Analysis with Pancreatic cancer FNA sample 
    18 권호식 Variants related to MTX efficacy or toxicity reported in PharmGKB and Clinical significance in ClinVar  
    25 ӿ Drug response & Prognosis measurement in Cancer Research  

    2020-05:
    07 권호식 HD-MTX : BUN & Candidates from Fold-Cr 
    14 ӿ Progression of tacrolimus study 
    21 Retrieval of AAP patients with acute pancreatitis caused by drugs in UK Biobank data 
    29 최선 Research design for TEA 

    2020-04:
    02 최선 Rethinking drug design in the artificial intelligence era 
    09 ӿ Comparison variants between TSVC and GATK pipeline 
    23 ̿ TNBC survival analysis 

    2020-03:
    05 ӿ Pan-Cancer Analysis of Whole Genomes (PCAWG) project.  
    12 ̿ Access and Download the EGA European Genome-Phenome Archive 
    19 Figures and tables of WES analysis of AAP in Korean pediatric patients  
    26 권호식 TM7SF3 variant in UKB 

    2020-02:
    06 유승원 mercaptopurine study - discussion issues 
    20 권호식 BiobankRead 
    27 최선 Advanced SQL query using sub query, CTE 

    2020-01:
    02 최선 ϰ ׾ġĢ 
    09 ӿ Genetic polymorphism influences the pharmacokinetics of tacrolimus 
    16 WES Analysis to search the risk factor of anthracycline-induced prolonged neutropenia 
    23 A brief history of human disease genetics 

    2019-12:
    05 Identifying genes related to age of onset in Major Depressive Disorder (MDD) patients 
    12 ̿ Packaging Novel Gene-Wide Copy Number Variation Detection Algorithm 
    19 유승원 Gene ontology м : FunSet(an open-source software and web server for performing and displaying Gene Ontology enrichment analysis) 
    26 권호식 The genome Aggregation Database 

    2019-11:
    07 권호식 Analysis of HD-MTX induced renal toxicity In Pediatric Patients with ALL  
    15 최선 ׾ġĢ 
    28 Genomic analysis of L-asparaginase-induced pancreatitis in 25 Korean pediatric ALL patients. 

    2019-10:
    10 Analysis of OPLL 
    10 WES analysis of AML samples according to neutropenia duration  
    17 ̿ Performance Comparison of Ampicon Based Sequencing Conpy Number Detection Tools 
    31 유승원 Introduction : GO-CAM(Gene Ontology Causal Activity Modeling) 

    2019-09:
    05 ӿ Networks of Cancer Gene 6.0 
    19 최선 google cloud platform 
    26 Characteristics of candidate genes that cause side effects of L-asparaginase 

    2019-08:
    01 권호식 Rare-Variant Association 
    08 유승원 Whole Exome Sequencing : germline variant caller comparison 

    2019-07:
    04 ӿ National Omics Data Encyclopedia (NODE) review  
    11 MetaDome: Pathogenicity analysis of genetic variants through aggregation of homologous human protein domains 
    18 Workflow and Kaplan-Meier estimation for MDD  
    25 ̿ Funcotator : FUNCtional annOTATOR 

    2019-06:
    13 유승원 discussion : application of drug score, pathway score to 6MP analysis 
    20 권호식 List of public primary datasets and discussion 
    27 최선 Consideraton for development of rehabilitation-CDM 
    27 최선 Consideraton for development of rehabilitation-CDM 

    2019-05:
    02 최선 Dimension calculation in CNN 
    09 ӿ Cancer Dependency Map 
    16 Case-control analysis identifies shared properties of rare germline variation in cancer predisposing genes  
    23 Parallel processing in R  
    30 ̿ Optimization Filtering for Detecting Putative Tumor Mutations with Know Cancer Mutations 

    2019-04:
    04 GS-DBA: Gene Set Deleterious Burden Analysis 
    11 ̿ The Progsotic Potential of Loss of Heterozygosity  
    18 유승원 Intersect and combine approach for alginers,variant callers - based on NA12878 gold standard WES data 
    25 권호식 Considerations in Assigning Star Alleles to 1KGP 

    2019-03:
    14 국수경 Advantages and disadvantages of the Foundation-Medicine cancer panel in head and neck adenocarcinoma 
    21 ӿ Installation and Run of Neopepsee  
    28 Settling the score 

    2019-02:
    07 권호식 star allele assignment and annotation 
    14 김재환 Development of knowledge base (RarePedia) and software platform (VAAT & PMAT) for NGS study result based genetic counseling 
    28 채정환 WES seq analysis 

    2019-01:
    03 ӿ HCMDB data curation 
    10 Analysis of candidate variants in patients with side effects of L-asparaginase 
    17 Analysis of age at onset in depression 
    25 ̿ Comparison of Inhouse CNV Algorithms and Ioncopy with Microarray CNV Data 
    31 유승원 Homopolymer error types from Ion Proton sequencer 

    2018-12:
    06 채정환 practice:understanding of TCGA data compared with taxol seq-data 
    06 채정환 practice:understanding of TCGA data compared with taxol seq-data 
    13 최선 Comorbidity adjustment in clinical data 
    13 최선 Comorbidity adjustment in clinical data 

    2018-11:
    15 유승원 discussions : rare variant tests(burden test) 
    22 권호식 Variants related with MTX-induced renal toxicity or HDMTX from research papers 
    29 김재환 Rarepedia & Genetic variant annotation assistant tool (VAAT) at Laboratory Medicine Annual Meeting 2018 

    2018-10:
    04 최선 Introduction to clinicaltrials.gov DB 
    11 ӿ Variants calling workflow with GATK4  
    18 Analysis of onset age in depression 
    25 ̿ TNBC Analysis of LOH Affecting Cancer Survival 

