SNUBI Research ::   (148 talks satisfying Presenter = 박찬희)
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2012-02:
07 박찬희 Cluster File System and adjusting variant calling filtering option  Seminar

2011-10:
13 박찬희 Rare variant analysis  Seminar

2011-09:
07 박찬희 NGS Analysis Pipeline using GATK NGS analysis on Amazon Cloud  Seminar

2011-08:
23 박찬희 SNP and Indel Identification Variant Analysis and Annotation     TopicSem
25 박찬희 GWAS tutorial  TopicSem

2010-12:
20 박찬희 Manuscript progress  TopicSem

2010-11:
06 박찬희 permGPU: Using graphics processing units in RNA microarray association studies     J.Club
10 박찬희 Select killer item on writing manuscript   TopicSem

2010-09:
15 박찬희 Strategy on adding gene-mesh relationship in GRIPdb     TopicSem
18 박찬희 A standard variation file format for human genome sequences     J.Club

2010-08:
05 박찬희 GeneXrefDB in the aspect of Link Mining  TopicSem

2010-07:
31 박찬희 Uniformly curated signaling pathways reveal tissue-specific cross-talks and support drug target discovery     J.Club

2010-06:
19 박찬희 Network-Based Elucidation of Human Disease Similarities Reveals Common Functional Modules Enriched for Pluripotent Drug Targets     J.Club
24 박찬희 The Notation for defining Ideal Gene Bi/Triple Set Object  Seminar

2010-05:
15 박찬희 Deciphering the splicing code     J.Club

2010-04:
03 박찬희 The gputools package enables GPU computing in R     J.Club

2010-02:
01 박찬희 How to use GEO data (2) ( classify normal and disease in sample description )  Seminar
27 박찬희 Multifactor Dimensionality Reduction for Graphics Processing Units Enables Genome-wide Testing of Epistasis in Sporadic ALS     J.Club

2010-01:
09 박찬희 Human gene expression sensitivity according to large scale meta-analysis     J.Club
11 박찬희 GRIPs role in Translational Bioinformatics  Seminar
18 박찬희 The statistical method to integrate miRNA-mRNA target relationship  Seminar
25 박찬희 How to use GEO data  Seminar

2009-12:
07 박찬희 Open GRIP Improvement  Seminar
12 박찬희 An integrative approach to reveal driver gene fusions from paired-end sequencing data in cancer     J.Club
21 박찬희 Path Based System  Seminar
28 박찬희 Path Based System  Seminar
30 박찬희 Finding gene symbol, cross-reference inconsistency from Gene Centric Databases  Seminar

2009-11:
16 박찬희 KPGRN Data Public Open  Seminar
21 박찬희 Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists     J.Club
30 박찬희 GRIP Vision Current and Challenge  Seminar

2009-10:
07 박찬희 [Paper Review]What is a gene, post-ENCODE? History and updated definition  Seminar
10 박찬희 The effects of probe binding affinity differences on gene expression measurements and how to deal with them     J.Club
28 박찬희 HIVE - data warehouse infrastructure built on top of Hadoop  Seminar

2009-09:
03 박찬희 Genomic coordinate overlapping similarity in mutually llinked set  Seminar
21 박찬희 Combining Gene Symbol and cross-references info. can increase the number of gene object triplet  Seminar

2009-08:
03 박찬희 GeneXrefDB  Seminar
21 박찬희 Is reciprocaly linked set is really same gene?  Seminar
29 박찬희 CRONOS: the cross-reference navigation server       J.Club

2009-07:
01 박찬희 Protein Comparative Sequence Analysis  BookReading
09 박찬희 Gene Symbol inconsistency when mutually linked set analysis  Seminar

2009-06:
04 박찬희 Summary [EntrezGene & UniGene] CC & SCC analysis  Seminar
22 박찬희 Can we call ‘is this a same gene?’ if entrez/unigene xref is mutually linked  Seminar
27 박찬희 UTGB Toolkit for Personalized Genome Browsers     J.Club

2009-05:
18 박찬희 Applying Spatial indexing on genomic coordinate data  Seminar
20 박찬희 Microarrays - Analysis of Signaling Pathways  BookReading
30 박찬희 Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues     J.Club

2009-04:
08 박찬희 In silico Gene Discovery  BookReading
11 박찬희 GraphWeb: mining heterogeneous biological networks for gene modules with functional significance     J.Club
13 박찬희 GRIP progress  Seminar
30 박찬희 Network & Sub-Network Structure between EntrezGene & UniGene based on its link property  Seminar

