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2023-11:
02 임성수   TopicSem
02 부은경   TopicSem
04 이시은 J.Club
04 배소정 J.Club
06 박유미   TopicSem
06 차재현   TopicSem
09 이시은   TopicSem
09 전예진   TopicSem
11 부은경 J.Club
11 조민아 J.Club
13 안세환   TopicSem
13 권호식   TopicSem
16 최선   TopicSem
16 윤미선   TopicSem
18 임성수 J.Club
18 유준기 J.Club
20 배소정   TopicSem
20 조민아   TopicSem
23 유준기   TopicSem
23 부은경   TopicSem
25 안세환 J.Club
25 권호식 J.Club
27 임성수   TopicSem
27 박유미   TopicSem
30 차재현   TopicSem
30 이시은   TopicSem

2023-10:
02 ... 임시공휴일  TopicSem
02 ... 임시공휴일  TopicSem
05 유준기   TopicSem
05 부은경   TopicSem
07 이시은 J.Club
07 안세환 J.Club
09 ... 한글날  TopicSem
09 ... 한글날  TopicSem
12 임성수   TopicSem
12 박유미   TopicSem
14 최선 J.Club
14 권호식 J.Club
16 차재현   TopicSem
16 이시은   TopicSem
19 전예진   TopicSem
19 안세환   TopicSem
21 임성수 J.Club
21 윤미선 J.Club
23 권호식   TopicSem
23 최선   TopicSem
26 윤미선   TopicSem
26 배소정   TopicSem
28 차재현 J.Club
28 전예진 J.Club
30 조민아   TopicSem
30 유준기   TopicSem

2023-09:
02 최선 PhenoScore quantifies phenotypic variation for rare genetic diseases by combining facial analysis with other clinical features using a machine-learning framework     J.Club
02 차재현 Large mosaic cnv confer autism risk     J.Club
04 조민아 Network properties and community analysis of Ulcerative colitis extension  TopicSem
04 유준기 Synthetic rescue analysis using TCGA and ADSP data  TopicSem
06 유준기 TCGA PanCanAtlas data  MAInfo
07 부은경 Variant- and gene-wise analyses of Parkinson’s disease  TopicSem
07 임성수 Identifying synthetic anti-metastasis pairs from TCGA COAD and READ  TopicSem
09 윤미선 Assessment of clinically actionable pharmacogenetic markers to stratify anti-seizure medications     J.Club
09 배소정 Genome-wide association study identifies new loci associated with risk of HBV infection and disease progression     J.Club
11 박유미 Preprocessing of PacBio whole genome sequencing data  TopicSem
11 차재현 .Replication : Clustering by phenotype and genome-wide association study in autism   TopicSem
13 배소정 Phylogenetic analysis  MAInfo
14 이시은 Defining the distance between diseases using SNOMED CT embeddings (Replication)  TopicSem
14 전예진 Mendelian Randomization as a tool to support pgx     TopicSem
16 부은경 Extremely sparse models of linkage disequilibrium in ancestrally diverse association studies     J.Club
16 조민아 Genetic Structure and Forensic Feature of 38 X-Chromosome InDels in the Henan Han Chinese Population     J.Club
18 안세환 Star-allele associated haplogroups of 25 pharmacogenes  TopicSem
18 권호식 Candidate genomic variations in patients with adverse reactions to contrast media  TopicSem
18 임성수 Identifying SAM pairs from TCGA dataset  SysBiol
21 최선 Survival analysis of colon cancer screening test implementation  TopicSem
21 윤미선 Population-Specific Pharmacogenetic Profiling in South Korean Population: Genotype-Based Drug Interventions   TopicSem
23 유준기 Allelic imbalance of chromatin accessibility in cancer identifies candidate causal risk variants and their mechanisms     J.Club
23 전예진 Mendelian randomization analyses support causal relationships between blood metabolites and the gut microbiome     J.Club
25 배소정 Genome wide association study about susceptibility to bacterial and viral infection  TopicSem
25 조민아 Change study design of IBD compared with healthy people  TopicSem
28 ... 추석연휴  TopicSem
28 ... 추석연휴  TopicSem
30 ... 추석연휴  J.Club
30 ... 추석연휴  J.Club

2023-08:
02 배소정 One-stage object detectors  MAInfo
02 배소정 One-stage object detectors  MAInfo
03 안세환 Summarize the results of haplogroups  TopicSem
03 권호식 Busulfan and Hepatic veno-occlusive disease  TopicSem
05 부은경 Leveraging polygenic enrichments of gene features to predict genes underlying complex traits and diseases     J.Club
05 차재현 Sex-dependent shared and nonshared Genetic Architecture across mood and psychotic disorders     J.Club
07 최선 Query design for DNET analysis  TopicSem
07 윤미선 Exploring WES data of CKD cohort (EPO resistance)  TopicSem
07 임성수 Identifying SAM pairs - calculate GVB by defining LOF mutations  SysBiol
10 배소정 A genome-wide association study identifies multiple loci associated with susceptibility to bacterial and viral infections  TopicSem
10 조민아 Integrated interpretation of single variant analysis and pair-gvb analysis in extension of ulcerative colitis  TopicSem
12 안세환 Chracterizing the combined effects of cytochrome P450 missense variation within star allele definitions     J.Club
12 권호식 Single-cell transcriptome profiling of the stepwise progression of head and neck cancer     J.Club
14 유준기 Biased genetic predisposition in cancer and neurodegeneration  TopicSem
14 부은경 Variant- and gene-wise analyses of PD  TopicSem
16 권호식 AnnotSV: Annotation of Human Structural Variations  MAInfo
17 임성수 Identifying synthetic anti-metastasis gene pairs from TCGA  TopicSem
17 박유미 Research outline of the Human Disease Genome Map construction project  TopicSem
19 조민아 A powerful method for pleiotropic analysis under composite null hypothesis identifies novel shared loci between Type 2 Diabetes and Prostate Cancer     J.Club
19 배소정 Genome-wide study on 72,298 individuals in Korean biobank data for 76 traits      J.Club
21 차재현 Study of ASD  TopicSem
21 전예진 Mendelian randomization as a tool to support PGx  TopicSem
21 조민아 Code for network analysis of pair-wide gvb   SysBiol
23 차재현 genomic studies of ASD  MAInfo
24 이시은 (replication) Defining the distance between diseases using SNOMED-CT embeddings  TopicSem
24 안세환 Association between haplogroups and star-alleles in 1KGP  TopicSem
26 임성수 Identification of core genes and pathways in melanoma metastasis via bioinformatics analysis     J.Club
26 유준기 An allelic-series rare-variant association test for candidate-gene discovery     J.Club
28 권호식 Summary of Results for Pharmacogenomic Study of Contrast media-induced adverse reactions   TopicSem
28 최선 Dnet data analysis  TopicSem
30 윤미선 Visualizing genomic information across chromosomes with PhenoGram  MAInfo
31 윤미선 Population-Specific Pharmacogenetic Profiling in South Korean Population: Genotype-Based Drug Interventions   TopicSem
31 배소정 A genome-wide association study identifies multiple loci associated with susceptibility to bacterial and viral infections  TopicSem

2023-07:
01 조민아 From gene to dose: Long-read sequencing and *-allele tools to refine phenotype predictions of CYP2C19     J.Club
01 배소정 A cross-population atlas of genetic associations for 220 human phenotypes     J.Club
03 전예진 review_pgx of BRONJ  TopicSem
03 안세환 Constructing Haplogroups for Pharmacogenes  TopicSem
03 임성수 Identifying SAM pair from TCGA-SKCM  SysBiol
05 차재현 Network characteristics and clustering  MAInfo
06 이시은 Defining the distance between diseases using SNOMED CT embeddings (Replication)  TopicSem
06 차재현 .  TopicSem
08 임성수 Harnessing synthetic lethality to predict the response to cancer treatment     J.Club
08 유준기 Prioritizing autoimmunity risk variants for functional analyses by fine-mapping mutations under natural selection     J.Club
10 최선 Question answering task using aact db  TopicSem
10 윤미선 Population-Specific Pharmacogenetic Profiling in South Korean Population: Genotype-Based Drug Interventions  TopicSem
10 조민아 Code of trend of GVB in m-core analysis  SysBiol
12 윤미선 EPO resistance index design & Mixed Effects Model  MAInfo
13 배소정 A genome‐wide association study about susceptibility to bacterial and viral infections  TopicSem
13 조민아 M-core analysis of GVB in pair with cutoff of improvement p value ratio   TopicSem
15 안세환 PharmaGScore scores of compound genetic variant burden for psychiatric treatment optimization     J.Club
15 권호식 Cell type prioritization in single-cell data     J.Club
17 유준기 Inverse relationship and positive selection in Cancer and Neurodegeneration  TopicSem
17 부은경 K-core decomposition analysis using PPMI dataset  TopicSem
20 임성수 Identifying synthetic anti-metastasis gene pairs from TCGA  TopicSem
20 박유미 Deciphering sequence-structure-function relationships to predict individual drug-intolerance with minimal uncertainty  TopicSem
22 최선 Medical Question Understanding and Answering with Knowledge Grounding and Semantic Self-Supervision     J.Club
22 윤미선 The pharmacogenomic landscape of an Indigenous Australian population     J.Club
24 인턴 이수민-TTN mutation in Colorectal Cancer Patients and Future Studies  TopicSem
24 인턴 Journal review and replication trial  TopicSem
24 인턴 노서준 - Web Development: Federated Learning System for Breast mass segmentation in ultrasound  TopicSem
26 유준기 Positive selection scoring method  MAInfo
27 이시은 Defining the distance between diseases using SNOMED CT embeddings (Replication)  TopicSem
27 Lilia INFLUENCE OF THE FAMILY HISTORY OF DEPRESSION IN THE CLINICAL CONSEQUENCES OF DEPRESSION  TopicSem
29 이시은 Improving graph embeddings via entity linking: A case study on Italian clinical notes     J.Club
29 전예진 Genetic validation of neurokinin 3 receptor antagonist for IHD prevention in men     J.Club
31 차재현 Genomic study of Major Depressive Disorder  TopicSem
31 전예진 Genetic validation of Antiepileptic drugs for Parkinson disease  TopicSem

2023-06:
01 박유미 Study design to identify candidate genetic variants associated with cervical insufficiency  TopicSem
01 Lilia DEPRESSION DATASET ANALYSIS PT2  TopicSem
03 최선 biomedgpt  J.Club
03 권호식 STOmicsDB: a database of Spatial Transcriptomic data     J.Club
05 차재현   TopicSem
05 이시은 CKD Variants Analysis  TopicSem
05 조민아 igraph: r package for network graph (code)   SysBiol
05 조민아 igraph: r package for network graph (code)   SysBiol
05 조민아 igraph: r package for network graph (code)   SysBiol
07 유준기 Computational genomic approaches to interpret non-coding disease risk variants  MAInfo
08 전예진 Natural selection of pharmacogene in UK biobank  TopicSem
08 안세환 Identifications of associations between star alleles and haplogroups  TopicSem
10 임성수 Synthetic lethality-mediated precision oncology via the tumor transcriptome     J.Club
10 윤미선 Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity      J.Club
12 권호식 Copy number variations in Patients receiving contrast media  TopicSem
12 최선 Query design for Dnet analysis   TopicSem
14 최선 R packages for ML  MAInfo
15 윤미선 Exploring WES data of CKD cohort   TopicSem
15 조민아 Network analysis of pair-wise gvb in UC extension comparison  TopicSem
17 부은경 Genetic studies of paired metabolomes reveal enzymatic and transport processes at the interface of plasma and urine     J.Club
17 전예진 Assessing Digital Phenotyping to Enhance Genetic Studies of Human Diseases  J.Club
19 임성수 Identifying synthetic anti-metastasis gene pairs from TCGA-SKCM  TopicSem
19 유준기 Molecular genetic features of Cancer Predisposition Genes (CPG) and Alzheimer's Disease Genes  TopicSem
21 배소정 Heterogeneous response to Glucocorticoids in breast cancer cells  MAInfo
22 부은경 Pair gvb-based network analysis in parkinson’s disease  TopicSem
22 배소정 genome wide association study about infection disease  TopicSem
24 이시은 Defining the distance between diseases using SNOMED CT embeddings     J.Club
24 차재현 .     J.Club
26 박유미 Investigating gene-pairs contributing to cervical insufficiency  TopicSem
26 권호식 Copy number variations in patients receiving contrast media  TopicSem
28 권호식 Performance of CNV callers for WES data  MAInfo
29 Lilia Overview of depression dataset analysis process and future considerations  TopicSem
29 이시은 Defining the distance between diseases using SNOMED CT embeddings   TopicSem