    2018-09:
    13 유승원 study : exploration of non-linear method(Random Forest) for 6MP dose prediction( 
    20 권호식 Study : Leukemia and Anticancer drugs 
    27 채정환 Myocardial infarction based study 

    2018-08:
    06 김재환 ü ǷḦ 帧 Ʈ  
    20 [Review]Variant caller 

    2018-07:
    02 유승원 circRNA : potential therapeutic target 
    09 ̿ Copy Number Alteration Visualization 
    16 권호식 Mutational Signatures of COSMIC 
    23 채정환 breast cancer patient RNA-seq data analysis 

    2018-06:
    04 권호식 Leukemia WXS Conversion 
    11 채정환 Tumor microenvironment 
    18 ӿ pVACseq:A cancer immunotherapy pipeline for identifying and prioritizing neoantigens from a list of tumor mutations 
    25 UCSC Xena:Analysis tools for cancer  

    2018-05:
    07 WES analysis of AML samples according to prolonged neutropenia duration 
    16 EN-RNvs.EY-RYanalysis in depression 
    16 ENvs.EYanalysis in depression 
    16 summary 
    21 ̿ Clinical Feature Selection for Cox Proportional-Hazards Mode in SNUH TNBC Analysis 
    28 유승원 introduction : A pathway-centric approach to rare variant association analysis 

    2018-04:
    02 정문경 PRISMA: guidlines for systematic reviews 
    02 권호식 Leukemia QC and Annotation 
    09 정문경 Research Interest & Exploring TCGA data 
    16 채정환 coding and non-coding gene variants associated with gene expression and outcome in breast cancer subtypes 
    22 ӿ Moonlight: a tool for biological interpretation and driver genes discovery 
    30 Bioinformatic tools for transcript quantification and alternative splicing 

    2018-03:
    05 ̿ oncopy: a novel method for calling copy number alterations in amplicon sequencing data including significance assessment 
    12 유승원 Computing tumor trees from single cells-oncoNEM 
    28 iCAGES:integrated Cancer GEnome Score for comprehensively prioritizing driver genes in personal cancer genomes 

    2018-02:
    01 Prediction model of treatment response in depression  
    08 ӿ OT & CTRP(Cancer Therapeutics Response Portal) review 
    14 Similarity of alternative polyadenylation in thyroid with kidney and liver cancers 
    28 Modified workflow and statistical methods for AAP analysis 

    2018-01:
    04 ... Data integration patient clinical information with medication history 
    11 Problems with allele matcher switching from VCF to GVCF 
    18 Alternative splicing in thyroid cancer 
    25 ̿ Analysis of Tumor Mutational Burden (TMB) Workflow 

    2017-12:
    06 ȣ CPTAC and TCGA Breast Cancer samples, data 
    13 ̿ TNBC and Non-TNBC Kinome NGS data 
    20 Analysis of depression with cut-off in age of onset  
    27 ӿ Network of Cancer genes 5.0  

    2017-11:
    01 Ependymal tumor analysis 
    08 ӿ tcga followup clinical data  
    15 Preprocessing results of 26 AML exome sequencing 
    22 Significantly regulated multi-isoform genes 
    29 Comparison of DaPars and RUD method in alternative polyadenylation study 

    2017-10:
    11 Research plan for follicular thyroid neoplasm 
    18 ȣ Depression phenotype and gwas studys 
    25 ̿ Somatic Mutation Analysis with WGS of Small Round Cell Tumor in Brain 

    2017-09:
    06 Analysis of microarray using the GEO data  
    13 ӿ Public Cell lines databases 
    19 Visualization web application for interaction  
    27 Significantly regulated multi-isoform genes 

    2017-08:
    09 The effect of BRAF and RAS mRNA expression on posttranscriptional regulation 
    16 ȣ 1000 Depression data and non-baseline clinical variants 
    30 ̿ Package of Cancer Panel for Pathology Department 

    2017-07:
    05 GENIE : Basic characteristics of clinical and genomic data across the various cancer type 
    12 Introduction to ANNOVAR Update 
    19 ӿ methHC: A database of DNA Methylation and gene expression in Human Cancer 
    26 Survival analysis of pancreatitis patients using clinical information  

    2017-06:
    07 Asparaginase-associated Pancreatitis in pediatric ALL patients 
    14 Calculating ERK score of THCA samples 
    21 ȣ Genome Analysis Toolkit 4 (GATK4) alpha review 
    28 ̿ OncoKB: A Precision Oncology Knowledge Base 

    2017-05:
    24 Analysis of posttranscriptional regulation using public data in thyroid cancer 
    31 ӿ somatic mutation aggregation workflow used to generate both the public and protected MAFs in the GDC DNA-Seq pipelines.  

    2017-04:
    05 Isoform fraction analysis methodology 
    12 Further AS and APA analysis in TCGA THCA data 
    19 ȣ NCBI EST ABCB1 information summary 
    26 ̿ How to get controlled access data from ICGC data portal. 