2009-03:
05 박찬희 Finding connected components between EntrezGene & UniGene  Seminar
24 박찬희 GRIP ( Genome Research Informatics Pipeline ) Integrating biological resources for genome research     TopicSem
26 박찬희 Hadoop - for distributed computing and data storage  Seminar

2008-11:
24 박찬희 GRIP ( Genome Research Information Pipeline )  Seminar

2008-07:
14 박찬희 GRIP(Genome Research Information Pipeline)  Seminar

2007-12:
28 박찬희 Integrative analysis in the study of cancer  Seminar

2007-06:
09 박찬희 BioGuideSRS: querying multiple sources with a user-centric perspective     J.Club
13 박찬희 Object Network Visualization using Cytoscape and eXpanda  Seminar
18 박찬희 Object Network Visualization  Seminar
29 박찬희 GRIP Advanced Search Page using prototype & scriptaculous-js (AJAX)  Seminar

2007-05:
07 박찬희 Adding new DB & Adding new DB  Seminar
18 박찬희   Seminar

2007-04:
06 박찬희 A tutorial on statistical methods for population association studies (1/2)  Seminar
14 박찬희 A tutorial on statistical methods for population association studies       J.Club

2007-03:
03 박찬희 High-Throughput Multi-dimensional Scaling (HiT-MDS) for cDNA-Array Expression Data       J.Club
21 박찬희 Fast GRIP  Seminar

2007-02:
02 박찬희 Toy Example for dealing Large matrix  Seminar
28 박찬희 GRIP 작업사항(사실상 완료)  Seminar

2007-01:
12 박찬희 50000 * 50000 memory allocation using global arrays  Seminar
20 박찬희 ChromoScan: a scan statistic application for identifying chromosomal regions in genomic studies [scan statistics, SNP]      J.Club
29 박찬희 약물유전체 실적 및 계획 [pharmGKB] Seminar

2006-12:
01 박찬희 Pairwise Linkage Disequilibrium Statistic from Affx 500K snp chip data [snp chip, 500k] Seminar
09 박찬희 SNiPer-HD: Improved Genotype Calling Accuracy by an Expectation-Maximization Algorithm for High-Density SNP Arrays       J.Club
22 박찬희 AffyMetrix 500k SNP Chip Genotyping & LD statistics 분석 예  Seminar

2006-11:
06 박찬희 SNP 분석방법 및 Databasing 방안 [SNP, 500k, SNP CHIP] Seminar
08 박찬희 Modified Cluster index approach for storing SNP Chip Data  Seminar

2006-10:
18 박찬희 GRIP Problem when auto-update  Seminar
28 박찬희 To permute or not permute [permutation]      J.Club

2006-07:
08 박찬희 A model diagram layout extension for SBML  J.Club

2006-06:
03 박찬희 Genome-wide analysis of mammalian promoter architecture and evolution  J.Club
15 박찬희 HDF 가 우리에게 유용한가?  SysBiol

2006-05:
22 박찬희 The whole new GRIP  Seminar
25 박찬희 약물유전체 DB 수정요구사항 정리  SysBiol

2006-04:
17 박찬희 new Grip  Seminar
22 박찬희 Different methods of calculating gene expression from short oligonucleotide array data will give different results       J.Club
27 박찬희 Depth-First Search 기반 Object Search & Drawing Object Network  SysBiol

2006-03:
09 박찬희 DB Update 및 Interface 현황  SysBiol

2006-02:
01 박찬희   Seminar
06 박찬희 newGRIP 현황 요약  Seminar

2005-10:
07 박찬희 약물유전체 DB 수정 사항  SysBiol
22 박찬희 Comparative analysis of algorithms for identifying amplifications and deletions in array CGH data       J.Club

2005-09:
12 박찬희 newGRIP - final  Seminar
16 박찬희 GRIP Pathway Mapping  SysBiol
27 박찬희 약물유전체 DB 수정 사항 정리  xMutant

2005-08:
27 박찬희 PhD: a web database application for phenotype data management       J.Club
30 박찬희 Sequence-Gene , Gene-Protein Category Association table 작성  xMutant

2005-07:
05 박찬희 Gene Identifier 를 부여 할 수 있는 idea  xMutant
09 박찬희 LitMiner and WikiGene: identifying problem-related key players of gene regulation using publication abstracts.       J.Club
26 박찬희   xMutant