2023-05:
01 차재현 Genome-wide association of polygenic risk extremes for Alzheimer  TopicSem
01 배소정 A genome‐wide association study in a large community‐based cohort identifies multiple loci associated with susceptibility to bacterial and viral infections  TopicSem
03 배소정 Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies  MAInfo
04 박유미 Identification of candidate gene variants associated with cervical insufficiency  TopicSem
04 부은경 Progress of pair-gvb analysis in PD patients  TopicSem
06 배소정 Infectious disease outbreak prediction using machine learning articles with machine learning models     J.Club
06 조민아 Participation bias in the UK Biobank distorts genetic associations and downstream analyses     J.Club
08 Lilia DEPRESSION DATASET ANALYSIS  TopicSem
08 이시은 CKD Patients’ Variants Analysis   TopicSem
10 권호식 Busulfan and Adverse Drug Events  MAInfo
11 전예진 GWAS in complex disease and pharmacogenomics  TopicSem
11 안세환 Association between haplogroups and star-alleles  TopicSem
13 부은경 Inference of chronic obstructive pulmonary disease with deep learning on raw spirograms identifies new genetic loci and improves risk models     J.Club
13 안세환 A novel machine learning-based approach for the computational functional assessment of pharmacogenomic variants     J.Club
15 권호식 Further analysis for candidate genes derived from CNV analysis in CTM  TopicSem
15 최선 sun_colon_cancer  TopicSem
15 임성수 (Replication) Identifying SAM pairs from TCGA-COAD patients  SysBiol
18 윤미선 CKD cohort grouping by EPO responsiveness  TopicSem
18 조민아 Differences in GVB at variant levels when comparing UC with 1000 genome project data  TopicSem
20 이시은 The Effect of Genotyping on the Number of Pharmacotherapeutic Gene–Drug Interventions in Chronic Kidney Disease Patients     J.Club
20 유준기 The genetic deteriminants of recurrent somatic mutations in 43,693 blood genomes     J.Club
22 배소정 Genome wide association study about bacterial and viral infections  TopicSem
22 유준기 Rare variants and deleterious variants in Cancer predisposition Genes (CPG) and Alzheimer associated Genes  TopicSem
24 차재현 GWA Studies with UKBB data  MAInfo
25 부은경 Single- and pair-gvb analysis in Parkinson’s disease  TopicSem
25 임성수 (Replication) Identifying SAM pairs from TCGA-SKCM patients  TopicSem
27 ... 부처님 오신날  J.Club
27 ... 부처님 오신날  J.Club
29 ... 대체공휴일  TopicSem
29 ... 대체공휴일  TopicSem

2023-04:
01 이시은 Novel Genetic Variants Associated with Chronic Kidney Disease Progression     J.Club
01 조민아 A comparison of the genes and genesets identified by GWAS and EWAS of fifteen complex traits     J.Club
02 임성수 (Replication) Overall process of identifying SAM gene pairs from TCGA  SysBiol
03 배소정 A genome‐wide association study in a large community‐based cohort identifies multiple loci associated with susceptibility to bacterial and viral infections  TopicSem
03 유준기 Comparing Cancer predisposition gene (CPG) and Alzheimer associated genes  TopicSem
05 최선 GWAS  MAInfo
06 부은경 Identifying gene pairs associated with Parkinson’s disease  TopicSem
06 임성수 (Replication) Identifying synthetic anti-metastatis gene pairs  TopicSem
08 안세환 A unifying model to predict variable drug response for personalised medicine.     J.Club
08 유준기 Identifying interpretable gene-biomarker associations with functionally informed kernel-based tests in 190,000 exomes     J.Club
10 박유미 Importance of rare pharmacogenomic variants in interpreting drug response  TopicSem
10 차재현 Analyzing Genomic Data from the 1000 Genomes Project  TopicSem
13 Lilia CADD scoring for depression data  TopicSem
13 이시은 CKD,NSAID,PPI and Comparison with the Control  TopicSem
15 임성수 Clinical and bionarker analyses of sintilimab plus gemcitabine and cisplatin as first-line treatment for patients with advanced biliary tract cancer     J.Club
15 권호식 Confronting false discoveries in single-cell differential expression     J.Club
17 전예진 Association between AEDs and incident PD in the UK Biobank  TopicSem
17 안세환 Distribution of haplogroups and star-alleles  TopicSem
17 조민아 Downloading data using pyega3  SysBiol
20 권호식 Potential genomic variations related with adverse effects of contrast media  TopicSem
20 윤미선   TopicSem
22 전예진 Global Biobank Meta-analysis Initiative_Powering genetic discovery across human disease     J.Club
22 차재현 Single-nucleus gene and gene set expression-based similarity network fusion identifies autism molecular subtypes     J.Club
24 최선 Research idea using clinical trials DB  TopicSem
24 유준기 Rare variants in Cancer predisposition Gene (CPG) and Alzheimer associated genes  TopicSem
26 유준기 Single-cell whole genome sequencing (scWGS) in degenrative diseases  MAInfo
27 조민아 Cases between GVB and pair wise GVB in UC patients  TopicSem
27 임성수 (Replication) Identifying synthetic anti-metastatis gene pairs for COAD  TopicSem
29 최선 GPT4     J.Club
29 윤미선   J.Club

2023-03:
02 권호식 Variants in two candidate genes related with adverse effects of contrast media  TopicSem
02 조원일 pgwatch_database  TopicSem
02 권호식   TopicSem
02 최선 RD1  MAInfo
04 권호식 Association of Genetic Ancestry and Molecular Signatures with Cancer Survival Disparities: A Pan-Cancer Analysis     J.Club
04 유준기 Germline mutations in mitochondrial complex I reveal genetic and targetable vulnerability in IDH1-mutant acute myeloid leukaemia     J.Club
06 최선 Cohort analysis for the retinal detachment research using UKB  TopicSem
06 배소정 Replication: A genome‐wide association study in a large community‐based cohort identifies multiple loci associated with susceptibility to bacterial and viral infections  TopicSem
09 윤미선 Study design using WES of CKD (EPO resistance)  TopicSem
09 조민아 exploring pair-wise GVB score in UC patients  TopicSem
09 윤미선 Study design using WES of CKD (EPO resistance)  TopicSem
09 조민아 exploring pair-wise GVB score in UC patients  TopicSem
09 윤미선 Diffusion model  MAInfo
09 윤미선 Diffusion model  MAInfo
11 최선 Language Is Not All You Need: Aligning Perception with Language Models     J.Club
11 윤미선 Diffusion Models for Implicit Image Segmentation Ensembles     J.Club
13 유준기 Distribution of allele frequency and Insilico scores in Cancer Predisposition Gene (CPG)  TopicSem
13 부은경 Study design using PWGVB in patients with PD  TopicSem
15 유준기 LRT-q: Rare variant association test for gene expression in multiple tissues  MAInfo
16 박유미 Investigating gene-pairs contributing to sex differences in depression  TopicSem
16 Lilia OVERVIEW OF THE DEPRESSION DATASET ANALYSIS AND FUTURE CONSIDERATIONS  TopicSem
16   TopicSem
16   TopicSem
18 전예진 A 12-gene pharmacogenetic panel to prevent adverse drug reactions_an open-label, multicentre, controlled, cluster-randiomised crossover implementation study     J.Club
18 조원일 Utility of long-read sequencing for All of Us     J.Club
20 이시은 Comparison of genotypes between CKD patients and the Control  TopicSem
20 권호식 Potential genomic variations related with adverse effects of contrast media  TopicSem
23 안세환 Identifying associations between haplogroups and star-alleles  TopicSem
23 조원일 concordance of star calling and GeT-RM  TopicSem
23   TopicSem
23   TopicSem
25 배소정 Single-cell RNA sequencing reveals a heterogeneous response to Glucocorticoids in breast cancer cells     J.Club
25 부은경 Network expansion of genetic associations defines a pleiotropy map of human cell biology     J.Club
27 전예진 pgx-passport  SysBiol
27 전예진 Association between AEDs and incident PD in the UK Biobank  TopicSem
27 최선 Cohort analysis for the retinal detachment research using UKB  TopicSem
29 권호식 Cell types and Functions  MAInfo
30 윤미선 Exploring WES data of CKD cohort  TopicSem
30 조민아 Classifying Bladder cancer patients using gene set identified by SCISSOR  TopicSem

2023-02:
02 조민아 Replication of UC candidates in 100 UC patients  TopicSem
02 유준기 Classification and characterization of Cancer Predisposition Gene (CPG) variants  TopicSem
04 전예진 Association Between Antiepileptic Drugs and Incident Parkinson Disease in the UK Biobank     J.Club
04 김나영 A State-of-the Art Review of SNOMED CT Terminology Binding and Recommendations for Practice and Research     J.Club
06 임영균   TopicSem
06 부은경 PPMI Data Overview  TopicSem
09 박유미 Real-world data analysis of warfarin dose-associated variants of CYP2C9 and VKORC1 in subjects with unclear molecular phenotypes  TopicSem
09 이시은 Distribution Graph of CKD Patients Genotypes  TopicSem
09 권호식 Cell markers and Stem cells  MAInfo
11 부은경 Pairwise effects between lipid GWAS genes modulate lipid plasma levels and cellular uptake     J.Club
11 임영균 Mono- and biallelic variant effects on disease at biobank scale     J.Club
13 인턴 Variant filtering workflow in 1000 depression dataset  TopicSem
13 전예진 Association between AEDs and incident PD in the UK Biobank  TopicSem
13 조민아 RNA-seq deconvolution  SysBiol
16 ... GDA  TopicSem
16 ... GDA  TopicSem
18 안세환 Identification and functional validation of novel pharmacogenomic variants using a next-generation sequencing-based approach for clinical pharmacogenomics     J.Club
18 조민아 An Improved Phenotype-Driven Tool for Rare Mendelian Variant Prioritization: Benchmarking Exomiser on Real Patient Whole-Exome Data     J.Club
20 ... GDA  TopicSem
20 ... GDA  TopicSem
23 ... GDA  TopicSem
23 ... GDA  TopicSem
25 이시은 Impact of SGLT2 inhibitors on old age patients with heart failure and chronic kidney disease     J.Club
25 배소정 Genetic common variants associated with cerebellar volume and their overlap with mental disorders: a study on 33,265 individuals from the UK-Biobank     J.Club
27 김나영 Semantic enrichment of Data Elements using ChatGPT  TopicSem
27 안세환 Identifying novel functional PGx variants based on haplogroup  TopicSem

2023-01:
02 유준기 Characteristics of Cancer predisposition gene (CPG) variants in the general population  TopicSem
02 임영균 Analysis of metastatic potential by somatic mutations in cancer cell  TopicSem
05 부은경 Research Idea for Neurodegenerative Diseases  TopicSem
05 박유미 Replication study of the association of rs4653328 (EPHA10) with cervical insufficiency  TopicSem
05 안세환 test     SysBiol
07 배소정 The landscape of host genetic factors involved in immune response to common viral infections     J.Club
07 조원일 Discovery and systematic characterization of risk variants and genes for coronary artery disease in over a million participants      J.Club
09 이시은 Chronic Kidney Disease and DialysisNet  TopicSem
09 전예진 variant-wise analysis to discover phenytoin adverse reaction related genes  TopicSem
12 안선주 Pharmacogenomics Watch(PGWatch) - Intro, Terms, DB  TopicSem
12 김나영 Master's thesis revisions  TopicSem
14 유준기 The impact of rare germline variants on human somatic mutation processes     J.Club
14 권호식 Computational comparison of common event based differential splicing tools     J.Club
16 안세환   TopicSem
16 최선 SUN_CKD  TopicSem
19 인턴 ANALYSIS OF A DATASET OF 1000 SOUTH KOREAN DEPRESSIVE PATIENTS  TopicSem
19 인턴   TopicSem
19 유준기 Histological category of cancer and classification of Cancer predisposition genes  MAInfo
21 ... 설날  J.Club
21 ... 설날  J.Club
23 ... 설날  TopicSem
23 ... 설날  TopicSem
26 조원일 Starallele_calling 4_healthshowcase data  TopicSem
26 권호식 Candidate genes related with adverse effects of contrast media  TopicSem
28 최선 Temporal phenotyping using Deep predictive clustering of disease progression     J.Club
28 윤미선 Identification of pathogenic genes associated with CKD: An integrated bioinformatics approach     J.Club
30 윤미선 Pharmacogenomic Profile of Korean population using whole genome sequencing (HLA)  TopicSem
30 배소정 Replication: A genome‐wide association study in a large community‐based cohort identifies multiple loci associated with susceptibility to bacterial and viral infections   TopicSem

2022-12:
01 ... GDA  TopicSem
01 ... GDA  TopicSem
03 부은경 An integral genomic signature approach for tailored cancer therapy using genome-wide sequencing data     J.Club
03 권호식 Association of altered folylpolyglutamate synthetase pre-mRNA splicing with methotrexate unresponsiveness in early rheumatoid arthritis     J.Club
05 조민아 Single cell analysis in Bladder cancer  TopicSem
05 유준기 Rare variant analysis with gene tolerance  TopicSem
08 임영균   TopicSem
08 부은경 Evaluation of pharmacogenetic influences on thiopurine-induced leukopenia in patients with inflammatory bowel disease (Results)  TopicSem
08 배소정 Rare-Variant Association Analysis: Study Designs and Statistical Tests  MAInfo
10 최선 Association of Genome-Wide Polygenic Scores for Multiple Psychiatric and Common Traits in Preadolescent Youths at Risk of Suicide     J.Club
10 김나영 Harvesting metadata in clinical care: a crosswalk between FHIR, OMOP, CDISC and openEHR metadata     J.Club
12 박유미 Comparison of average daily drug dose between subjects with unclear molecular phenotypes and non-ambiguous normals  TopicSem
12 전예진 Active surveillance of AEDs using RWD  TopicSem
15 이시은 Natural Language Processing in Clinical Data  TopicSem
15 김나영 Master's thesis revisions  TopicSem
17 윤미선 EagleImp: fast and accurate genome-wide phasing and imputation in a single tool     J.Club
17 임영균 Genetic risk factors have a substantial impact on healthy life years      J.Club
19 정문경 CDEs for modeling meaningful clinical documents to achieve semantic interoperability  TopicSem
19 안세환 Identify novel variants in haplogroup  TopicSem
22 조원일 The result of pharmacogene in healthshowdata and PGwatch  TopicSem
22 권호식 Candidate variants related with adverse effects of contrast media  TopicSem
22 최선 Time series in healthcare_1  MAInfo
24 전예진 Loss of function, gain of function and dominant negative mutations have profoundly different effects on protein structure     J.Club
24 조민아 Gene Size Matters: An Analysis of Gene Length in the Human Genome     J.Club
26 최선 K-cdm Research design  TopicSem
26 윤미선 Pharmacogenomic Profile of Korean population using WGS  TopicSem
26 전예진 FoldX_variant stability and effect prediction  SysBiol
29 배소정 Infection disease genetic analysis with UK Biobank  TopicSem
29 조민아 Single cell analysis in bladder cancer and troubleshooting  TopicSem
31 안세환 Evaluating the frequency and the impact of pharmacogenetic alleles in an ancestrally diverse Biobank population     J.Club
31 이시은 A pre-trained BERT for Korean medical natural language processing     J.Club