    2017-03:
    02 ̿ COSMIC v80 Update : Introduction of COSMIC-3D 
    08 MEREDITH:Clustering and Visualization tools for TCGA PAN-CANCER with multiplatform genomic data 
    15 RarePedia protocol Ȳ 
    29 WXS to detect genes causing AAP in 13 SNUH patients 

    2017-02:
    01 Clinical information of pancreatitis patients 
    08 Converting GDC UUID to TCGA barcode 
    15 The effect of BRAF and RAS mRNA expression on alternative polyadenylation in TCGA SKCM and PTC 
    22 ȣ Workflow of Single-Cell DNA Sequencing and case example 

    2017-01:
    04 ̿ Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown. 
    11 [Review]Pathway based gene signature predicting clinical outcome in cancer 
    11 [Review]Pathway based gene signature predicting clinical outcome in cancer 
    18 Association between ApoE genotype and AD 
    25 ӿ Influence of Co-occurring Mutations on Clinical Outcomes in leukemia 

    2016-12:
    07 Patient Information on L-asparaginase associated Pancreatitis 
    14 Comparing SURVIV results with results from paper 
    21 Experimental validation of alternative splicing and polyadenylation in mouse model for Csnk2b deletion  
    28 ȣ SNP and gene name search 

    2016-11:
    02 ȣ single-cell RNA-seq data analysis workflow 
    09 ̿ Genotype-Tissue Expression(GTEx) Portal 
    16 [Review] Filtering variant and Direction of effect in SKAT-O test 
    30 ӿ overview of gain of function studies 

    2016-10:
    05 ӿ Pembrolizumab MSKCC data analysis 
    12 Localization of TCGA clinical data from GDC Data Portal 
    19 Taking rMATS output files and plotting aligned exon read densities using Sashimi plot 
    26 Updated splicing analysis of papillary thyroid cancer 

    2016-09:
    07 ȣ SEVEN BRIDGES - The Biomedical Data Analysis Platform 
    14 ̿ Review_ Epigenome-wide Association Studies and the Interpretation of Disease -Omics 
    21 [Review]Towards precision medicine  
    28 Download TCGA clinical data from GDC data portal  

    2016-08:
    03 ӿ Types of measures of prognosis 
    10 [review]Personalized pathway enrichment map  
    17 The summary of TCGA clinical data 
    24 Manually calculating pentamer motif enrichment in RAS-mutated samples 
    31 Updated results of skin cutaneous melanoma data  

    2016-07:
    06 Analysis of splicing and polyadenylation in mouse model with Csnk2b deletion  
    13 ȣ multivariate regression model to panel data 
    20 ̿ Review and Practice of HISAT 2 pipeline  
    27 Descriptive statistics of Alzheimer 

    2016-06:
    03 ̿ Brief statistics of Cancer Panel data of HY samples 
    10 Analysis of WXS data in COPD patients 
    17 ӿ The summary of TARGET project and NCI Genomc Data Commons (GDC) 
    24 The implications of the biological network for human health 
    24 The implications of the biological network for human health 
    30 Manually calculating PSI values using junction quantification data 

    2016-05:
    06 The summary of TCGA clinical data  
    13 [Review] Identification of highly recurrent aberrant alternative splicing events in HCC through integrative RNAseq analysis 
    20 Plan of alternative splicing and polyadenylation analysis in TCGA melanoma data  
    27 ȣ TCGA and genotype MLR analysis 

    2016-04:
    01 [REVIEW] Intron retention and Disease  
    08 ȣ genotype and perturbation analysis progression 
    15 ̿ TCGA multicenter calling problem and Validation DP filter 
    22 Review of cancer subtypes with molecular characters (LGG,KIRC,LAML) 
    29 ӿ Pharmacogenomic agreement between two cancer cell line data sets 

    2016-03:
    03 ̿ Brief statistics and Process of evaluation Cancer panel ability 
    11 ӿ Microsatellite instability in colorectal cancer—the stable evidence 
    18 Exome-sequence analysis of COAD in TCGA 
    18 molecular clinico feature  
    25 MISO pilot results 

    2016-02:
    04 Cancer genome database: COSMIC 
    11 MISO review 
    18 Alternative polyadenylation by mutation type of papillary thyroid cancer  
    25 ȣ TCGA data and perturbation sensitivity 

    2016-01:
    02 ̰ȭ AF comparison with BRONJ and 1KP  
    08 ̰ȭ Review: Quantifying the Slightly Deleterious Mutation Model of Molecular Evolution 
    14 ̰ȭ Review:Needles in stacks of needles: finding disease-causal variants in a wealth of genomic data 
    18 ӿ  
    28 ӿ TCGA data status summary (renewal) 

    2015-12:
    18 ̰ȭ List of Drugs for Pharmsafe Report  
    25 ̰ȭ BRONJ variants analysis 

    2015-11:
    13 ̰ȭ Statistical analysis of variants in COPD target sequencing study.  

    2015-10:
    02 Significant alternative splicing events in papillary thyroid cancer 
    09 ̿ Review Journal: ClinLabGeneticist 
    16 Manipulating gene sets for drug score calculation 
    30 ̰ȭ Using SRA toolkit for downloading the exome seq data of 16 BRONJ samples 

    2015-09:
    04 Cornell RNA-seq data analysis report  
    12 Review of Optimal Unified Approach for Rare Variant Association Test(SKAT-O) 
    18 ̿ Review ClinSeK: a targeted variant characterization framework for clinical sequencing 
    25 ̰ȭ Statistical analysis of variants in COPD target sequencing study. 

    2015-08:
    07 ̿ Refractory Acute Leukemia(RAL) data analysis result 
    15 ̰ȭ COPD targeted sequencing data: variants analysis  
    21 ̰ȭ Risk prediction of SNUBI Genome using GWAS catalog 

    2015-07:
    11 ̰ȭ 2015 ACMG guideline review 
    17 Alternative Polyadenylation in heart development and disease 
    24 ̿ Kataegis and Rainfall plot 
    24 ̿ Kataegis and Rainfall plot 
    30 ̰ȭ COPD data analysis results 

    2015-06:
    05 Targeted sequencing data analysis of 6-mercaptopurine related neutropenia cases from ALL 
    12 ̰ȭ Review: Personalized Pharmacogenomics: Predicting Efficacy and Adverse Drug Reactions 
    18 ̰ȭ 2015 Health Innovator 
    18 ̰ȭ Health Innovator 2015-2 
    26 Candidate gene summary of 6-mercaptopurine related neutropenia cases from ALL 
    26 Candidate gene summary of 6-mercaptopurine related neutropenia cases from ALL 

