SNUBI Research ::   (170 talks satisfying Presenter = 이수연)
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2012-02:
13 이수연 Prepare co-expression data using GEOquery package in R   TopicSem
18 이수연 Systematic detection of putative tumor suppressor genes through the combined use of exome and transcriptome sequencing     J.Club

2012-01:
03 이수연 Exome and transcriptome sequencing data analysis  MAInfo
04 이수연 miRNA-mRNA Pair-database : summarize by 4 categories  TopicSem
25 이수연 miRNA target prediction and functional annotation  Seminar

2011-12:
08 이수연 miRNA-mRNA pair database fill out statistics  TopicSem
31 이수연 SeqGene a comprehensive software solution for mining exome- and transcriptome- sequencing data     J.Club

2011-11:
22 이수연 Genomic similarity in population  MAInfo

2011-08:
23 이수연 RNA-seq Data Analysis     TopicSem

2011-07:
16 이수연 MU2A - reconciling the genome and transcriptome to determine the effects of base substitutions     J.Club

2011-06:
07 이수연 Sequence comparison in population  MAInfo
13 이수연 MicroRNA 기능 분석을 위한 miRNA-mRNA 쌍의 관계 속성 데이터베이스 및 분석방법론 개발  TopicSem
20 이수연 MicroRNA 기능 분석을 위한 microRNA-mRNA 쌍의 관계 속성 데이터베이스 및 분석방법론 개발  TopicSem

2011-05:
02 이수연 Construction of miRNA-mRNA pair database  TopicSem
21 이수연 miRGator v2.0 : an integrated system for functional investigation of microRNAs     J.Club
25 이수연 Construct miRNA-mRNA pair database - add co-expressed data set  TopicSem

2011-04:
06 이수연 miRNA-mRNA pair database design  TopicSem
09 이수연 Towards computational prediction of microRNA function and activity     J.Club

2011-03:
16 이수연 To analysis co-transcriptomics data using miRNA-mRNA pairing database  TopicSem
29 이수연 Differential expression analysis for sequence count data     MAInfo

2011-02:
15 이수연 Gene ontology analysis for RNA-seq accounting for selection bias     MAInfo
19 이수연 Using GOstats to test gene lists for GO term association     J.Club
21 이수연 Relationship btw co-transcriptomics data and target genes  TopicSem

2011-01:
05 이수연 Database of miRNA-mRNA pairs  TopicSem
26 이수연 miRNA-mRNA pairing relationship ? genomic locations and co-transcriptomics data set  TopicSem

2010-12:
06 이수연 Converting RNA-Seq data into tag count - read count normalization  Seminar
11 이수연 miRSel: Automated extraction of associations between microRNAs and genes from the biomedical literature     J.Club
15 이수연 Extract miRNA-mRNA pairs from gene2pubmed and compare with miRSel  TopicSem

2010-11:
16 이수연 Mapping and quantifying mammalian transcriptomes  MAInfo
30 이수연 Read Count Normalization  MAInfo

2010-10:
16 이수연 High-Throughput SuperSAGE for Digital Gene Expression Analysis of Multiple Samples Using Next Generation Sequencing     J.Club
19 이수연 converting NGS data into tag count  MAInfo
25 이수연 Converting NGS data into tag count - tag-to-gene identification  Seminar
27 이수연 Extract miRNA-mRNA target pairs from literatures and co-transcriptomics data  TopicSem

2010-09:
04 이수연 RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays     J.Club
08 이수연 Extract real miRNA targets from literatures  TopicSem
14 이수연 Tag from RefSeq  MAInfo
27 이수연 Translating RefSeq sequence and RNA-Seq reads into 17-mer tags  Seminar
28 이수연 3 tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer  MAInfo

2010-08:
09 이수연 Purpose of Convert NGS reads into tags  Seminar
31 이수연 converting RNA-seq into tagCount compare with traditional extracting expression profile  MAInfo