2022-11:
03 부은경 Evaluation of pharmacogenetic influences on thiopurine-induced leukopenia in patients with inflammatory bowel disease (Results with figures)  TopicSem
03 박유미 Distribution of unclear molecular phenotypes for genes with published CPIC guidelines in UK Biobank  TopicSem
03 최선 Data valuation  MAInfo
05 조원일 The genetic landscape of major drug metabolizing cytochrome P450 genes an updated analysis of population scale sequencing data      J.Club
05 임영균 Pan-Cancer Analysis of Potential Synthetic Lethal Drug Targets Specific to Alterations in DNA Damage Response     J.Club
07 이시은 Intro to Natural Language Processing in Clinical Data  TopicSem
07 전예진 active surveillance of phenytoin using UK biobank  TopicSem
09 김나영 Covid-19 vaccination and menstrual cycle length in the Apple Women’s Health Study  BioEMR
10 정문경 빈즈 8주 교육 프로그램 임상연구 현황  TopicSem
10 김나영 Plotting results of unique CDE from 10 hospitals  TopicSem
10 윤미선 A gene set-integrated approach for predicting disease-associated genes  MAInfo
12 정문경 Association of step counts over time with the risk of chronic disease in the All of Us Research Program     J.Club
12 유준기 The mutational signatures of formalin fixation on the human genome     J.Club
14 안세환 Enrichment analysis of haplogroups  TopicSem
14 조원일 star allele caller  TopicSem
17 권호식 Candidate variant related with adverse effects of contrast media  TopicSem
17 최선 sun_kcdm  TopicSem
17 유준기 Disease-gene Database: DisGeNET  MAInfo
19 이시은 Extracting seizure frequency from epilepsy clinic notes: a machine reading approach to natural language processing     J.Club
19 안세환 PharmaKU: A web-based tool aimed at improving outreach and clinical utility of pharmacogenomics     J.Club
21 윤미선 Study design using WES of CKD (EPO resistance)  TopicSem
21 배소정 Infection disease genetic analysis with UK Biobank  TopicSem
21 조민아 SCISSOR: tutorial  SysBiol
24 ... GDA  TopicSem
24 ... GDA  TopicSem
26 조민아 Identifying phenotype-associated subpopulations by integrating bulk and single-cell sequencing data     J.Club
26 배소정 Frequency and Phenotype Associations of Rare Variants in 5 Monogenic Cerebral Small Vessel Disease Genes in 200,000 UK Biobank Participants      J.Club
28 ... GDA  TopicSem
28 ... GDA  TopicSem

2022-10:
01 배소정 Ultrafast search of all deposited bacterial and viral genomic data     J.Club
01 안세환 Aldy 4:An efficient genotypes and star-allele caller for pharmacygenomics     J.Club
03 ... 개천절  TopicSem
03 ... 개천절  TopicSem
03 ... 개천절  SysBiol
06 부은경 Evaluation of pharmacogenetic influences on thiopurine-induced leukopenia in patients with inflammatory bowel disease (Methods)  TopicSem
06 이시은 Natural Language Processing in clinical data  TopicSem
08 유준기 Identifying disease-critical cell types and cellular processes by integrating single-cell RNA-sequencing and human genetics     J.Club
08 권호식 Identification of differentially expressed genes in lung adenocarcinoma cells using single-cell RNA sequencing not detected using traditional RNA sequencing and microarray     J.Club
10 ... 대체공휴일  TopicSem
10 ... 대체공휴일  TopicSem
10 ... 대체휴일  SysBiol
13 김나영 Common data elements for modeling meaningful clinical documents to achieve semantic interoperability  TopicSem
13 정문경   TopicSem
15 이우승 Impact of integrating genomic data into the electronic health record on genetics care delivery     J.Club
15 윤미선 Returning individual genomic results to population‑based cohort study participants with BRCA1/2 pathogenic variants     J.Club
17 전예진 Rare genetic variants can be important determinants of interindividual differences  TopicSem
17 권호식 HLA alleles in patients administrated with Contrast media   TopicSem
17 조민아 All variants of CEMIP2 genes in ulcerative colitis patients  SysBiol
20 안세환 Haplogrouping performance evaluation  TopicSem
20 조원일 CPIC PGx Gene:Star allele calling  TopicSem
22 최선 MolTrans_Molecular Interaction Transformer for DTI prediction     J.Club
22 전예진 Integrating rare genetic variants into pharmacogenetic drug response predictions     J.Club
24 최선 toy project for drug discovery  TopicSem
24 윤미선 Pharmacogenomic Profile of Korean population using whole genome sequencing (Methods & Results of HLA)  TopicSem
24 부은경 SysBiol
27 배소정 Rare and low-frequency genetic variants in bacterial and viral disease  TopicSem
27 조민아 Prioritizing CD- or UC-specific variants among candidates  TopicSem
27 권호식 NGS-based HLA genotyping tools  MAInfo
29 부은경 Integrative analysis of drug response and clinical outcome in acute myeloid leukemia     J.Club
29 김나영 Harmonization and standardization of data for a pan-European cohort on SARS- CoV-2 pandemic     J.Club
31 유준기 Candidate variants of Infliximab induced neutropenia in IBD patients  TopicSem
31 임영균 Identifying Gene combination affecting Cancer patients Survival  TopicSem

2022-09:
01 부은경 Evaluation of association between genetic variants and thiopurine-induced leukopenia in inflammatory bowel disease  TopicSem
01 임영균 Association between IRF2BP1-rs60158447 and incidence of post ERCP pancreatitis.   TopicSem
03 김나영 CASIDE: A data model for interoperable cancer survivorship information based on FHIR     J.Club
03 정문경 Recognizing Emotions among Couples Managing Diabetes in Daily Life using Multimodal Real-World Smartwatch Data     J.Club
05 이시은 Information Retrieval and medical ontology NLP  TopicSem
05 전예진 CYP2C19 phenotype calling in Korean population(HBDS)  TopicSem
08 정문경   TopicSem
08 김나영 Composite CDE modeling in the domain of 5 representative clinical documents: Data-driven approach  TopicSem
08 윤미선 CLIP for Medical Image  MAInfo
08 윤미선 CLIP for Medical Image  MAInfo
10 ... 추석  J.Club
10 ... 추석  J.Club
12 ... 대체휴일  TopicSem
12 ... 대체휴일  TopicSem
15 조원일 inhouse _starallele_calling  TopicSem
15 안선주 PGwatch_Review and starallele  TopicSem
15 유준기 Review of recurrent event models  MAInfo
17 조원일 Genomewide pharmacogenetics of antidrug antibody response to bococizumab highlights key residues in HLA DRB1 and DQB1     J.Club
17 이시은 Deep learning-based NLP data pipeline for EHR-scanned document information extraction     J.Club
19 최선 Fall prediction  TopicSem
19 권호식 Candidate variations related with adverse effects of contrast media  TopicSem
22 안세환 Evaluate haplogrouping by star-allele  TopicSem
22 윤미선 Pharmacogenomic Profile of Korean population using whole genome sequencing_2  TopicSem
22 배소정 MIMIC-IV database  MAInfo
24 조민아 A Survey of Compound Heterozygous Variants in Pediatric Cancers and Structural Birth Defects     J.Club
24 부은경 Large-scale sequencing identifies multiple genes and rare variants associated with Crohn’s disease susceptibility     J.Club
26 배소정 Biological agent genome sequence analysis  TopicSem
26 조민아 Results of selecting pathogenic variants and comparing with clinical data in RP  TopicSem
26 전예진 type of pharmacogenomic evidence and limitation  SysBiol
29 유준기 Survival analysis of infliximab induced neutropenia in IBD patients  TopicSem
29 임영균 Identifying candidate variants of PEP in merged dataset with new PSM control  TopicSem

2022-08:
01 김나영 Semantic data integration of 5 representative Clinical Document items  TopicSem
01 안세환 Evaluate haplogroups by populations  TopicSem
01 조민아 Application of long-read sequencing to elucidate complex pharmacogenomic regions: a proof of principle  SysBiol
03 최선 낙상예측  MAInfo
04 조원일 analysis of chip and report data of showcase  TopicSem
04 권호식 Candidate copy number variations related with adverse effects of contrast media  TopicSem
04 이우승 Data of Signatures of copy number alterations from TCGA  MAInfo
06 배소정 A genome-wide association study in a large community-based cohort identifies multiple loci associated with susceptibility to bacterial and viral infections     J.Club
06 유준기 Rare genetic variability in human drug target genes modulates drug response and can guide precision medicine     J.Club
08 최선 Fall risk prediction  TopicSem
08 윤미선 Pharmacogenomic Profile of Korean population using whole genome sequencing_2  TopicSem
11 배소정 Biological agents study idea and data processing   TopicSem
11 이우승 SCV Splitting overlapped region between amplicons method to detect somatic copy number variation (CNV) with PCR-based targeted sequencing  TopicSem
11 권호식 Mutect2(Mitochondria mode)  MAInfo
13 권호식 Copy number variation is highly correlated with differential gene expression: a pan-cancer study     J.Club
13 최선 Integrative multiomics-histopathology analysis for breast cancer classification     J.Club
15 ... 광복절  TopicSem
15 ... 광복절  TopicSem
16 최선 RNA seq research  MAInfo
18 조민아 Results of Classification with patients using known retinitis pigmentosa genes  TopicSem
18 유준기 Variant filtering and Gene-wise analysis of Infliximab induced neutropenia in IBD patients  TopicSem
20 이우승 A pan cancer compendium of chromosomal instability     J.Club
20 윤미선 Development of an extensive workflow for comprehensive clinical pharmacogenomic profiling: lessons from a pilot study on 100 whole exome sequencing data     J.Club
22 ... GDA  TopicSem
22 ... GDA  TopicSem
25 ... GDA  TopicSem
25 ... GDA  TopicSem
25 최선 RNA seq research  MAInfo
27 전예진 Biobank Scale Pharmacogenomics Informs the Genetic Underpinnings of Simvastatin Use     J.Club
27 임영균 Improved pathogenicity prediction for rare human missense variants     J.Club
29 ... GDA  TopicSem
29 ... GDA  TopicSem

2022-07:
02 이시은 Automatically disambiguating medical acronyms with ontology-aware deep learning  J.Club
02 전예진 Combination of Genome-Wide Polymorphisms and CNVs of Pharmacogenes in Koreans     J.Club
04 안세환 Evaluate haplogrouping and K-means clustering  TopicSem
04 조원일 Starallele_calling 3_healthshowcase data  TopicSem
06 김나영 A Digital Health Program Targeting Physical Activity Among Adolescents With Overweight or Obesity: Open Trial  BioEMR
07 권호식 Candidate variants related with adverse effects of contrast media including Sex chromosomes  TopicSem
07 최선 대장암 선별검사연구  TopicSem
07 윤미선 Identifying interactions in omics data for clinical biomarker discovery using symbolic regression  MAInfo
07 윤미선 Star allele calling in CYP2D6  MAInfo
07 윤미선 Star allele calling in CYP2D6  MAInfo
09 임영균 Identification of discriminative gene-level and protein-level features associated with pathogenic gain-of-function and loss-of-function variants      J.Club
09 김나영 Developing an ETL tool for converting the PCORnet CDM into the OMOP CDM to facilitate the COVID-19 data integration     J.Club
11 윤미선 Star allele calling in CYP2D6 and HLA  TopicSem
11 조민아 Results of Classification with patients using known retinitis pigmentosa genes  TopicSem
14 이우승 Splitting overlapped region between amplicons method to detect somatic copy number variation (CNV) with PCR-based targeted sequencing  TopicSem
14 배소정 Biological agents : Study idea and data preprocessing  TopicSem
14 유준기 CIBERSORTx: Determining cell type abundance and expression from bulk RNA-seq data  MAInfo
16 정문경 Enabling Research and Clinical Use of Patient-Generated HealthData (the mindLAMP Platform): Digital Phenotyping Study     J.Club
16 조민아 Unbiased mosaic variant assessment in sperm: a cohort study to test predictability of transmission     J.Club
18 인턴 Statistical analysis of AKR1C family mutation that lowers cancer risk  TopicSem
18 인턴 Statistical analysis of AKR1C family mutation that lowers cancer risk  TopicSem
18 안세환 Adjusted Rand Index between haplogroups and populations   SysBiol
21 유준기 Variant wise analysis of infliximab induced neutropenia in IBD patients  TopicSem
21 임영균 Analysis of validation samples of Post-ERCP pancreatitis  TopicSem
21 배소정 Bioinformatics in vaccine design and virus detection  MAInfo
23 안세환 Dating genomic variants and shared ancestry in population scale sequencing data     J.Club
23 조원일 Pharmacogenetic genotype and phenotype frequencies in a large Danish population-based case-cohort sample     J.Club
25 부은경 Association of genetic variants in IL6 with thiopurine-induced leukopenia in patients with inflammatory bowel disease  TopicSem
25 전예진 220725_Active surveillance of drug-gene using RWD  TopicSem
27 정문경 Journal Review: Maintaining Outcomes of Internet-Delivered Cognitive-Behavioral Therapy for Depression: A Network Analysis of Follow-Up Effects  BioEMR
28 이시은 lstm  TopicSem
28 정문경 Design ideas for PGHD visualization and incentives  TopicSem
28 임영균 Immune checkpoint inhibitor therapy response data   MAInfo
30 이시은 Leveraging clinical data across healthcare institutions for continual learning of predictive risk models     J.Club
30 부은경 A global overview of genetically interpretable multimorbidities among common diseases in the UK Biobank  J.Club