    2015-05:
    01 ̰ȭ Cancer genomics review 
    15 ̰ȭ Review of method: Burden test 
    15 ̰ȭ Review of the method :burden test 
    22 Review: splicing analysis of cancer data 
    29 ̿ Reversal Loss of Heterozygosity 

    2015-04:
    03 Summary of erroneous patterns in busulfan case 
    10 ̿ Review of public genome data: TCGA Lv2 VCF data & 1000Genome phase3 
    17 ̰ȭ Review of cancer genomics: Colon cancer 
    24 ̰ȭ Review: Genomics of cardiovascular disease 

    2015-03:
    20 ̰ȭ Review: A comprehensive laboratory-based program for classification of variants of uncertain significance in hereditary cancer genes. 

    2015-02:
    06 HHA data analysis : protein domain annotation results 
    13 ̰ȭ Review of public genome data: 1KP and HapMap project 

    2015-01:
    02 Summary of Hereditary Hemolytic Anemia Targeted Sequencing data analysis 
    09 Thyroid cancer data analysis 
    16 ̿ Review of MutSig 
    23 VATtools setup 
    23 VATtools setup 
    30 ̰ȭ The importance of phase information for human genomics 

    2014-12:
    05 ȼ Review of cancer microbiome: viral induced cancer  
    12 Replication of PS study 
    19 ̿ Analysis of Noncoding regulatory mutations: Regional recurrence analysis 
    26 ̰ȭ Mutation in TSGs and chemotherapy response 

    2014-11:
    07 Thyroid cancer: ROS related gene analysis result 
    13 ̰ȭ TCGA tumor suppressor genes 
    14 ̰ȭ LOH of tumor suppressor genes and chemotherapy response using TCGA data 
    14 ̰ȭ LOH of tumor suppressor genes and chemotherapy response using TCGA data 
    14 ̰ȭ LOH of tumor suppressor genes and chemotherapy response using TCGA data 
    14 ̰ȭ TCGA data status summary (renewal) 
    21 ̿ Process of non-coding region analysis 
    28 Analysis of HHA data : Variant calling result and sequence level SIFT annotation 

    2014-10:
    10 SG02 Genome Interpretation processing 
    17 ̿ Comprehensive analysis of DNA data 
    31 Sequenza 
    31 Sequenza  
    31 Sequenza  
    31 Sequenza  
    31 ̰ȭ Unmatched results of genome annotation by multiple tools 

    2014-09:
    12 ̰ȭ Genomic data privacy and security 
    12 ̰ȭ Genomic data privacy and security 
    26 Phenotype-Genotype correlations 
    26 phenotype 
    26 Phenotype-Genotype correlations 
    30 edgeR review  

    2014-08:
    01 ȼ Review of Statistical Methods: KS test (I) 
    14 ̰ȭ cBioPortal review 
    22 ̿ Analysis result of thyroid cancer with thyroiditis  
    29 ̰ȭ TCGA-Assembler: open-source software for retrieving and processing TCGA data 

    2014-07:
    03 Exome Sequencing pipeline and analysis results 
    11 ̿ G.S.E.A for data analysis 
    18 LOH of tumor suppressor genes and chemotherapy response using TCGA data 

    2014-06:
    12 ̰ȭ Exome sequencing annotation pipeline 
    19 ̰ȭ News 
    26 ȼ Experimental Design & Statistical Issues in RNA-seq 

    2014-05:
    01 ȼ Thyroid cancer RNA-seq analysis 
    01 ̰ȭ News about Genomics    
    08 ̰ȭ Exome-Sequencing annotation strategy 
    22 Variant Annotation Tool(VAT) Review 
    29 ̿ TCGA ovarian cancer patient data analysis 
    29 ̿ TCGA ovarian cancer patient data analysis 

    2014-04:
    03 Variant calling pipeline for P0 genome 
    03 ̰ȭ Genomic news 
    10 ̰ȭ Genome News 
    10 ȼ RNA-seq pipeline review 
    24 ̰ȭ Genome news 
    24 ̿ Network based survival    

    2014-03:
    05 ̿ TCGA data preview 
    05 ̰ȭ TCGAomics 3-4 ǥ 
    13 The 1000 Genomes pilot projects 
    20 ̿ NEJM_2009_Molecular origins of cancer :DNA Damage, Aging and cancer 
    27 SIFT : predicting amino acid changes that affect protein function 
    27 ̿ nature_Comprehensive molecular portraits of human breast tumour 

    2013-08:
    16 Prediction algorithms used in SIFT  
    22 ӿ DNMT3A in OMIM 

    2013-07:
    04 ӿ Characteristics of DNA methylation depending on cancer types 
    11 ̿ Algorithms for finding mutated driver pathways  
    18 GWAS of cancer  

    2013-06:
    20 Identify high coverage and mutual exclusive mutations 
    27 RNA isoforms of cancer genes 

    2013-05:
    02 Odds ratios of disase variants with gene-gene and/or gene-environmental interactions 
    09 Summary of pseudogene expressions  
    16 Data processing for clustering analyses of gene expression in tumors  
    23 ӿ Genes regulating DNA methylation  
    30 ̿ Strategy for integrating omics data to interpret cancer genome 

    2013-04:
    04 Summary of comprehensive analyses by TCGA Research Network 
    11 Review for Hereditary cancer - oncogene 
    25 ̿ Identifying disease polymorphisms in case-control data 
    25 ̿ Identifying disease polymorphisms in case-control data 