2010-07:
06 이수연 Convert NGS reads into tags to store, map and analysis &  MAInfo
08 이수연 miRNA_GO : add pval density plot, 127 combination method, validation plot  Seminar
10 이수연 DSAP : deep-sequencing small RNA analysis     J.Club
20 이수연 Convert NGS reads into tags to store, map and analysis - workflow  MAInfo

2010-06:
01 이수연 miRNA and mRNA expression profiling from Deep sequencing data  MAInfo
08 이수연 Progress align read seqs in GSE10782  MAInfo
17 이수연 miRNA2GO : GO Enrichment analysis of clustered miRNAs by using three hypergeometric distribution  Seminar
22 이수연 RNA-seq data convert into tag count  MAInfo
28 이수연 Convert NGS reads into tags to store, map and analysis  Seminar

2010-05:
04 이수연 NGS vs. microarray  MAInfo
12 이수연 To get mRNA and miRNA profiles from RNA-Seq data  MAInfo
17 이수연 To get mRNA and miRNA profiles from RNA-seq data  Seminar
19 이수연 Systematic comparison of microarray profiling, real-time PCR, and next-generation sequencing tech. for measuring differential microRNA expression     MAInfo
25 이수연 To get Co-transcriptomics data from NGS data, and then analysis  MAInfo
29 이수연 Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms     J.Club

2010-04:
06 이수연 Apollo: a sequence annotation editor     MAInfo
06 이수연 DDBJ Read Archive and DDBJ Read Annotation Pipeline : an archive database and an analytical tool for next-generation sequence data     MAInfo
12 이수연 MAQ 예제  MAInfo
14 이수연 add personal data  MAInfo
16 이수연 maq result using human Refseq data download  MAInfo
20 이수연 NGS and co-transcriptomics  MAInfo
24 이수연 Cepred: Predicting the Co-Expression Patterns of the Human Intronic microRNAs with Their Host Genes     J.Club
27 이수연 A highly annotated whole-genome sequence of a Korean Indivisual     MAInfo

2010-03:
08 이수연 Progree in NGS data analysis - complete maq preprocessing  Seminar
13 이수연 MTar: a computational microRNA target prediction architecture for human transcriptome     J.Club
22 이수연 complete maq preprocessing & some errors using Arachne  Seminar
29 이수연 complete using MAQ and some errors using Arachne  Seminar

2010-02:
08 이수연 Plan for NGS Data replications  Seminar
22 이수연 Progress in NGS data analysis - complete preprocessing  Seminar

2010-01:
30 이수연 Targeted next-generation sequencing of a cancer transcriptome enhances detection of sequence variants and novel fusion transcripts     J.Club

2009-12:
26 이수연 Genome-Wide Transcriptional Profiling Reveals MicroRNA-Correlated Genes and Biological Processes in Human Lymphoblastoid Cell Lines     J.Club
30 이수연 GO Enrichment analysis of clustered miRNAs by using three hypergeometric distribution  Seminar

2009-11:
04 이수연 GO Enrichment analysis of clustered miRNAs by using three hypergeometric distribution - rank sum and add dataset  Seminar
25 이수연 Modify annotation of Affy_Human_Gene_1.0_ST_Array in xperanto  Seminar
28 이수연 Tissue and Process Specific microRNA-mRNA Co-Expression in Mammalian Development and Malignancy     J.Club

2009-10:
19 이수연 GO Enrichment analysis of clustered miRNAs by using three hypergeometric distribution ?rank sum  Seminar
31 이수연 Decoding global gene expression programs in liver cancer by noninvasive imaging     J.Club

2009-09:
12 이수연 TargetMiner: MicroRNA target prediction with systematic identification of tissue specific negative example     J.Club
14 이수연 GO Enrichment analysis of clustered miRNAs by using three hypergeometric distribution ?naive validation test  Seminar
28 이수연 GO Enrichment analysis of clustered miRNAs by using three hypergeometric distribution ?validation test  Seminar

2009-08:
06 이수연 GO Enrichment analysis of clustered miRNAs by using three hypergeometric distribution (2)  Seminar
24 이수연 GO Enrichment analysis of clustered miRNAs by using three hypergeometric distribution ?breast and colon cancer  Seminar
26 이수연 Web-Based Resources for Clinical Bioinformatics  BookReading