2022-06:
02 김나영 Ontology classification methods of 731 Unique CDEs  TopicSem
02 안세환 Evaluate constructing haplogroup method  TopicSem
04 배소정 Loss of Bacitracin Resistance Due to a Large Genomic Deletion among Bacillus anthracis Strains     J.Club
04 최선 Multi-omics prediction of immune-related adverse events during checkpoint immunotherapy     J.Club
06 ... 현충일  TopicSem
06 ... 현충일  TopicSem
09 조원일 Starallele_calling 2_healthshowcase data  TopicSem
09 권호식 Candidate variants related with adverse effects of contrast media  TopicSem
11 부은경 Identification of genetic risk loci and prioritization of genes and pathways for myasthenia gravis: a genome-wide association study     J.Club
11 권호식 The frequency of the known mitochondrial variants associated with drug‑induced toxicity in a Korean population     J.Club
13 최선 대장암선별검사 연구     TopicSem
13 윤미선 Study design using WES of CKD  TopicSem
14 이우승 Prognostic significance of allele-specific loss of heterozygosity in triple-negative breast cancer  Seminar
16 부은경 Effect of IFX on the associations between genetic variants and thiopurine-induced leukopenia  TopicSem
16 이우승 Splitting overlapped region algorithm for detction of Copy number Variants in targeted amplicon sequencing data  TopicSem
16 최선 Reinforcement learning  MAInfo
18 안세환 Evaluation of population-level pharmacogenetic actionability in Alabama     J.Club
18 유준기 Combining SNP-to-gene linking strategies to identify disease genes and assess disease omnigenicity     J.Club
20 조민아 Workflow of Retinitis Pigmentosa patients WES data   TopicSem
20 유준기 Infliximab induced neutropenia in IBD patients - subgroups and graphs  TopicSem
20 안세환 Evaluate the haplogrouping method by DNA evolution pairwise distances  SysBiol
22 조원일 The Ensembl Variant Effect Predictor  BioEMR
23 임영균 Analysis of validation samples of Post-ERCP pancreatitis  TopicSem
23 배소정 Analysis of genome sequence associated with biological agents  TopicSem
23 이우승 Standard Preprocessing and Analysis of Single Cell Gene Expression Data  MAInfo
25 이우승 A general framework for identifying oligogenic combinations of rare variants in complex disorders     J.Club
25 윤미선 Building digital twins of the human immune system: toward a roadmap     J.Club
27 김나영 Standardization Procedure of Clinical Concepts  TopicSem
27 전예진 Active surveillance of drug-gene relationship using RWD  TopicSem
27 조민아 Euclidean distance-optimized data transformation for cluster analysis in biomedical data (EDOtrans)  SysBiol
29 정문경 Book Review: Regression methods in biostatistics (Ch1-4, 7, 10)  BioEMR
29 정문경 Book Review: Chapters from Regression methods in biostatistics  BioEMR
29 정문경 Book Review: Chapters from Regression methods in biostatistics  BioEMR
30 정문경 Effect of diet therapy in hemodialysis patients (wrap-up)  TopicSem
30 이시은 LSTM for gait recognition using OU-ISIR gait dataset  TopicSem
30 권호식 Association test for variants on X chromosome  MAInfo

2022-05:
02 정문경 Effect of diet therapy in hemodialysis patients   TopicSem
02 김나영 CDE reuse result of 5 representative clinical documents  TopicSem
04 김나영 SNOMED CT: A controlled coded clinical terminology for use in EHRs  BioEMR
05 ... 어린이날  TopicSem
05 ... 어린이날  TopicSem
07 최선 Pre-training graph neural networks for link prediction in biomedical networks     J.Club
07 윤미선 Clinical pharmacogenetic analysis in 5,001 individuals with diagnostic Exome Sequencing data     J.Club
09 안세환 Evaluation of haplogroups in 25 pharmacogenes  TopicSem
09 조원일 Starallele calling_1 -health showcase data  TopicSem
12 권호식 Comparison of the clinical information by genotypes of potential candidate variants  TopicSem
12 최선 Effect of renal function on nutritional screening index  TopicSem
12 최선 shap value  MAInfo
14 전예진 GWAS suggests that variation at the RCOR1 locus is associated with tinnitus in UK Biobank       J.Club
14 김나영 Defining health data elements under the HL7 development framework for metadata management     J.Club
16 윤미선 Pharmacogenomic Profile of Korean population using whole genome  TopicSem
16 조민아 Exploring WES data of Retinitis Pigmentosa patients  TopicSem
16 안세환 Summary of variants in 25 pharmacogenes  SysBiol
19 이우승 Prognostic significance of allele-specific loss of heterozygosity in triple-negative breast cancer   TopicSem
19 배소정 Analysis of genome sequence associated with biological agents  TopicSem
21 임영균 Pangenome-based genome inference allows efficient and accurate genotyping across a wide spectrum of variant classes     J.Club
21 정문경 A fusion decision system to identify and grade malnutrition in cancer patients: Machine learning reveals feasible workflow from representative real-world data     J.Club
23 유준기 Infliximab induced neutropenia in IBD patients - case reconstruction  TopicSem
23 부은경 Association of genetic variants in IL6 with thiopurine-induced leukopenia in patients with inflammatory bowel disease  TopicSem
23 조민아 JASPAR database: an open-access database of curated, non-redundant transcription factor (TF) binding profiles  SysBiol
24 이우승 Prognostic significance of allele-specific loss of heterozygosity in triple-negative breast cancer  Seminar
25 정문경 Statistical methods summary  BioEMR
26 정문경 Malnutrition Indicies: research purpose refinements & progess update  TopicSem
26 이시은 Time series analysis of Gait data   TopicSem
26 유준기 Neutropenia criteria in Infliximab-treated IBD patients  MAInfo
28 조원일 Comprehensive Allele Genotyping in Critical Pharmacogenes Reduces Residual Clinical Risk in Diverse Populations      J.Club
28 조민아 A systems genomics approach to uncover patient-specific pathogenic pathways and proteins in ulcerative colitis     J.Club
30 전예진 Clinical data preprocessing of asthma patients in UKBB  TopicSem
30 임영균 Identifying candidate variants of PEP in validaiton dataset  TopicSem

2022-04:
02 윤미선 Genetic associations of protein-coding variants in human disease     J.Club
02 최선 DeSIDE_DDI interpretable prediction of drug_drug interactions       J.Club
04 정문경 Effect of diet therapy in hemodialysis patients  TopicSem
04 이시은   TopicSem
05 부은경 Exploration of genotype-phenotype interactions and prevalence of genetic variants  SysBiol
07 안세환 Evaluation of haplogrouping results  TopicSem
07 조원일   TopicSem
07 유준기 All of Us: Genomic data browser  MAInfo
09 이시은 Developing a Clinical Prediction Rule for Gait Independence at Discharge in Patients with Stroke: A Decision-Tree Algorithm Analysis     J.Club
09 안세환 Pharmacogenomic landscape of Indian population using whole genomes     J.Club
11 부은경 Figures for association between genetic variants and TIL in IBD patients  TopicSem
11 이시은 Time Series Anomaly Detection with ECG5000  TopicSem
14 권호식 Candidate variants related with MTX delayed excretion and Subgroup analysis  TopicSem
14 최선 Difference in survival rate according to colorectal cancer screening test  TopicSem
14 임영균 MSK-MET, a cohort of over 25,000 patients with metastasis across 50 cancer types.   MAInfo
16 조민아 The complete sequence of a human genome      J.Club
16 조원일 Automated Pharmacogenomic Reports for Clinical Genome Sequencing     J.Club
18 윤미선 Summary of Healthcare Big Data Showcase Data  TopicSem
18 이우승 Prognostic significance of allele-specific loss of heterozygosity in triple-negative breast cancer  TopicSem
21 조민아 Summary of IBD study  TopicSem
21 유준기 Infliximab induced neutropenia in IBD patients  TopicSem
21 이우승 Curated variation benchmarks for challenging medically relevant autosomal genes  MAInfo
23 부은경 New insights into the genetic etiology of Alzheimer’s disease and related dementias     J.Club
23 권호식 Mitochondrial DNA variation across 56,434 individuals in gnomAD     J.Club
25 임영균 Genetic variants associated with post-ERCP pancreatitis (PEP)  TopicSem
25 전예진 The study of gene variants associated with neuropsychiatric events of Montelukast     TopicSem
25 조민아 The complete sequence of a human genome (github)  SysBiol
27 정문경 Statistical Errors in the Medical Literature (by Frank Harrell)  BioEMR
28 이시은 Health big data analysis using Hira public data  TopicSem
28 부은경 Summary of evaluation of association between TIL and genetic risk factors in IBD  TopicSem
28 권호식 Mitochondrial DNA variants in gnomAD Browser  MAInfo
30 유준기 The individual and global impact of copy-number variants on complex human traits     J.Club
30 이우승 Interpretable prioritization of splice variants in diagnostic next-generation sequencing     J.Club

2022-03:
03 조민아 The age of onset and disease severity in IBD susceptible candidates   TopicSem
03 유준기 Genetic variants associated with Infliximab response in IBD patients  TopicSem
03 임영균 Project Score / Opentargets review and data curation   MAInfo
05 이시은 ECG‑based machine‑learning algorithms for heartbeat classification     J.Club
05 안세환 Massively parallel characterization of CYP2C9 variant enzyme activity and abundance     J.Club
07 임영균 Genetic variants associated with post-ERCP pancreatitis (PEP)  TopicSem
07 부은경 Association between genetic variants and thiopurine-induced leukopenia in IBD patients  TopicSem
10 이시은 ECG anomaly detection using LSTM  TopicSem
10 정문경 Effect of customized diet therapy in hemodialysis patients   TopicSem
10 이우승 Comparison of LOH Variant Calling Algorithms  MAInfo
10 이우승 Comparison of LOH Variant Calling Algorithms  MAInfo
10 이우승 Comparison of LOH Variant Calling Algorithms  MAInfo
12 유준기 Analysis of rare genetic variation underlying cardiometabolic diseases and traits among 200,000 individuals in the UK Biobank     J.Club
12 권호식 Changes in Plasma Amyloid and Tau in a Longitudinal Study of Normal Aging, Mild Cognitive Impairment, and Alzheimer’s Disease     J.Club
14 최선 대장암 선별검사(분변잠혈검사와 대장내시경)의 효과 비교   TopicSem
14 안세환 Association between haplogroups and star-alleles in 25 pharmacogenes  TopicSem
17 조원일 penicillin allergy related variants wise analysis in UKBB [resampling]  TopicSem
17 김나영 Creation of Admission, Discharge notes using an existing CDE  TopicSem
17 권호식 [Review] Repeated Measures Designs and Analysis of Longitudinal Data  MAInfo
19 이우승 Intergrative single cell analysis of allele specific copy number alterations and chromatin accessibility in cancer     J.Club
19 임영균 A pan-cancer landscape of somatic mutations in non-unique regions of the human genome     J.Club
21 권호식 Candidate variants related with MTX-induced delayed excretion  TopicSem
21 윤미선 Proposed model : Universal MixUp for Domain Generalization in CXR  TopicSem
24 이우승 The Prognostic Potential of Allele Specific Loss of Heterozygosity in Triple Negative Breast Cancer  TopicSem
24 조민아 Allele frequency of prss16 variant in ukbb ibd patients and summary of the association study in korean ibd patients  TopicSem
24 최선 SAS_statistic  MAInfo
26 김나영 Common Data Elements for Meaningful Stroke Documentation in Routine Care and Clinical Research: Retrospective Data Analysis     J.Club
26 정문경 Design issues in personalized nutrition advice systems     J.Club
28 유준기 Variant-wise analysis of Infliximab response in IBD patients  TopicSem
28 임영균   TopicSem
29 조민아 Comparing coverage of genotyping of previous study  SysBiol
31 부은경   TopicSem
31 김나영 CMDO(Clinical MetaData Ontology) for CDE classification  TopicSem
31 윤미선 Issues in Identification of pharmacogenetic variants from WGS in Health Showcase  MAInfo

2022-02:
03 윤미선 Domain adaptation for Medical images  TopicSem
03 서명의 TopicSem
05 조원일 Actionable pharmacogenetic variants in Hong Kong Chinese exome sequencing data and projected prescription impact in the Hong Kong population.pdf     J.Club
05 김나영 PGHD management and quality challenges in remote patient monitoring     J.Club
07 조민아 Association study in Korean inflammatory bowel disease patients  TopicSem
07 유준기 Infliximab induced ADR in IBD patients  TopicSem
10 임영균 TopicSem
10 부은경 Evaluation of association between genetic variants and leukopenia in IBD patients using survival analysis  TopicSem
10 최선 SAS command for HIRA data analysis  MAInfo
12 서명의 J.Club
12 윤미선 Pharmacogenomic analysis of a genetically distinct Indigenous population     J.Club
14 이시은   TopicSem
14 정문경 Effect of customized diet therapy in hemodialysis patients (Data Cleaning)  TopicSem
17 김나영 Master Table and reuse rate of 611 Unique CDEs  TopicSem
17 안세환 Haplogroups of 25 pharmacogenes  TopicSem
19 임영균 The Cancer Surfaceome Atlas integrates genomic, functional and drug response data to identify actionable targets     J.Club
19 부은경 Whole-genome sequencing in diverse subjectsidentifies genetic correlates of leukocyte traits:The NHLBI TOPMed program     J.Club
21 조원일 Penicillin allergy related variants wise analysis in UKBB   TopicSem
21 권호식 Candidate variants related with MTX-induced nephrotoxicity or delayed excretion  TopicSem
22 조민아 Extracting disease age of onset in UKBB  SysBiol
24 최선 Image classification of herbs  TopicSem
24 윤미선   TopicSem
24 유준기 Study design - Infliximab response in IBD patients  MAInfo
26 정문경 Hybrid Ubiquitous Coaching With a Novel Combination of Mobile and Holographic Conversational Agents Targeting Adherence to Home Exercises: Four Design and Evaluation Studies     J.Club
26 조민아 Germline burden of rare damaging variants negatively affects human healthspan and lifespan     J.Club
28 이우승 The Prognostic Potential of Allele Specific Loss of Heterozygosity in TNBC  TopicSem
28 서명의 TopicSem