    2013-03:
    22 ̿ Summary of GICD Team 
    22 ̿ Summary of GICD Team 
    28 Current Trends in Proteomics 
    28 Current Trends in Proteomics 
    28 Current Trends in Proteomics 

    2013-01:
    15 network based pathway analysis for COPD data 
    15 network based pathway analysis for COPD data 

    2012-12:
    11 Network analysis for ChIPseq data 
    20 Summary of MedCassandra 

    2012-11:
    27 Comparison of transcriptome via Drosophilia RNA-seq data 

    2012-10:
    09 Encode(3) : Architecture of Human regulation network  
    11 process of drug & ADR ranking calculation 
    25 Drug database integration for cancer drug research 
    26 A genome-wide genetic interactions map for breast cancer survival 

    2012-09:
    13 Drug integration for drug repositioning using ADR 

    2012-08:
    14 Bipartite Network Analysis for TCGA Kidney clear cell carcinoma dataset 

    2012-06:
    19 Breast cancer transcriptome analysis using weighted PPI Network 
    28 data extraction for construction of ADR-drug-target relationship 

    2012-05:
    01 Breast cancer transcriptome analysis using weighted PPI Network 
    03 ȿ Consensus clustering of GBM data from TCGA 
    29 Building And Visualizing Breast Cancer Co-expression Network 

    2012-04:
    03 Comparison of 198 Gene Expression Network Topology 
    10 Rocky microRNA-Drug relationship using NCI cancer cell lines panel 
    12 Drug repositioning based on adverse drug reaction 
    12 screen for cooperatively working gene pair in breast cancer 
    13 Drug repositioning based on adverse drug reaction () 
    13 ȿ Replication for analysis lung adenocarcinoma data from TCGA 
    26 using adverse drug reaction data - SIDER 

    2012-03:
    15 Summary on TCGA data 
    28 ȭ Core pathways in ovarian carcinomas driven by somatic mutations    

    2012-02:
    07 Predicting the disease potential of personal genome based on disease hierarchy 

    2012-01:
    03 ̼ Exome and transcriptome sequencing data analysis 
    10 ̼S CREE a Tool for Comparison and Retrieving of RNA-editing Sites from Next Generation Sequencing Data 
    17 Rocky Classification of renal cell carcinoma subtypes based on gene expression data and mapping genomic variation to NGS data 
    31  

    2011-12:
    08 ̼S Finding RNA editing sites and genome region annotation  
    13 Rocky Mapping of genomic variation in miRNA and its binding sites using whole genome sequencing data 
    20 Disease scoring system based on sequencing data 
    27 The structure of quad-partite graph by gene, disease, environment and DNA methylation  

    2011-11:
    01 Rocky Global mapping of genomic variations on microRNAs, target genes, TFBS, RNA binding proteins with variant knowledgebase 
    08 The structure of disease-etiology database on the epigenomic layer 
    15 Knowledge-based synergistic variant detection from NGS data 
    22 ̼ Genomic similarity in population 
    29 ̼S Finding RNA editing sites and genome region annotation  

    2011-10:
    04 Rocky Detection of genomic variations for microRNA and its target sites 
    11 The network of disease-association with etiological factors on the epigenomic layer. 
    18 Considering goal and method 
    25 ̼S Comparison of RNA-editing sites from RNA-seq samples 

    2011-09:
    06 Epigenetics: A molecular link between environmental factors and disease 
    15 Knowledge-based predicting functions of variants and identifying combinatorial rare variants 
    20 ̼S Finding RNA-editing site tool  
    27 Rocky Analysis of genomic variation in miRNA and its binding sites using whole genome sequencing data 

    2011-08:
    02 Rocky Database schema for miRNA variant annotation 
    13 ̼S Finding RNA-editing site 

    2011-07:
    05 Integration of functional effect of sequence variations on models of pathways 
    14 Disease associated-methylation annotator using NGS 
    19 Predicting Phenotypic Severity of Uncertain Gene Variants 
    26 Rocky Analysis of genomic variation in miRNA and its binding sites using whole genome sequencing data 

    2011-06:
    01 Discovery of individually combinatorial rare variants in genes related to diseases 
    07 ̼ Sequence comparison in population 
    14 ̼S Comparison of RNA editing sites from multiple NGS data 
    21 Rocky Framework for genomic variation discovery in miRNA and its binding sites from NGS data 
    28 From SNPs to pathway 
    28 Sequence Informatics  

    2011-05:
    03 introduction of metagenomics 
    17 Introduction of Epigenetics - DNA methylation and analysis tool 
    24 Sequence Informatics  

    2011-04:
    05 Identification of novel transcripts using RNA-seq data 
    12 Discussion on team project of SIGE team 
    19 ̼S RNA-seq data processing and analysis 
    19 PoPoolation A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals    
    26 Rocky microRNA variants detection from RNA transcriptomic deep sequencing data 

    2011-03:
    11 Problems in manipulating large scale NGS data  
    15 ۿ Targeted next-generation sequencing detects point mutations, insertions, deletions and balanced chromosomal rearrangements as well as identifies novel leukemia-specific fusion genes in a single proced 
    22 GAMES identifies and annotates mutations in next-generation sequencing projects 
    29 ̼ Differential expression analysis for sequence count data    

    2011-02:
    08 Identifying cancer driver genes in tumor genome sequencing studies 
    15 ̼ Gene ontology analysis for RNA-seq accounting for selection bias    

    2010-12:
    07 MagicViewer: integrated solution for next-generation sequencing data visualization and genetic variation detection and annotation    
    14 Problems in manipulating large scale NGS data 

    2010-11:
    02 Novel multi-nucleotide polymorphisms in the human genome characterized by whole genome and exome sequencing 
    09 DEGseq 
    16 ̼ Mapping and quantifying mammalian transcriptomes 
    23 Targeted capture and massively parallel sequencing of 12 human exomes    
    30 Rocky A practical, bioinformatic workflow system for large data sets generated by next-generation sequencing    
    30 ̼ Read Count Normalization 