2005-06:
17 박찬희 attributes of New GRIP  SysBiol

2005-05:
10 박찬희 Sequence Level & Gene Level 진행상황  xMutant
13 박찬희 Gene 레벨 & Gene Family 레벨 진행상황  SysBiol
21 박찬희 RNA expression microarrays (REMs), a high-throughput method to measure differences in gene expression in diverse biological samples       J.Club
30 박찬희 New GRIP Progress( from sequence to protein family ) [AppGen] Seminar
31 박찬희 New_GRIP :Prosite and Pfam  xMutant

2005-04:
02 박찬희 GECKO: a complete large-scale gene expression analysis platform       J.Club
08 박찬희 Current Localized Sequence object status  SysBiol

2005-03:
04 박찬희 Finding human SNPs miRNA genomic position related  xMutant
10 박찬희 GRIP Specs. (미정리..)  SysBiol
29 박찬희 GRIP Progress ( sequence )  xMutant

2005-01:
06 박찬희 MDS errors...  SysBiol
07 박찬희 BAC Clones resolved  xMutant
15 박찬희 Gene Ontology Multidimensional Scaling Mapping [SysBiol] Seminar
20 박찬희 GRIP object  SysBiol
28 박찬희 Web based ArrayCGH data analysis tool 구현(1/2)  xMutant

2004-12:
16 박찬희 GRIP Object 의 property 결정  SysBiol
24 박찬희 NA  xMutant

2004-11:
18 박찬희 GRIP Version 2 Intro
( GRIP Ver.2 의 modelling 과 open/closed integration issue 들에 대한 논의 ) 		 SysBiol
26 박찬희 약물유전체 genotype data 를 human whole genome 에 mapping 시켜 display 하기  xMutant
29 박찬희 GRIP Ver 2 Modelling  Seminar

2004-10:
14 박찬희 GEO에서 Platform Description header 와 Sample Description header의 분석  SysBiol
29 박찬희 KPRN data 입력 페이지  xMutant

2004-09:
24 박찬희 Beginning of AppGen  xMutant

2004-08:
31 박찬희 Can we exchange SOFT formatted GEO into MIAME ?  Seminar

2004-07:
10 박찬희 The aMAZE LightBench: a web interface to a relational database of cellular processes       J.Club
24 박찬희 The Genome Knowledgebase: A Resource for Biologists and Bioinformaticists       J.Club

2004-05:
15 박찬희 GoMiner: a resource for biological interpretation of genomic and proteomic data       J.Club

2004-04:
06 박찬희 Data Integrating Issue [Grip] Seminar

2004-03:
27 박찬희 Pharmacogenetics: potential for individualized drug therapy through genetics       J.Club

2004-02:
07 박찬희 Automatic extraction of mutations from Medline and cross-validation with OMIM       J.Club

2003-12:
13 박찬희 Development of Human Protein Reference Database as an Initial Platform for Approaching Systems Biology in Humans       J.Club

2003-10:
09 박찬희 GRIP에서의 SNP data  MAInfo
25 박찬희 Personalized and Automated dbSNP Surveillance System       J.Club

2003-07:
10 박찬희 Gene interaction in DNA microarray data is decomposed by information geometric measure       J.Club

2003-06:
10 박찬희 SNUBI server 시스템 변경 및 전체 GenBank 중 Human/Rat/Mouse 조사  Seminar

2003-04:
15 박찬희 Database Integration (Case 1 . LocusLink AND UniGene)  Seminar

2003-03:
27 박찬희 A database on alternative splice forms on the Integrated Genetic Map Service (IGMS)     J.Club

2003-02:
25 박찬희 Development of SNU-GRIP(Genome Research Informatics Potal)  Seminar

2003-01:
23 박찬희 SNPper: retrieval and analysis of human SNPs       J.Club

2002-11:
19 박찬희 MITree 알고리즘의 구현 (Part 1)  Seminar

2002-10:
10 박찬희 A bioinformatic strategy to rapidly characterize cDNA libraries       J.Club

2002-09:
24 박찬희 Summary my work & Biological database integration strategy  Seminar

2002-08:
27 박찬희 Current Research GRIP Project  Seminar

2002-07:
02 박찬희 Adaptive quality-based clustering of gene expression profile  Seminar

2002-06:
25 박찬희 A cluster validity framework for genome expression data       J.Club

2002-05:
14 박찬희 Introduction to Parallel Computing, Parallel implementation for clustering DNA chip data  Seminar

2002-04:
23 박찬희 Prediction of probable genes by Fourier analysis of genomic sequences       J.Club

2002-03:
28 박찬희 Identification of Genes in Human Genomic DNA  Seminar

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