2022-01:
01 ... 신정  J.Club
01 ... 신정  J.Club
03 조민아 The results of association study in IBD at FDR 5%  TopicSem
03 유준기 Anti TNF therapy induced ADR   TopicSem
06 임영균   TopicSem
06 부은경 Association of genetic variants with thiopurine-induced leukopenia in IBD patients  TopicSem
06 유준기 Accessing JGA (Japanese Genotype-Phenotype Archive) data  MAInfo
08 홍진희 A simple CNN for prediction of enhancer-promoter interactions with DNA seq data     J.Club
08 안세환 Phenotype prediction and characterization of 25 pharmacogenes in Thais from whole genome sequencing for clinical implementation     J.Club
10 최선 반려동물 질병진단  TopicSem
10 정문경   TopicSem
11 조민아 Genozip: a universal extensible genomic data compressor  SysBiol
13 김나영 The number of reduced CDEs achieved by integrating the information from multiple hospitals  TopicSem
13 안세환 Enrichment analysis of TPMT haplogroups  TopicSem
15 조민아 An open approach to systematically prioritize causal variants and genes at all published human GWAS trait-associated loci      J.Club
15 권호식 Genetic Background of Mesalamine-induced Fever and Diarrhea in Japanese Patients with Inflammatory Bowel Disease     J.Club
17 정문경 Malnutrition Indices (progress)  TopicSem
17 조원일 The NGS study of penicillin allergy history in UKBB[Topic selection]   TopicSem
18 부은경 Case study of thiopurine intolerance in IBD   SysBiol
20 이시은 ECG Labeling and Anomaly Detection  TopicSem
20 권호식 Candidate variants related with MTX-induced elevations in creatinine or MTX plasma concentrations  TopicSem
20 이우승 Mutational analysis of triple-negative breast cancer using targeted kinome sequencing  MAInfo
22 유준기 Exome variant discrepancies due to reference-genome differences     J.Club
22 이우승 The context-specific role of germline pathogenicity in tumorigenesis     J.Club
24 인턴 Pharmacogenomics and individualized therapy through VCF analysis     TopicSem
24 인턴   TopicSem
27 이우승 The Prognostic Potential of Allele Specific Loss of Heterozygosity  TopicSem
27 홍진희 Further study of ibd gwas by using UKBB  TopicSem
27 권호식 Human CNV and complex genetic disease  MAInfo
29 이시은 Automatic electrocardiogram detection and classification using bidirectional long short-term memory network improved by Bayesian optimization     J.Club
29 최선 Multi-omic machine learning predictor of breast cancer therapy response     J.Club
31 ... 설명절  TopicSem
31 ... 설명절  TopicSem

2021-12:
01 김나영 Digital medicine and Interoperability  BioEMR
02 윤미선 Anonymization and Deanonymization with CXR Identity Transformers  TopicSem
02 이우승 SCV:Split bed algorithm to detect gene-wide Copy number Variant   TopicSem
04 김나영 Mapping the Korean National Health Checkup Questionnaire to Standard Terminologies     J.Club
04 임영균 Integrating molecular profiles into clinical frameworks through the Molecular Oncology Almanac to prospectively guide precision oncology      J.Club
06 홍진희 Identification of genetic trait in IBD by using UKBB  TopicSem
06 서명의 Ampliseq custome panel for analyze drug response and sequencing results of NUDT15 and TPMT gene  TopicSem
07 조민아 The UKBB clinical data of results in UC patients group  SysBiol
09 조민아 The results of variant-wise analysis at FDR 5%  TopicSem
09 부은경 Comparison of thiopurine-induced leukopenia incidence among genetic subgroups in IBD patients  TopicSem
09 이우승 Comparison of CNV Detection tool Performance between Large and Small panel  MAInfo
11 정문경 Combined prognostic value of malnutrition using GLIM criteria and renal insufficiency in elderly heart failure     J.Club
11 조원일 Genome-wide Study Identifies Association between HLA-B*55:01 and Self-Reported Penicillin Allergy     J.Club
13 유준기 Rare variant analysis in MS patients  TopicSem
13 임영균   TopicSem
14 부은경 Study ideas for analyzing recurrent event data and correcting potential bias  SysBiol
16 이시은 Gait Signal Data Processing  TopicSem
16 정문경 Malnutrition Indices: literature review and study plan  TopicSem
16 권호식 Useful functions for preprocessing clinical data in R  MAInfo
18 서명의 High antibiotic resistance of Helicobacter pylori and its associated novel gene mutations among the mongolian population     J.Club
18 부은경 A polygenic-score-based approach for identification of gene-drug interactions stratifying breast cancer risk     J.Club
20 김나영 Heterogeneous data type managing in Admission Note integrative model  TopicSem
20 안세환 TPMT haplogroups enrichment analysis  TopicSem
23 조원일 The gwas study of penicillin allergy history in UKBB[topic & data preprocessing]  TopicSem
23 최선 Clustering for Korean body shape data  TopicSem
23 최선 Plan for HIRA big data analysis  MAInfo
25 ... 성탄절  J.Club
25 ... 성탄절  J.Club
27 윤미선 Anomaly Detection Using CNN based Autoencoder combined with Kernel Density Estimation(KDE)  TopicSem
27 이우승 SCV: Spliting bed algorithm to detect gene-wide Copy number Variant   TopicSem
28 안세환 TPMT star-alleles in high-coverage T1GP  SysBiol
30 홍진희 phenotype definition of IBD in ukbb  TopicSem
30 서명의   TopicSem
30 윤미선 Anomaly Detection for Medical Images Using Self-Supervised and Translation-Consistent Features  MAInfo

2021-11:
01 윤미선 Segmentation of components for Image preprocessing  TopicSem
01 이우승 Prognostic Potential of Loss of Heterozygosity in Triple Negative Breast Cancer  TopicSem
02 부은경 Analysis of rare and ultra-rare variants in gene based tests  SysBiol
04 홍진희 Revised candidate extract workflow by using UKBB dataset  TopicSem
04 서명의 Ampliseq panel for variants associated with antibiotics resistance in H.pylori  TopicSem
06 조원일 Validation of lipid-related therapeutic targets for coronary heart disease prevention using human genetics      J.Club
06 안세환 Population-scale predictions of DPD and TPMT phenotypes using a quantitative pharmaacogene-specific ensemble classifier     J.Club
08 ... GDA  TopicSem
08 ... GDA  TopicSem
11 ... GDA  TopicSem
11 ... GDA  TopicSem
13 홍진희 Components of genetic associations across 2,138 phenotype in the UK Biobank highlight adipocyte biology     J.Club
13 이시은 Research on intelligent medical big data system based on Hadoop and blockchain     J.Club
15 조민아 The results of Gene-wise association study in IBD discovery and replication  TopicSem
15 유준기 Rare variant analysis in Multiple Sclerosis patients   TopicSem
18 정문경 만성콩팥병 스마트관리 연구개발사업 현황  TopicSem
18 부은경 Estimation of association between genetic variants and thiopurine-induced leukopenia  TopicSem
20 이우승 Allele-specific genomic data elucidate the role of somatic gain and copy-number neutral loss of heterozygosity in cancer     J.Club
20 최선 MOGONET  J.Club
22 김나영 Ideal Model of Admission Note to manage semantics  TopicSem
22 임영균 Polymorphism affecting Tacrolimus flat peak  TopicSem
23 안세환 Comparison of phasing strategies for whole human genomes  SysBiol
24 정문경 malnutrition in UKBB   BioEMR
25 이시은 GDF and Time Series Data  TopicSem
25 안세환 Phylogenetic TPMT haplogroups  TopicSem
25 유준기 Variant calling from transcriptome data   MAInfo
27 유준기 Calibrated rare variant genetic risk scores for complex disease prediction using large exome sequence repositories     J.Club
27 윤미선 Semi-supervised Contrastive Learning for Label-efficient Medical Image Segmentation     J.Club
29 조원일 The gwas study of penicillin allergy in UKBB[Topic selection]   TopicSem
29 최선 Automatic Diagnosis of Scoliosis  TopicSem

2021-10:
02 최선 The measurement of Cobb angle based on spine X ray     J.Club
02 임영균 Rare variant contribution to human disease in 281,104 UK Biobank exomes     J.Club
04 ... 대체공휴일  TopicSem
04 ... 대체공휴일  TopicSem
05 조원일 genetic correlation  SysBiol
07 서명의 NGS platform for Helicobacter pylori ampliseq panel  TopicSem
07 조민아 The results of association study in IBD discovery and replication  TopicSem
07 임영균 Cancer register in UKB  MAInfo
09 ... 한글날  J.Club
09 ... 한글날  J.Club
11 ... 대체공휴일  TopicSem
11 ... 대체공휴일  TopicSem
12 안세환 Segmented haplotype estimation and imputation tools (SHAPEIT4)  SysBiol
12 안세환 Segmented haplotype estimation and imputation tools (SHAPEIT4)  SysBiol
14 유준기 Rare variant analysis incorporating functional annotations  TopicSem
14 임영균 Case reconstruction by candidate variants for PEP patients  TopicSem
14 이우승 Aggregate Trend of LOH by eQTL method  MAInfo
16 윤미선 A RELATIONAL-LEARNING PERSPECTIVE TO MULTI-LABEL CHEST X-RAY CLASSIFICATION      J.Club
16 김나영 Pragmatic MDR: a metadata repository with bottom up standardization of medical metadata through reuse     J.Club
18 김나영 CHMR curation tool improvement ideas  TopicSem
18 이시은 Ontology and Heterogeneous Lifelong Mining  TopicSem
19 윤미선 A Benchmark Dataset for Automatic Segmentation and Labeling of Individual Ribs on Chest X-rays  SysBiol
20 정문경 Google AppSheet  BioEMR
20 정문경 Google AppSheet  BioEMR
20 정문경 Google AppSheet  BioEMR
21 정문경 만성콩팥병 맞춤식이 연구 프로세스  TopicSem
21 부은경 Evaluation of association between genetic variants and TIL in 3 IBD datasets  TopicSem
21 권호식 Sequencing and Imputation  MAInfo
23 조민아 Clinical evolution, genetic landscape and trajectories of clonal hematopoiesis in SAMD9/SAMD9L syndromes     J.Club
23 서명의 Position effects at the FGF8 locus are associated with femoral hypoplasia     J.Club
25 안세환 Phylogenetic clustering results of T1GP  TopicSem
25 조원일 The relationship between Type 2 Diabetes patients & polyneuropathy(DPN) in UKBB [sampling]  TopicSem
26 조민아 Liftover using r package, rtracklayer  SysBiol
27 김나영 SMART Markers: Framework for Capturing Patient Generated Digital Endpoints  BioEMR
28 권호식 Adverse effects of Contrast Media  TopicSem
28 최선 Spine Segmentation for Automatic Diagnosis of Scoliosis     TopicSem
28 최선 Morphological Filtering & segmentation metrics  MAInfo
30 정문경 A simulation-based evaluation of machine learning models for clinical decision support: application and analysis using hospital readmission     J.Club
30 부은경 Polygenic basis and biomedical consequences of telomere length variation     J.Club

2021-09:
02 서명의 Comparison with AML H. pylori antibiotic resistance NGS panel  TopicSem
02 조민아 The results of association study in IBD discovery and replication  TopicSem
02 서명의 Comparison with AML H. pylori antibiotic resistance NGS panel  TopicSem
02 조민아 The results of association study in IBD discovery and replication  TopicSem
04 조원일 Gastroesophageal reflux GWAS identifies risk loci that also associate with subsequent severe esophageal diseases     J.Club
04 이시은 Deep-learning-based automated terminology mapping in OMOP-CDM      J.Club
06 유준기 Autoimmune disease single tissue eQTL analysis in UK Biobank  TopicSem
06 임영균 Polymorphism affecting Tacrolimus flat peak  TopicSem
08 정문경 CKD cohort in UKBB : CKD diagnosis  BioEMR
09 부은경 Association between genetic variants and thiopurine-induced leukopenia in IBD patients  TopicSem
09 이시은 Analysis of brain cognitive function using fNIRS  TopicSem
09 최선 Research idea challenge using cancer big data  MAInfo
11 홍진희 scRNA-seq technologies and related computational data analysis  J.Club
11 조동영 Prioritization of candidate causal genes for asthma in susceptibility loci derived from UK Biobank     J.Club
13 정문경 Developing Digital Literacy Instrument for IBD Care Mobile App  TopicSem
13 김나영 Numbers of DEs extracted from five clinical documents  TopicSem
15 김나영 HL7 FHIR standard-based resource modeling  BioEMR
15 최선 Public Cancer Bigdata  MAInfo
16 안세환 Results of matching Health Showcase data with T1GP haplogroups  TopicSem
16 조원일 diabetes and polyneuropathy gwas study in UKBB  TopicSem
18 권호식 Copy number variation profiling in pharmacogenes using panel-based exome resequencing and correlation to human liver expression     J.Club
18 이우승 Synthetic lethality mediated precision oncology via the tumor transcriptome     J.Club
20 ... 추석  TopicSem
20 ... 추석  TopicSem
23 권호식 Association between Traits in UK Biobank and Potential variant related with Methotrexate-induced nephrotoxicity  TopicSem
23 최선 Pill_classification_service  TopicSem
24 최선 Cancer idea challenge_0924  MAInfo
25 유준기 Set based rare variant expression quantitative trait loci in blood and brain from Alzheimer Disease study participants     J.Club
25 안세환 High coverage whole genome sequencing of the expanded 1000 Genomes Project cohort including 602 trios     J.Club
27 윤미선 Study Idea using Cancer Big Data   TopicSem
27 이우승 Prognostic Potential of Loss of Heterozygosity in Triple Negative Breast Cancer  TopicSem
28 부은경 Comparison of TIL incidence rate in combined IBD dataset  SysBiol
29 이시은 BIg Query Architecture  BioEMR
30 홍진희 Genetic association of ibd in 20K WES ukbiobank and classification of ibd  TopicSem
30 조동영   TopicSem
30 유준기 Comparing Rare Variant Association Tests  MAInfo