2009-07:
02 이수연 GO annotation of miRNAs by using hypergeometric distribution?developing methods  Seminar
20 이수연 GO Enrichment analysis of clustered miRNAs by using three hypergeometric distribution  Seminar
25 이수연 MicroRNA and mRNA integrated analysis (MMIA): a web tool for examining biological functions of microRNA expression     J.Club

2009-06:
15 이수연 GO annotation for clustered miRNAs  Seminar
17 이수연 Evaluating DNA Sequence Variants of Unknown Biological Significance  BookReading
20 이수연 GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists     J.Club

2009-05:
06 이수연 Microarrays - Planning Your Experiment  BookReading
09 이수연 Quality Assessment and Data Analysis for microRNA expression Arrays     J.Club
11 이수연 Stem cell microRNA microarray analysis - modify xperanto SOM cluster analysis module  Seminar
28 이수연 stem cell miRNA microarray analysis - GO annotation in xperanto  Seminar

2009-04:
06 이수연 Osteoporosis Data Analysis - 변수정리  Seminar
23 이수연 Stem cell miRNA microarray analysis  Seminar

2009-03:
16 이수연 Predict miRNA expression profiles from mRNA expressions using machine learning - purpose of this study  Seminar
28 이수연 Comparison of normalization methods with microRNA microarray     J.Club

2009-02:
05 이수연 Predict microRNA expressions from mRNA expression profiles using NN - select best features  Seminar
26 이수연 Predict let-7 microRNA expressions from mRNA expression profiles using NN - select best features (2)  Seminar
28 이수연 MicroRNA target prediction by expression analysis of host genes     J.Club

2009-01:
02 이수연 Predict miRNA expression profiles from mRNA expressions using NN - determine the number of iteration  Seminar
15 이수연 Predict mRNA expression profile from miRNA expressions using ANN - GA feature selection  Seminar
17 이수연 Genomic Profiling of MicroRNA and Messenger RNA Reveals Deregulated MicroRNA Expression in Prostate Cancer     J.Club

2008-12:
11 이수연 Predict miRNA expression profiles from mRNA expression - various miRNA family set test  Seminar
13 이수연 Global correlation analysis for micro-RNA and mRNA expression profiles in human cell lines     J.Club

2008-11:
03 이수연 Predict microRNA expressions from mRNA expression profiles using NN  Seminar
15 이수연 An Integrative Analysis of microRNA and mRNA Expression - A Case Study     J.Club
24 이수연 Predict microRNA expression profiles from mRNA expression using Machine Learning  Seminar
27 이수연 Predict microRNA expressions from mRNA expression profiles Using Neural Network ?plan  Seminar

2008-10:
11 이수연 The roles of binding site arrangement and combinatorial targeting in microRNA repression of gene expression     J.Club
16 이수연 NN analysis using let-7 microRNAs and their target mRNAs their target mRNAs  Seminar

2008-09:
08 이수연 Compare the clustering performance using mRNA/miRNA expression profiles  Seminar
29 이수연 Predict microRNA expression profiles from mRNA expressions using NN  Seminar

2008-08:
07 이수연 Summary of co-transcriptomics datasets  Seminar
16 이수연 mRNA/microRNA gene expression profile in microsatellite unstable colorectal cancer     J.Club
25 이수연 First Plan using miRNA/mRNA expression profile datasets  Seminar

2008-07:
14 이수연 Co-transcriptomics : comprehensive analysis of microRNA and mRNA expression  Seminar
21 이수연 Differential responses to ionizing radiation in two lung cancer cell lines (2)  Seminar
26 이수연 Prediction of both conserved and nonconserved microRNA     J.Club

2008-06:
13 이수연 collect datasets for co-transcriptomics  Seminar
27 이수연 Differential responses to ionizing radiation in two lung cancer cell lines (time=0)  Seminar
28 이수연 Genomic and epigenetic alterations deregulate microRNA expression in human epithelial ovarian cancer     J.Club