    2010-10:
    05 Rocky Computational classification of microRNAs in next-generation sequencing data sequencing data    
    12 Next-generation DNA sequencing    
    19 Generations of sequencing technologies    
    19 ̼ converting NGS data into tag count 
    26 ۿ NGS and histopathology 

    2010-09:
    07 ۿ Representation of Short Read Sequencing Data as a Vector 
    07 Targeted capture and massively parallel sequencing of 12 human exomes 
    14 RNA-Seq : A revolutionary tool for transcriptomics 
    14 ̼ Tag from RefSeq 
    28 Rocky Detecting single nucleotide variants from next generation sequencing data 
    28 ̼ 3 tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer 

    2010-08:
    31 Brief description of team 
    31 ̼ converting RNA-seq into tagCount compare with traditional extracting expression profile 

    2010-07:
    06 ̼ Convert NGS reads into tags to store, map and analysis & 
    06 Annotation System of structural variation for Next Generation Sequencing data 
    06 Rocky Detecting single nucleotide variants from next generation sequencing data 
    20 ̼ Convert NGS reads into tags to store, map and analysis - workflow 
    20 Rocky SNVMix: predicting single nucleotide variants from next-generation sequencing of tumors 

    2010-06:
    01 ̼ miRNA and mRNA expression profiling from Deep sequencing data 
    01 AnsNGS - Annotation System of structural variation for Next Generation Sequencing data 
    01 Rocky Work Progress 
    08 Personal Sequence Omnibus 
    08 ̼ Progress align read seqs in GSE10782 
    08 Rocky MicroRNA Discovery and Profiling in Human Embryonic Stem Cells by Deep Sequencing of Small RNA Libraries 
    08 ̼S maq error 
    08 1000 genome 
    15 genome-wide representation of all DNA variants 
    22 ̼ RNA-seq data convert into tag count 
    22 Rocky Gene expression profiling by massively parallel sequencing 
    22 rQuant.web: a tool for RNA-Seq-based transcript quantitation    
    22 ̼S MAQ error 

    2010-05:
    04 ̼S Plan of Develop tool for Predictive personalized 
    04 ̼ NGS vs. microarray 
    04 Recommendations for the description of DNA changes 
    04 ۿ Sequence Ontology 
    12 ̼S Plan of Develop tool for Predictive personalized disease using miRNA in personal NGS DATA 
    12 ̼ To get mRNA and miRNA profiles from RNA-Seq data 
    19 ̼ Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing tech. for measuring differential microRNA expression    
    19 ۿ Lethal combinations of SNPs 
    19 Rocky Deep sequencing reveals differential expression of microRNAs in favorable versus unfavorable neuroblastoma    
    25 Biocandy Milestone 
    25 Plan for NGS team project 
    25 ̼ To get Co-transcriptomics data from NGS data, and then analysis 
    25 Rocky Deep sequencing reveals differential expression of microRNAs in favorable versus unfavorable neuroblastoma 
    26 ̼S Source data down load 

    2010-04:
    02 Structural variation databases 
    02 ̼S Copy number variation databases and SNP DATABASE LIST 
    06 ̼ Apollo: a sequence annotation editor    
    06 ̼ DDBJ Read Archive and DDBJ Read Annotation Pipeline : an archive database and an analytical tool for next-generation sequence data    
    07 ̼S miRNA database using NGS data 
    07 Annotation for Short Read 
    12 ̼ MAQ  
    14 ̼S miRNA database using NGS data-2 
    14 ̼ add personal data 
    14 Design and implementation of a generalized sequence data model - motivation 
    14 Annotation System for Next Generation Sequencing data 
    14 Rocky De Novo Genome Assembly using Paired-End Short Reads 
    16 ̼ maq result using human Refseq data download 
    20 Sequence Annotation - current research 
    20 ̼ NGS and co-transcriptomics 
    21 ̼S miRNA database using NGS DATA 
    27 ̼ A highly annotated whole-genome sequence of a Korean Indivisual    
    27 Next generation sequencing Technology 
    27 Genetics of neurodegenerative diseases: insights from high-throughput resequencing 
    27 Rocky Sequence assembly using paired-end short tags  
    28 ۿ Whole genome sequencing for Korean individual 

    2006-07:
    07 Specific dose responsiveness in B10 to ionizing radiation 
    14 ¼ On parkinson-mouse data [parkinson]

    2006-06:
    02 Data Analysis of Methotrexate in Rheumatoid Arthritis    
    09 ¼ Discovering differential co-expression patterns between normal and tumor samples [DiffCoexpression]
    16 Interpretation of Mantel test 
    23 ѹ̷ Meta analysis of AB chip & cDNA chip 
    30 Gene Set Association Test (for GAW15 data) 

    2006-05:
    12 Mantel test with pathway gene set II 
    19 Finding gene modulator with latent variable model 
    26 ѹ̷ MCF-7 cell line data analysis    

    2006-04:
    07 ѹ̷ cDNA microarray 
    14 Analysis plan for "Genetic Analysis Workshop" data. [genetical genomics]
    28 ¼ Differential co-expression patterns between normal and tumor samples [DiffCoexpression]

    2006-03:
    10 Chicken PGC data analysis 
    17 Meta Analysis of Microarray 
    24 ¼ Prediction of microbial infection [Myco]
    31 Selection of gene subset with MDR algorithm in Mantel test 