2021-08:
02 유준기 Comparative analysis integrating UK Biobank and eQTL data  TopicSem
02 임영균 Polymorphism affecting Tacrolimus flat peak  TopicSem
02 임영균 Molecular Features for subgrouping cancer patients혻  MAInfo
03 조민아 The CCGWAS R package : a tool for case-case association testing of two different disorders based on their respective case-control GWAS results  SysBiol
04 김형준 Digital signature and blockchain  BioEMR
05 부은경 Genetic variants that increase susceptibility to thiopurine-induced leukopenia in IBD patients  TopicSem
05 이시은 Lung Segmentation of Health BigData Showcase images using U-Net  TopicSem
07 김나영 Towards achieving semantic interoperability of clinical study data with FHIR     J.Club
07 임영균 Pathogenic missense protein variants affect different functional pathways and proteomic features than healthy population variants     J.Club
09 김형준 Decentralized ID and Zero-Knowledge proof  TopicSem
09 정문경 Ideation of Meal Recommender for CKD patients  TopicSem
09 이우승 AlphaFold : Highly Accurate Protein Structure Prediction  MAInfo
10 부은경 Survival Analysis Using Frailty Models  SysBiol
11 정문경 Exploring CKD cohort in UKBB: Social factors  BioEMR
12 김나영 DE review on DNet and Avatar Beans  TopicSem
12 김주연 Replicating Parkinsons disease genetic analysis with UK Biobank  TopicSem
13 Intern (heeseung) parsing HISAT2 result to sql file format   Seminar
13 Intern (heeseung) Web structure of Healthcare Showcase demo version  Seminar
14 윤미선 Encoding CT Anatomy Knowledge for Unpaired Chest X-ray Image Decomposition     J.Club
14 서명의 Comparison of culture with antibiogram to NGS using bacterial isolates and formalin fixed paraffin embedded gastric biopsies     J.Club
16 ...   TopicSem
16 ...   TopicSem
17 조원일 genetic correlations of polygenic disease traits  SysBiol
18 김나영 Merging two ontologies_MELLO and PACO  BioEMR
19 안세환 Hierarchical clustering of TPMT haplgroups  TopicSem
19 조원일 the relationship between diabetes and polyneuropathy in UKBB  TopicSem
21 김주연 Utilising large electronic medical record datasets to identify novel drug-gene interactions for commonly used drugs     J.Club
21 정문경 Development of a Spanish food exchange list: application of statistical criteria to a rationale procedure     J.Club
23 권호식 Identification of potential variants related with Methotrexate-induced nephrotoxicity  TopicSem
23 최선 Pill classification  TopicSem
24 안세환 TPMT star-alleles and haplogroups of Health Showcase data  SysBiol
26 윤미선 Image generation of chest x-ray  TopicSem
26 이우승 Prognostic Potential of Loss of Heterozygosity in TNBC  TopicSem
28 조민아 The molecular basis, genetic control and pleiotropic effects of local gene co-expression     J.Club
28 부은경 Whole-exome imputation within UK Biobank powers rare coding variant association and fine-mapping analyses     J.Club
30 홍진희 gene variants association with ibd in ukbb  TopicSem
30 조동영 Improving Genomic Discovery with Machine Learning Based Phenotyping  TopicSem
30 권호식 Genebass  MAInfo

2021-07:
01 ... TopicSem
01 정문경 Ideation of Meal Recommender for HD patients  TopicSem
03 조민아 A framework to decipher the genetic architecture of combinations of complex diseases: Applications in cardiovascular medicine     J.Club
03 이시은 A Transparent and Privacy-Preserving Healthcare Platform With Novel Smart Contract for Smart Cities     J.Club
05 최선 Review: Multi-omics approaches to disease     MAInfo
05 김형준 Healthavatar API and data granularity  TopicSem
05 김나영 5 intragrated clinical documents and KNet issues  TopicSem
06 안세환 Querying against cell viability data(PRISM) in CMap LINCS website  SysBiol
07 김나영 Transformation rules to import MELLO on Protege using Cellfie plugin  BioEMR
08 김주연 Parkinson disease genetic analysis with UK Biobank  TopicSem
08 안세환 Compare star-alleles and haplogroups in TPMT  TopicSem
08 김형준 HAP blockchain  Seminar
10 홍진희 Estimation of Genetic Correlation via Linkage Disequilibrium Score Regression and Genomic Restricted Maximum Likelihood     J.Club
10 조동영 Genome-wide study identifies association between HLA-B*55:01 and penicillin allergy     J.Club
12 Intern cGDM Schema Design of HLA data  TopicSem
12 Intern Storing and analyzing a data on a blockchain  TopicSem
12 Intern Determining what makes SARS-CoV-2 B.1.617.2 variant highly contagious  TopicSem
12 윤미선 A Nextflow Genome-Wide Association Study Pipeline  MAInfo
12 윤미선 A Nextflow Genome-Wide Association Study Pipeline  MAInfo
14 이시은 Introduction to MIMIC dataset  BioEMR
15 안선주   TopicSem
15 조원일 .The relationship between Diabetes patients prescribed DPP-4 inhibitor and pancreatitis in UKbiobank      TopicSem
17 유준기 Association between major depressive disorder and multiple disease outcomes: a phenome-wide Mendelian randomisation study in the UK Biobank     J.Club
17 권호식 Systematic single-variant and gene-based association testing of 3,700 phenotypes in 281,850 UK Biobank exomes     J.Club
19 권호식 Interpretation and literature review for the results of HD-MTX induced nephrotoxicity analysis  TopicSem
19 최선 Time series analysis of renal disease patient records  TopicSem
19 최선 Traces_Python library for unevenly-spaced time series analysis  MAInfo
20 윤미선 Group-based pharmacogenetic prediction  SysBiol
21 조원일 Individual patients analysis(UKBB database)   BioEMR
22 윤미선 Class Activation Map in Chest X-ray  TopicSem
22 이우승 Prognostic Potential of Loss of Heterozygosity in Triple Negative Breast Cancer  TopicSem
24 김형준 Combining Ontologies and Open Standards to Derive a Middle Layer Information Model for Interoperability of Personal and Electronic Health Records     J.Club
24 안세환 Haplotype-resolved diverse human genomes and integrated analysis of structural variation     J.Club
26 홍진희 Gene associated with inflammatory bowel disease and further study  TopicSem
26 조동영 Storing Healthcare Big Data Showcase PGx data using cGDM  TopicSem
26 유준기 Combining UKB dataset with eQTL data  MAInfo
27 김주연 Comparing distribution of variants in PD genes among 1KGP3 populations  SysBiol
28 김주연 Evaluating candidate Parkinson disease genes with UK biobank  BioEMR
28 김주연 Evaluating candidate Parkinson disease genes with UK biobank  BioEMR
29 서명의 Scale down the target ampliseq panel of host whole exome plus H.pylori genes for clinical application  TopicSem
29 조민아 The results of association study in IBD and IBD2  TopicSem
31 최선 Medical Transformer: Gated Axial-Attention for Medical Image Segmentation     J.Club
31 이우승 The tumor therapy landscape of synthetic lethality     J.Club

2021-06:
01 윤미선 Stargazer genotyping  SysBiol
02 이시은 FHIR and blockchain  BioEMR
03 김주연 Genomic variant analysis and interpretation for Parkinson’s disease  TopicSem
03 유경훈   TopicSem
03 김주연 Genomic variant analysis and interpretation for Parkinson’s disease  TopicSem
03 유경훈   TopicSem
05 유준기 Transcript expression-aware annotation improves rare variant interpretation     J.Club
05 김형준 SMART Markers_ collecting patient-generated health data as a standardized property of health information technology     J.Club
07 안세환 Haplogroupswith hierarchical clustering  TopicSem
07 조원일 polygenic risk score (PRS) – Drug relationship : study design  TopicSem
08 김주연 Revised association between PGx haplotype frequency and drug use in the UKBB population  SysBiol
09 조원일 the model method of PRS scoring     BioEMR
09 조원일 the model method of PRS scoring   BioEMR
10 권호식 Adverse Effects of Contrast Media  TopicSem
10 최선 Gene network analysis using TCGA RNA-Seq  TopicSem
12 서명의 High-throughput reclassification of SCN5A variant     J.Club
12 부은경 Genome-wide survival study identifies a novel synaptic locus and polygenic score for cognitive progression in Parkinson’s disease     J.Club
14 김형준 Adoption of blockchain technology   Seminar
14 윤미선 Big Data in Healthcare and "Healthcare Big Data Showcase"  TopicSem
14 이우승 Systemic Discovery Prognostic Potential Loss of Heterozygosity IL9 Expression Analysis  TopicSem
15 조민아 Review: Benchmarking the Human Leukocyte Antigen Typing Performance of Three Assays and Seven Next-Generation Sequencing-Based Algorithms  SysBiol
16 김주연 Examining polypharmacy in the Korean elderly  BioEMR
17 홍진희 IBD GWAS in ukbb  TopicSem
17 조동영 HLA Typing using hisat-genotype  TopicSem
19 김주연 Exome-wide evaluation of rare coding variants using electronic health records identifies new gene-phenotype associations     J.Club
19 정문경 Genome-wide gene-diet interaction analysis in the UK Biobank identifies novel effects on Hemoglobin A1c     J.Club
21 서명의 Comparison of Helicobacter pylori ampliseq panel and DPO-PCR method   TopicSem
21 이시은 Lifelog Data Collection with Shoe Insole and Data Integration  TopicSem
21 이우승 GTEX eQTL data   MAInfo
23 김형준 Health systems with document- or data-element-level data handling  BioEMR
24 유준기 GWAS study design using UK Biobank  TopicSem
24 조민아 Association Study between CD and UC   TopicSem
26 조원일 Genome-wide association study of medication-use and associated disease in the UK Biobank     J.Club
26 김나영 One Step Away from Technology but One Step Towards Domain Experts-MDRBridge: A Template-Based ISO 11179-Compliant Metadata Processing Pipeline     J.Club
28 부은경 Association between genetic variants and Thiopurine-induced leukopenia in IBD patients  TopicSem
28 임영균 WES analysis of post-ERCP pancreatitis patients  TopicSem
28 권호식 Filtering out false positive variants  MAInfo
29 조원일 Cyrius: accurate CYP2D6 genotyping using whole-genome sequencing data  SysBiol
30 정문경 CKD cohort in UKBB  BioEMR

2021-05:
01 이시은 An automatic method for lung segmentation and reconstruction in chest X-ray using deep neural networks     J.Club
01 부은경 Genetics of 35 blood and urine biomarkers in the UK Biobank     J.Club
03 이우승 Systemic Discovery Prognostic Potential Loss of Heterozygosity  TopicSem
03 홍진희 IBD GWAS in ukbb   TopicSem
03 최선 cancer subtype classification and modeling by pathway attention and propagation  MAInfo
04 조동영 Pharmacogenomics Application and Challenges  SysBiol
04 조동영 Pharmacogenomics Application and Challenges  SysBiol
06 조동영 Genome Analysis Protocol using Rarepedia  TopicSem
06 서명의 Individual antibiotics resistance profiles for antibiotics used in H.pylori therapy  TopicSem
08 안세환 Genetic ancestry plays a central role in population pharmacogenomics     J.Club
08 최선 Genome-wide Modeling of Polygenic Risk Score in Colorectal Cancer Risk     J.Club
10 조민아 Association study in IBD patients with depression called by GATK4  TopicSem
10 유준기 Rarepedia analysis of an individual  TopicSem
10 윤미선 Generative Adversarial Nets and its Application in Biomedical Informatics  MAInfo
11 유경훈 Opportunities and challenges for the computational interpretation of rare variation in clinically important genes  SysBiol
12 김나영 Creation of eCRF questionnaire  BioEMR
12 임영균 Association IRF2BP1 gene and Pancreatitis  MAInfo
13 임영균 WES analysis of post-ERCP pancreatitis patients   TopicSem
13 부은경 Association between genetic variants and Thiopurine-induced adverse reactions in IBD patients  TopicSem
15 윤미선 Differential Gene Set Enrichment Analysis: a statistical approach to quantify the relative enrichment of two gene sets     J.Club
15 권호식 A comparison of tools for copy-number variation detection in germline whole exome and whole genome sequencing data     J.Club
17 ... GDA  TopicSem
17 ... GDA  TopicSem
20 이시은 Healthcare Network Services and PGHD DB Building  TopicSem
20 김형준 Implementation of HAP blockchain and selection of PHR validation mode in Agent apps  TopicSem
22 이우승 Exploiting loss of heterozygosity for allele-selective colorectal cancer chemotherapy     J.Club
22 유경훈 Genetic analyses identify widespread sex-differential participation bias     J.Club
24 ... GDA  TopicSem
24 ... GDA  TopicSem
27 ... GDA  TopicSem
27 ... GDA  TopicSem
29 조동영 Whole genome sequencing delineates regulatory and novel genic variants in childhood cardiomyopathy     J.Club
29 임영균 Evaluating the molecular diagnostic yield of joint genotyping–based approach for detecting rare germline pathogenic and putative loss-of-function variants  J.Club
31 정문경 Interactive Web for CKD Patients  TopicSem
31 김나영 KNet Screen Prototype and data display method  TopicSem