2008-05:
02 이수연 CCD 데이터 정리 보고  Seminar
03 이수연 Computational analysis of biological functions and pathways     J.Club
23 이수연 co-regulation btw miRNA and mRNA  Seminar
31 이수연 The microRNA.org resource:targets and expression     J.Club

2008-04:
05 이수연 MicroRNA acuurately identify cancer tissue origin     J.Club
18 이수연 원자력 miRNA 데이터 분석 보고  Seminar

2008-03:
14 이수연 Mining co-regulated gene profiles for the detection of functional associations in gene expression data  Seminar
31 이수연 N2a microRNA  Seminar

2008-02:
23 이수연 A comparison of meta-analysis methods for detecting differentially expressed genes in microarray experiments     J.Club
26 이수연 Mining co-regulated genes  Seminar

2008-01:
11 이수연 advanced idea extracting gene expression pattern  Seminar
12 이수연 Mining co-regulated gene profiles for the detection of functional associations in gene expression data     J.Club
25 이수연 Progress in CCD data and mining co-regulated genes  Seminar

2007-12:
04 이수연 AB Human Genome Survey Microarray V2.0 annotation & Result of CCD analysis  Seminar
15 이수연 Cancer immunomics: Using autoantibody signatures in the early detection of prostate cancer     J.Club
18 이수연 AB annotation  Seminar
28 이수연 Feature selection and Rule extraction of time series  Seminar

2007-11:
13 이수연 Feature selection and classification of time series microarray using GP 2nd idea  Seminar

2007-10:
06 이수연 Feature Selection and Molecular Classification of Cancer Using Genetic Programming     J.Club
09 이수연 Feature selection of time series microarray using GP  Seminar
30 이수연 Advanced idea for feature selection of time series microarray Using GP  Seminar

2007-09:
01 이수연 GPDTI A Genetic Programming Decision Tree Induction method to find epistatic effects in common complex diseases     J.Club
18 이수연 Microarray Feature Selection using GP  Seminar

2007-08:
10 이수연 Data analysis 한혁수 교수,CCD data  Seminar
31 이수연 ISMB2007 Review - microarray  Seminar

2007-07:
07 이수연 maSigPro: a Method to Identify Significantly Differential Expression Profiles in Time-Course Microarray Experiments     J.Club
11 이수연 CCD 데이터 분석 상황  Seminar
27 이수연   Seminar

2007-06:
01 이수연 CCD 데이터 분석 계획  Seminar
16 이수연 Significance analysis of mcroarray transcript levels in time series experiments     J.Club
22 이수연 CCD 데이터 분석 보고  Seminar

2007-04:
28 이수연 Modeling Nonlinearity in Dilution Design Microarray Data [microarraydilution]      J.Club

2007-03:
10 이수연 A Five-Gene Signature and Clinical Outcome in Non-Small-Cell Lung Cancer       J.Club

2005-06:
01 이수연 가톨릭대 글리벡 데이터 분석  MAInfo
28 이수연 글리벡 데이터 분석 및 ABI 분석  xMutant

2005-04:
12 이수연 독성유전체 데이터 분석  xMutant
20 이수연 ENU 데이터 분석  MAInfo

2005-03:
02 이수연 AB microarray 분석(2)  MAInfo
04 이수연 NA  xMutant
23 이수연 ABI chip 분석 진행 상황 (2-way ANOVA 이용한 Gene Filtering작업)  MAInfo

2005-02:
14 이수연 A comparison of normalization methods for high density oligonucleotide array data based on variance and bias       J.Club

2005-01:
05 이수연 Ontologizer Review  MAInfo
26 이수연 AB microarray 분석  MAInfo
29 이수연 AB microarray 분석 [MAInfo] Seminar

2004-12:
15 이수연 Normalization이후 microarray 데이터 분석  MAInfo

2004-11:
17 이수연 Research plan  MAInfo

2004-10:
13 이수연 A genetic Approach for Gene Selection on Microarray Expression data  MAInfo

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