    2006-02:
    01 Analysis of Human Cancer Microarray Data with Clinical Information; application of Mantel statistics with combination of clinical variables 
    01 ѹ̷ Cancer Stem Cells 
    08 CCD data primary analysis 
    08 ¼ Order-preserving patterns in normal and tumor samples [DiffCoexpression]
    22 Mantel test with gene set 

    2006-01:
    04 ѹ̷ Breast AB chip analysis 
    04 BMT Data Analysis Strategy 
    11 Microarray data analysis of human cancers with clinical information; application of Mantel statistics 
    11 ¼ Order-preserving patterns in normal and tumor samples [DiffCoexpression]
    18 CCD Data Analysis 
    18 RA/OA data analysis 
    25 ¼ Order-preserving patterns in normal and tumor samples [DiffCoexpression]
    25 RA/OA data analysis (part 2) 

    2005-12:
    07 Evaluation of matrix factorization methods for the analysis of DNA microarray gene expression data 
    07 Comparison between Affy and ABI chip 
    14 From signatures to models 
    14 ѹ̷ Autism aCGH data analysis using CGH-Explorer 
    21 Microarray data analysis of human cancers with clinical stage information 
    21 ¼ Gene set having different sequence patterns [DiffCoexpression]
    28 -supplementary site  
    28 mesenchymal stem cell м Ȳ 

    2005-11:
    02 Genetical Genomics 
    02 ¼ Detection of microbial infection in cultured cells on the basis of mollecular profiling of host responses 
    09 Problem solving in GIST data 
    09 Pathway-based microarray analysis; results with different data sets 
    16 ѹ̷ Autism aCGH data analysis using Biocandi 
    23 Combining microarray and genetic analysis 
    23 matrix factorizaiton method validation  
    30 Comparison of gene expression profiling between different clinical stages 

    2005-10:
    05 NMF with sparseness constraints 
    05 GIST data analysis 
    12 ¼ Detection of infection in Cultured Cells 
    19 Microarray analysis with multple pathways 
    19 Progress of GIST data analysis 
    26 Comparison of matrix factorization and clustering methods 
    26 ѹ̷ Autism arrayCGH data 

    2005-09:
    07 BioCANDI module -DEDS, ICA, PCA 
    07 ü BioCANDI progress 
    14 Codelink chip microarray analysis 
    14 ü BioCANDI progress 
    21 ¼ Required functions in Xperanto-BioCanDI 
    21 TBA 
    28 Tumor microarray classification using clinical information 
    28 ѹ̷ ArrayCyGHt:a web application for analysis and visualization of array-CGH data 

    2005-08:
    03 Plan for knowledge based microarray analysis 
    03 ¼ Progress in BioCANDI 
    10 Radiation Data Analysis - Time dependent 
    10 ¼ Required Analysis Modules in BioCANDI 
    17 Analysis plan of toxicant related data 
    17 Application of matrix factorization to microarray data analysis 
    24 ¼ Significant genes in GIST data 
    31 GSEA & Naive Bayes 
    31 ѹ̷ aCGH_GLAD for Biocandi 

    2005-07:
    06 ѹ̷ SKY/M-FISH and CGH Database 
    06 ¼ Significant genes in detecting mycoplasma infection of cell 
    13 Pathway based tumor classification 
    13 Review of matrix factorization (ISMB review) 
    20 Review of Matrix Factorization 
    20 Summary of Radiation Data Analysis 
    27 ѹ̷ aCGH analysis review 

    2005-06:
    01 ̼ 縯 ۸ м 
    08 Review of ICA for classification and its application 
    08 ̿ GIST( ) chip  
    15 ¼ Analysis of Mycopasma infection data 
    15 ѹ̷ Protein classification from protein-domain and gene-ontology annotation information using formal concept analysis 
    22 Understanding to the complicated biological responses to IR 
    22 Microarray Analysis using Prior Biologic Knowledge 
    29 ̿ Macrogen Oligo, ABI, Affymetrix chip  

    2005-05:
    04 The Detection of Outlier Cases with Deviation of Logistic Regression Analysis 
    04 ¼ MycoplasmaKFDA: ǥ ΰ ׽Ʈ 
    11 Outline of Radiation Data Report 
    18 ¼ BioCANDI2 in Xperanto 
    25 DEDS in xperanto Ȳ 
    25 Affymetrix Arrays: Diagnostic and Analysis Tools 

    2005-04:
    06 ¼ Mycoplasma data м 
    06 ѹ̷ Analysis of breast cancer arrayCGH data 
    13 Comparison of Statistical Methods in Replicated Microarray Profiles 
    13 Analysis of microarray data of lung and cervical cancer 
    20 ̼ ENU м 
    27 ѹ̷ Breast Cancer Array CGH analysis review 
    27 ETRI data м plan 
    27 ̿ ۸ ļ ABI chip  

    2005-03:
    02 ̿ CRF rat chip м 
    02 ̼ AB microarray м(2) 
    09 ѹ̷ Array CGH data analysis using CGH-Miner 
    09 Analysis of Lung cancer data using ICA 
    16 The Analysis of cervical cancer microarray data -II 
    16 ¼ Complete report templete for microarray data analysis 
    23 ̼ ABI chip м Ȳ (2-way ANOVA ̿ Gene Filtering۾) 
    23 Secondary Analysis of Radiation Data 
    30 Progress in lung cancer data analysis 
    30 ̿ CRF rat chip clustering м  

    2005-02:
    02 Analysis of Lung cancer data using ICA 
    02 ѹ̷ Breast cancer aCGH data & Normalization 
    16 Analysis of Cervix Cancer Microarray Data 
    16 ¼ Report form of Microarray data analysis 
    25 Analysis of B10 by Radiation Exposure 