2021-04:
01 이우승 Systemic Discovery of Prognosis Potential in Loss of Heterozygosity  TopicSem
01 홍진희 IBD gwas in ukbb  TopicSem
01 이우승 LOH of Korean TNBC  MAInfo
01 이우승 CovCopCan : An efficient tool to detect Copy Number Variation from amplicon sequencing data in inherited diseases and cancel  xMutant
03 임영균 Genome Sequencing as an Alternative to Cytogenetic Analysis in Myeloid Cancers     J.Club
03 유경훈 Identifying loci with different allele frequencies among cases of eight psychiatric disorders using CC-GWAS     J.Club
05 조동영 Genome Analysis Protocol using Rarepedia  TopicSem
05 서명의 Helicobacter pylori panel validation result  TopicSem
08 조민아 Association study in IBD patients with depression called by GATK4  TopicSem
08 유준기 Rarepedia analysis of an individual  TopicSem
08 조민아 Review: Transfer learning enables prediction of CYP2D6 haplotype function  SysBiol
08 권호식 review : Contrast media  MAInfo
10 김나영 QL4MDR: a GraphQL query language for ISO 11179-based metadata repositories     J.Club
10 정문경 DIETOS: A dietary recommender system for chronic diseases monitoring and management     J.Club
12 임영균 WES analysis of post-ERCP pancreatitis patients   TopicSem
12 부은경 PGx of inflammatory bowel disease  TopicSem
13 부은경 A systematic comparison of pharmacogene star allele calling bioinformatics algorithms: a focus on CYP2D6 genotyping  SysBiol
14 김주연 Evaluating risk of problems from Beers Criteria medication combinations  BioEMR
15 이시은 PGHD file format transformation into GDF format     TopicSem
15 김형준 Implementation of HAP blockchain with Avatar app and account management  TopicSem
15 임영균 MSI analysis in Cancer.   MAInfo
17 서명의 Strong functional data for pathogenicity or neutrality classify BRCA2 DNA-binding-domain variants of uncertain significance     J.Club
17 조원일 Genetic variants associated with cardiometabolic abnormalities during treatment with selective serotonin reuptake inhibitors: a genome-wide association study     J.Club
19 정문경 Investigation on Digital Health Equity  TopicSem
19 김나영 Clinical Document Integration using metadata from CHMR  TopicSem
20 조원일 Review: Pharmacogenimics_lancet  SysBiol
20 조원일 Review: Pharmacogenimics_lancet  SysBiol
20 조원일 Review: pharmacogenomics_lancet  SysBiol
21 김형준 Distributed Ledger Technology(DLT) and blockchain  BioEMR
22 유경훈 Whole Exome Sequencing & PGx for Major Depression  TopicSem
22 안세환 Deleterious TPMT haplogroups in T1GP  TopicSem
22 이우승 Review of Prognosis Potential Loss of Heterozygosity in TNBC  MAInfo
24 홍진희 Analysis of error profiles in deep next generation sequencing data     J.Club
24 조민아 Cytokines mapping for tissue-specific expression, eQTLs and GWAS traits     J.Club
26 조원일 pg_watch_CPIP guideline_G6PD     TopicSem
26 권호식 Candidate variants related with Methotrexate-induced nephrotoxicity  TopicSem
26 유경훈 ATAV - a comprehensive platform for population-scale genomic analyses  xMutant
27 안세환 Calling star-alleles from NGS data  SysBiol
28 정문경 Investigation on Digital Literacy (for Healthcare)  BioEMR
29 최선 Image segmentation of chest X-ray  TopicSem
29 윤미선 Comparison of Machine learning and Deep learning in prediction of PGx variants  TopicSem
29 권호식 Adverse Effects of Contrast Media  MAInfo

2021-03:
01 ... 삼일절  TopicSem
01 ... 삼일절  TopicSem
04 안세환 Star-allele based phenotypes and haplogroups  TopicSem
04 권호식 Clinical characteristics according to the presence or absence of candidate variants in UK Biobank  TopicSem
04 이우승 OncoKB Annotator  MAInfo
04 이우승 Process of Register Sequence data in Public Repository  xMutant
06 홍진희 Imputing Amino acid polymorphisms in human leukocyte antigens     J.Club
06 조민아 The 1000IBD project: multi-omics data of 1000 inflammatory bowel disease patients; data release 1     J.Club
08 최선 Cohort analysis for the retinal detachment research using UKB  TopicSem
08 이우승 Korean TNBC Kinome data Analysis  TopicSem
11 홍진희   TopicSem
11 서명의 Deleterious variants identified in normal cohort and its metabolic enzyme activity distance from normal function CYP2C19  TopicSem
11 권호식 Charlson comorbidity index  MAInfo
13 부은경 Genome sequencing analysis identifies new loci associated with Lewy body dementia and provides insights into its genetic architecture     J.Club
13 안세환 Systems Pharmacogenomic Landscape of Drug Similarities from LINCS data: Drug Association Networks     J.Club
15 조민아 Results of matching depression data with IBD data by several folds   TopicSem
15 임영균 WES analysis of post-ERCP pancreatitis patients  TopicSem
15 권호식 Propensity score analysis and R packages  xMutant
18 부은경 Additional data for interpreting thiopurine intolerance in patients with IBD  TopicSem
18 김형준 Update process for HashSeq management in Avatar DB  TopicSem
20 권호식 Analysis of Drug Metabolizing Gene Panel in Osteosarcoma Patients Identifies Association Between Variants in SULT1E1, CYP2B6 and CYP4F8 and Methotrexate Levels and Toxicities     J.Club
20 최선 Learning Transferable Visual Models From Natural Language Supervision     J.Club
22 정문경 Meal Recommendation Method for CKD patients  TopicSem
22 유경훈 Effect of cytochrome CYP2C19 metabolizing status on antidepressant response and side effects  TopicSem
23 김주연 Parkinsons disease Genomic Analysis  Seminar
23 김형준 Health Avatar Project for Dialysis- and RehabilitationNet  Seminar
23 임영균 Synthetic Cancer Survival  Seminar
23 서명의 PGx of Host and Pathogen in Helicobacter Pylori Infection  Seminar
23 이우승 Loss of Heterozygosity  Seminar
23 유경훈 Whole Exome Sequencing & PGx for Major Depression  Seminar
23 안세환 Factor-specific Pattern Mining of Gene Expression  Seminar
23 최선 Automatic acupoint prescription model  Seminar
23 권호식 MTX-induced Nephrotoxicity in ALL  Seminar
23 정문경 Dietary Intervention using ChatBot for Chronically Ill  Seminar
23 부은경 PGx of Inflammatory Bowel Disease  Seminar
23 조민아 Whole Exome Sequencing for Inflammatory Bowel Disease  Seminar
25 안세환 Diplogroups and star-allele based phenotypes  TopicSem
25 권호식 Methotrexate induced renal toxicity  TopicSem
27 이우승 Machine Learning of Patient Characteristics to Predict Admission Outcomes in the Undiagnosed Diseases Network     J.Club
27 김형준 The HealthChain Blockchain for Electronic Health Records_Development Study     J.Club
29 최선 Cohort analysis for the retinal detachment research using UKB  TopicSem
29 윤미선 Common treatment, common variant: evolutionary prediction of functional pharmacogenomic variants  TopicSem
29 김형준 PHR backup in Healthavatar  Seminar

2021-02:
01 부은경 Comparison of clinical outcomes according to pharmacogenetic information   TopicSem
01 김형준 Transaction management of HAP with synchronous and asynchrous blockchain  TopicSem
04 유경훈 Genome-wide association studies of antidepressant response  TopicSem
04 안세환 Introduction of Hail  TopicSem
06 이우승 Comprehensive Analysis of Genetic Ancestry and ItsMolecular Correlates in Cancer     J.Club
06 정문경 Statistical Issues in Analyzing 24-Hour Dietary Recall and 24-Hour Urine Collection Data for Sodium and Potassium Intakes     J.Club
08 권호식 Clinical characteristics according to the presence or absence of candidate variant in UK Biobank  TopicSem
08 최선 Cohort analysis for the retinal detachment research using UKB  TopicSem
11 ... 설날 연휴  TopicSem
11 ... 설날 연휴  TopicSem
13 ... 설날 연휴  J.Club
13 ... 설날 연휴  J.Club
15 서명의 Metabolic activity of mutant CYP2C19 with two types of substrates  TopicSem
15 홍진희 update Fitbit lifelog  TopicSem
18 이우승 Korean TNBC Kinome Data Analysis  TopicSem
18 조민아 Quality control and association study in IBD patients  TopicSem
18 홍진희 ukbb genotype  SysBiol
18 홍진희 ukbb genotype  SysBiol
18 홍진희 ukbb genotype  SysBiol
20 김형준 Article Implement an International Interoperable PHR by FHIR—A Taiwan Innovative Application     J.Club
20 유경훈 The mutational constraint spectrum quantified from variation in 141,456 humans     J.Club
22 임영균 WES analysis of post-ERCP pancreatitis patients  TopicSem
22 부은경 Comparison of clinical outcomes according to pharmacogenetic information   TopicSem
25 김형준 Implementation of Healthavatar blockchain  TopicSem
25 유경훈 Comprehensive analysis to discover the genomic background of antidepressant drug response  TopicSem
25 임영균 metmap  MAInfo
27 최선 Insights into the genetic basis of retinal detachment     J.Club
27 서명의 De novo and bi-allelic pathogenic variants in NARS1 cause neurodevelopmental delay due to toxic gain-of-function and partial loss-of-function effects     J.Club

2021-01:
02 임영균 Comprehensive characterization of amino acid positions in protein structures reveals molecular effect of missense variants     J.Club
02 서명의 Genomic sequencing for newborn screening: results of the NC NEXUS project     J.Club
04 이우승 Korean TNBC Kinome Analysis  TopicSem
04 홍진희 plan of study design in ukbiobank  TopicSem
07 서명의 Variants associated with antibiotics in 23S ribosomal RNA gene of H.pylori  TopicSem
07 조민아 Association study of IBD patients  TopicSem
07 유경훈 Global distribution of CYP2C19 risk phenotypes affecting safety and effectiveness of medications  SysBiol
09 유경훈 Pharmacogenetic information in Swiss drug labels – a systematic analysis     J.Club
09 정문경 When Chatbots Meet Patients: One-Year Prospective Study of Conversations Between Patients With Breast Cancer and a Chatbot     J.Club
11 임영균 Polymorphism affecting Tacrolimus flat peak  TopicSem
11 부은경 Comparison of clinical outcomes according to pharmacogenetic information  TopicSem
14 김형준 Revision comments and response of Healthavatar blockchain  TopicSem
14 유경훈 Genome-wide association studies of antidepressant response  TopicSem
14 홍진희 manual of using GP dataset in ukbb  SysBiol
16 홍진희 HLA typing from RNA-Seq sequence reads     J.Club
16 안세환 A systematic comparison of pharmacogene star allele calling bioinformatics algorithm: a focus on CYP2D6 genotyping     J.Club
18 권호식 Candidate variant as a biomarker for MTX-Induced nephrotoxicity in UK Biobank  TopicSem
18 최선 Cohort design for the retinal detachment research using UKB  TopicSem
21 안세환 Functional or Deleterious variants in each haplogroup  TopicSem
21 이우승 Korean TNBC Kinome data Survival Analysis  TopicSem
23 부은경 Discovery of rare variants associated with blood pressure regulation through meta-analysis of 1.3 million individuals     J.Club
23 조민아 Exploring the genetic architecture of inflammatory bowel disease by whole-genome sequencing identifies association at ADCY7     J.Club
25 홍진희 Azathioprine side effects among IBD in UKBB  TopicSem
25 서명의 Known mutations in ribosomal binding site of rRNA genes of H.pylori  TopicSem
28 조민아 Association study in IBD patients after NOD2 conditioning  TopicSem
28 임영균 Variants comparison with two calling methods in tacrolimus samples  TopicSem
28 이우승 TNBC Survival Analysis   MAInfo
30 권호식 Real world scenarios in rare variant association analysis: the impact of imbalance and sample size on the power in silico     J.Club
30 임영균 e-MutPath: computational modeling reveals the functional landscape of genetic mutations rewiring interactome networks     J.Club