    2005-01:
    05 ̼ Ontologizer Review 
    12 ѹ̷ Analysis of arrayCGH breast cancer data 
    12 Discover emerging patterns in multi-source data 
    19 ¼ Processes of Microarray data analysis 
    19 Progress in analysis of lung cancer data Using ICA 
    26 ̿ CRF rat chip м 
    26 ̼ AB microarray м 

    2004-12:
    01 [TMA] Relational database for tissue microarray 
    01 ѹ̷ Antidepressant cDNA mouse data м 
    08 ¼ [Myco] DNA Microarray ̿  
    08 [ICAformicroarray] Application of ICA 
    15 ѹ̷ Analysis of arrayCGH breast cancer data using GLAD 
    15 ̼ Normalization microarray м 
    22 ¼ [PathPlus-human] 
    22 Feature selection and Multiclass analysis 
    29 [ICAforMicroarray]ICA of lung cancer data 

    2004-11:
    03 ѹ̷ Molecular Profiling of Clinical Features in Breast Cancer Using Principal Component Analysis 
    03 An object model and database for tissue microarray 
    10 ̼ȣ Analysis using FDR 
    10 ¼ [DNA Microarray ̿ ?] м  
    17 ̼ Research plan 
    17 Application of ICA for microarray data analysis 
    24 Data analysis using Weka 
    24 ̿ Comparison of labeling methods for Microarray experiments 

    2004-10:
    06 ICA to analyze microarray data 
    06 ¼ Microarray expression data reflect the pathway knowledge 
    13 ̼ A genetic Approach for Gene Selection on Microarray Expression data 
    13 An object model for tissue microarray : comparison with DNA microarray 
    20 Linking and Combined Analysis Method based on Information Quantity of Multi-source Data 
    20 ̿ Micorarray Experiment 

    2004-09:
    01 Data Integration and Analysis Method based on Information Quantity of Multi-Source Data 
    01 ¼ [PathPlus] Performance index of prediction for pathway 
    15 ̼ȣ Microarray Informatics : START 
    22 ѹ̷ Survival analysis of Breast cancer 
    22 ̼ȣ Lung Cancer Analysis 

    2004-08:
    11 ѹ̷ PCA analysis of Breast cancer data 
    11 Multi-Source Data Integration and Analysis 
    18 PLS method in cancer data analysis 
    18 Methods in Lung Cancer Data Analysis 
    25 ̼ȣ Survival data analysis using microarray cancer data 
    25 PathPlus 

    2004-07:
    14 Data Analysis - Radiation Data 
    14 Bioconductor Basics 
    21 microarray data preprocessing 
    21 ¼ PathPlus 

    2004-06:
    09 ¼ Big Picture of PathPlus 
    09 DIB-C 
    16 ѹ̷ 27 ER(-) breast cancers with/without recurrence 
    16 How to add microarray data to PathPlus 
    23 Microarray image acquisition and analysis 
    23 Integration Rules Extraction Using Multi-source Data 
    30 Normalization for cDNA microarray data 
    30 Scanalyze & Data preprocessing 

    2004-05:
    12 ¼ Plan to extend human pathway 
    12 Micorarray result validation 
    19 Combining Distributed Data Mining and Semi-supervised Learning Using Social Network and Association Algorithm Technique 
    19 Difference-Based Clustering of Time Series Data 

    2004-04:
    07 ¼ PathPlus 
    14 Analysis of responsive genes after Low-Dose Ionizing Radiation Using Evolutionary Algorithm 
    14 Identifying Biological themes Within lists of genes 

    2004-03:
    10 ¼ Extraction and validation of pathway structure from Yeast genome society 
    10 (H) Analyzing the microarray experiment with the factorial design 
    17 Pathway Extension through genome society information 
    24 Analysis of Radiation data 
    24 Monitoring Low Radiation dose by Gene Expression Profiling 
    31 Ų ǥ(?йڻ ) 

    2004-02:
    12 Analysis of variance in thyroid microarray data 
    19 Simulation study to measure cyclicity in microarray expression profile 
    24 ¼ Monthly report 
    26 (H) ES Cell Differentiation 

    2004-01:
    27 Monthly report 
    29 Preprocessing cell-cycle microarray data using PERL 

    2003-12:
    04 What should I make bed? T.T 

    2003-11:
    06 Review of BRB ArrayTools 
    13 (H) Preparing DataSharing Whole Day Meeting 
    27 Microarray Data Analysis in Rat Thyroid 
    27 (H) The Neuronal Differentiation in Mouse Embroynic Stemcell 
    27 (H) DataSharing Whole Day Meeting: stemcell 
    27 ѹ̷ Stanford Breast Cancer Microarray Data 
    27 Data processing of Lung Cancer Data 
    27 ¼ Analysis of Gastric data 

    2003-10:
    02 Gemone-wide analysis relatiing expression level with protein subcelluler localization 
    02 Social Network Application 
    09 GRIP SNP data 
    09 Understanding Stanford Lung Cancer Dataset 
    16 ѹ̷ Molecular profiles of invasive mucinous and ductal carcinoma of the breast cancer 
    16 Expression profiles of non-small cell lung cancers on cDNA microarray : Identification of genes for prediction of lymph-node metastasis and sensitivity to anti-cancer drugs 
    30 Problems connected with heterogeneous data type analysis 
    30 Using gene effect to identify periodical genes 

    2003-09:
    04 (H) Introduction to Survival Analysis 
    04 Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses 
    25 ¼ Core group of gastric cancers 
    25 ѹ̷ Breast and Ovarian Cancer 

    2003-08:
    07 cDNA Microarray Analysis of Gene Expression in Pathologic Stage 1A Nonsmall Cell Lung Carcinomas 
    14 ѹ̷ Bio-Perl 
    21 Multiclassifier Systems - Combining Classifiers 
    28 Meta-analysis of microarray data in lung cancer 

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