2020-12:
03 김형준 PHR backup storage based on IPFS  TopicSem
03 김주연 Evaluating PGx molecular phenotype or haplotype frequency association with drug exposure using UK Biobank  TopicSem
03 김형준 PHR backup storage based on IPFS  TopicSem
03 김주연 Evaluating PGx molecular phenotype or haplotype frequency association with drug exposure using UK Biobank  TopicSem
03 이우승 Korean Uveal Melanoma Exome Analysis Figure  MAInfo
03 김주연 Refining the clinical definition of clopidogrel adverse events  SysBiol
05 안세환 A Proteotranscriptomic-Based Computational Drug-Repositioning Method for Alzheimer’s Disease     J.Club
05 김지헌 Genome analysis and knowledge-driven variant interpretation with TGex     J.Club
07 유경훈 Genome-wide association studies of antidepressant response  TopicSem
07 권호식 Candidate variants related with HD-MTX Induced Toxicity in Pediatric ALL  TopicSem
07 안세환 Compare TPMT haplogroup clusterings  BioEMR
07 이우승 Triple Negative Breast Cancer TMB Analysis  xMutant
10 안세환 Discovering three-dimensional FSGPs  TopicSem
10 최선 Relation extraction from clinical articles  TopicSem
12 조민아 Imaging genomics discovery of a new risk variant for Alzheimer     J.Club
12 홍진희 Association between Busulfan Exposure and Outcome in Children Receiving Intravenous Busulfan before Hematologic Stem Cell Transplantation     J.Club
14 김지헌 RarePedia analysis of RP patients  TopicSem
14 이우승 Korean Uveal Melanoma Whole Exome Analysis  TopicSem
14 김주연 PhaCT: a novel approach for preemptive PGx testing and medication therapy optimization  BioEMR
17 홍진희 Upload information of Busulfan patient  TopicSem
17 서명의 Sequencing result of NUDT15 and TPMT gene in 150 leukemia patients by using next-generation sequencing panel  TopicSem
17 최선 Training Keras Models Using the Genetic Algorithm with PyGAD  MAInfo
17 조민아 PHASE: A program for reconstructing haplotypes from population data  SysBiol
19 권호식 Combining clinical and candidate gene data into a risk score for azathioprine-associated leukopenia in routine clinical practice     J.Club
19 김형준 Blockchain for Secure EHRs Sharing of Mobile Cloud based E health Systems     J.Club
21 조민아 Discovery variants associated with IBD(Inflammatory Bowel Disease)  TopicSem
21 임영균 Synthetic Association with ERCC6-rs2228528 in Pancreatic Cancer   TopicSem
24 부은경 Comparison of clinical outcomes between non-WT and WT in IBD  TopicSem
24 김형준 Data communication between XNet and Agent  TopicSem
24 임영균 Comparison deleteriousness between germline and somatic variants in cancer   MAInfo
26 최선 Comparison of laboratory threshold criteria in drug-induced liver injury detection algorithms for use in pharmacovigilance     J.Club
26 이우승 Advances in germline predisposition to acute leukaemias and myeloid neoplasms     J.Club
28 유경훈 Genome-wide association studies of antidepressant response  TopicSem
28 안세환 TPMT haplogroup construction  TopicSem
31 권호식 Candidate variant in UK Biobank  TopicSem
31 최선 Applying the ADR template for retinal detachment used in K-CDM to UKB  TopicSem

2020-11:
02 홍진희 Result if ukbb replicate study and lifelog data format  TopicSem
02 서명의 Measuring enzyme activity of mutant CYP2C19 by using mephenytoin  TopicSem
02 김주연 Selecting ancestry informative markers and random variants for synthetic association analysis  BioEMR
02 최선 Handling temporality of clinical events with application to Adverse Drug Event detection in Electronic Health Records: A scoping review  xMutant
05 조민아 Searching literature regarding candidate variants associated with EOAD(Early onset Alzheimer  TopicSem
05 임영균 Germline variants associated with prognosis and drug response in pancreatic cancer patients  TopicSem
05 조민아 Introduction of Taiwan biobank database  SysBiol
05 이우승 Recent LOH algorithm review  MAInfo
05 조민아 Introduction of Taiwan biobank database  SysBiol
07 최선 Detecting drug-drug interactions using artificial neural networks and classic graph similarity measures     J.Club
07 임영균 Phase and context shape the function of composite oncogenic mutations       J.Club
09 부은경 Variant-level explanation for gender difference in PD  TopicSem
09 김형준 Figures and tables of Healthavatar blockchain  TopicSem
12 김주연 Evaluating CPIC PGx variant associated ADE risks with UK Biobank  TopicSem
12 유경훈 PGx phenotype association with dose and side effects of ADs in 1TD patients.   TopicSem
12 부은경 FastTargetPred: a program enabling the fast prediction of putative protein targets for input chemical databases  SysBiol
14 유경훈 Drug Response Pharmacogenetics for 200,000 UK Biobank Participants     J.Club
14 이우승 Loss of heterozygosity of essential genes represents a widespread class of potential cancer vulnerabilities     J.Club
14 조민아 Review: Neutrophil-to-lymphocyte ratio in inflammatory bowel disease - as a new predictor of disease severity  SysBiol
16 안세환 FSGPs with LINCS L1000 data  TopicSem
16 권호식 Analysis of renal toxicity induced by MTX in Korean pediatric ALL and UKB  TopicSem
17 조민아 All variants of CEMIP2 genes in ulcerative colitis patients  SysBiol
17 조민아 All variants of CEMIP2 genes in ulcerative colitis patients  SysBiol
17 조민아 Downloading data using pyega3  SysBiol
17 조민아 Downloading data using pyega3  SysBiol
17 조민아 Downloading data using pyega3 in python  SysBiol
19 최선 Algorithm application for clinical information extraction  TopicSem
19 김지헌 Rarepedia analysis of healthy individuals  TopicSem
21 서명의 Germline and mosaic variants in PRKACA and PRKACB cause a multiple congenital malformation syndrome     J.Club
21 부은경 Evidence for secondary-variant genetic burden and non-random distribution across biological modules in a recessive ciliopathy     J.Club
23 이우승 CNV Benchmark Results with Validation data  TopicSem
23 홍진희 Genetic Biomarker of Busulfan induced Hepatotoxicity  TopicSem
23 김주연 Comparing CPIC star allele phenotype or genotype frequencies between the 1000 Genomes and UKBB population  BioEMR
26 서명의 Enzymatic activity of mutant CYP2C19 and variant impact prediction scores  TopicSem
26 조민아 Subsetting LOAD(Late-onset Alzheimer’s disease) from ADSP data and compared to EOAD(Early-onset Alzheimer’s disease) data  TopicSem
26 임영균 pancreatic cancer WES analysis  MAInfo
28 정문경 Designing for Health Chatbots     J.Club
28 김주연 Population structure and pharmacogenomic risk stratification in the United States     J.Club
30 임영균 DNA Damaging Repair (DDR) gene Enrichment and Synthetic Association in Pancreatic Cancer   TopicSem
30 부은경 Classification of IBD subjects into three types of drug metabolizers  TopicSem
9 이우승 Result of BRCA2 CNV qPCR Validation  xMutant

2020-10:
01 ... 추석  TopicSem
01 ... 추석  TopicSem
03 ... 개천절  J.Club
03 ... 개천절  J.Club
05 이우승 Korean TNBC Kinome Analysis   TopicSem
05 홍진희 vitD and inflammatory bowel disease association study in ukbb   TopicSem
08 서명의 Mutant CYP2C19 overexpression by using human cell system  TopicSem
08 조민아 Analysis EOAD using matched depression data and 1000 genome data as control  TopicSem
10 김주연 Polygenic architecture informs potential vulnerability to drug-induced liver injury     J.Club
10 조민아 PCSK5 mutation in a patient with the VACTERL association     J.Club
12 임영균 Identifying genetic variants that affect pancreatic cancer patients survival  TopicSem
12 부은경 Validation of PD-associated Variants Using UKBB data  TopicSem
12 김주연 Progress in star allele calling for UKBB  BioEMR
15 ... 개교기념일  TopicSem
15 ... 개교기념일  TopicSem
17 안세환 Drug-induced adverse events prediction with the LINCS L1000 data     J.Club
17 홍진희 Vitamin D and IBD: Mendelian randomization analyses in the Copenhagen studies and ukbb     J.Club
19 김형준 Healthavatar blockchain with added process of sending data by POST API  TopicSem
19 최선 chart review for kcdm analysis  TopicSem
22 유경훈 Comparative Analysis results of a subgroup filtered with 12-week Escitalopram dose   TopicSem
22 권호식 Analysis of renal toxicity induced by MTX based on fold Cr in Korean pediatric ALL and UKB  TopicSem
22 김주연 Primary care prescription drug use and related actionable drug-gene interactions in the Danish population  SysBiol
22 최선 Pytorch tutorial  MAInfo
24 부은경 Dynamic incorporation of multiple in silico functional annotations empowers rare variant association analysis of large whole-genome sequencing studies at scale     J.Club
24 김지헌 Precision medicine integrating whole-genome sequencing, comprehensive metabolomics, and advanced imaging     J.Club
26 안세환 Discovering cell- and drug-specific patterns with the LINCS L1000 data  TopicSem
26 김주연 Examining the impact of pharmacogenomics testing with UK Biobank and its use for ADR risk comparisons  TopicSem
26 안세환 Introduction of Phylip  BioEMR
29 김지헌 RarePedia analysis of healthy individuals  TopicSem
29 이우승 Triple Negative Breast Cancer Genome Analysis  TopicSem
29 임영균 Summary of Pancreatic cancer data analysis   MAInfo
31 권호식 A novel statistical method for interpreting the pathogenicity of rare variants     J.Club
31 김형준 Using HL7 FHIR to achieve interoperability in patient health record     J.Club

2020-09:
03 안세환 Enrichment Test of drug-specific genes  TopicSem
03 최선 Additional analysis for K-CDM research (2217 kb)  TopicSem
03 안세환 Enrichment Test of drug-specific genes  TopicSem
03 최선   TopicSem
05 김지헌 SWEDEGENE—a Swedish nation-wide DNA sample collection for pharmacogenomic studies of serious adverse drug reactions       J.Club
05 이우승 The repertoire of mutational signatures in human cancer     J.Club
07 홍진희 Candidate of SAG and UKBB  TopicSem
07 서명의 Known mutations in H.pylori genome associated with Amoxicillin resistance and Metronidazole resistance phenotype  TopicSem
07 최선 Chart review to confirm the results of CDM analysis  BioEMR
07 최선 Chart review to confirm the results of CDM analysis  BioEMR
10 김지헌 RarePedia analysis of healthy individuals  TopicSem
10 이우승 Korean Uveal Melanoma Exome Analysis  TopicSem
10 최선 propensity score matching  MAInfo
12 임영균 A cancer drug atlas enables synergistic targeting of independent drug vulnerabilities     J.Club
12 김형준 An Architecture and Management Platform for Blockchain-Based Personal Health Record Exchange: Development and Usability Study      J.Club
14 조민아 Association study using EOAD (Early Onset Alzheimer's Disease) data  TopicSem
14 임영균 Identifying genetic variants that affect pancreatic cancer patients’ survival  TopicSem
14 최선 Basic operation of Flask  xMutant
14 안세환 The PRISM drug repurposing dataset  BioEMR
17 부은경 Validation of PD associated variants using UKBB data  TopicSem
17 김형준 Process for PHR data in Healthavatar blockchain architecture  TopicSem
17 이우승 Triple Negative Breast Cancer Analysis  xMutant
17 임영균 Identifying genetic variant associated FOLFIRINOX regimen  MAInfo
19 정문경 Transparent sharing of digital health data: A call to action     J.Club
19 유경훈 Identification of Neuropsychiatric Copy Number Variants in a Health Care System Population     J.Club
21 김주연 Applying modified method of candidate SAG extraction  TopicSem
21 안세환 Discovering significant and interpretable patterns with LINCS L1000 data  TopicSem
21 김주연 Star allele calling for UKBB  BioEMR
24 유경훈 Comparative Analysis results of a subgroup filtered with 12-week Escitalopram dose   TopicSem
24 권호식 Candidates related with Methotrexate induced acute kidney injury  TopicSem
24 이우승 BLAST Result of UVM for Sanger Validation  MAInfo
26 최선 Scalable and accurate deep learning with electronic health records     J.Club
26 서명의 Biallelic mutations in SORD cause a common and potentially treatable hereditary neuropathy with implications for diabetes     J.Club
28 최선 K-CDM analysis_2020mfds  TopicSem
28 김지헌 RarePedia analysis of healthy individuals  TopicSem
28 권호식 review : Oligonucleotide microarray  xMutant

2020-08:
01 정문경 Interaction of DRD2/ANKK1 Taq1A Genotype with in-Store Retail Food Environment Exposures on Diet Quality in a Cohort of Quebec Adults       J.Club
01 서명의 De novo variants in SPOP cause two clinically distinct neurodevelopmental disorders     J.Club
03 최선   TopicSem
03 권호식 MTX and AKI in UK Biobank   TopicSem
06 안세환 Interpretation significant cell- and drug-specific FSGPs  TopicSem
06 김지헌 RarePedia analysis of helathy individuals  TopicSem
06 권호식 Sex chromosomes and genetic association studies   MAInfo
08 채정환 Genome-wide association study identifies 32 novel breast cancer susceptibility loci from overall and subtype-specific analyses     J.Club
08 부은경 High-definition likelihood inference of genetic correlations across human complex traits     J.Club
10 이우승 Korean Uveal Melanoma Analysis  TopicSem
10 홍진희 synthetic association & UK biobank study guidline  TopicSem
10 이우승 NGS CheckMate : Validating sample identity in NGS studies  xMutant
13 임영균 Pancreatic Cancer with New-onset Diabetes Mellitus  TopicSem
13 조민아 Association study using EOAD (Early Onset Alzheimer's Disease) data  TopicSem
13 임영균 Affecting FOLFIRINOX sensitivity(CAP grade) variants  MAInfo
15 ... 광복절  J.Club
15 ... 광복절  J.Club
17 ... 임시공휴일  TopicSem
17 ... 임시공휴일  TopicSem
20 서명의 CYP2C19 star allele for PPI treatment in Helicobacter pylori eradication therapy  TopicSem
20 부은경 Summary of Candidate PD-associated Variants and Plan for Validation  TopicSem
22 조민아 Germline variant burden in cancer genes correlates with age at diagnosis and somatic mutation burden     J.Club
22 안세환 Improving cell-specific drug connectivity mapping with collaborative filtering     J.Club
24 김형준 Facilitating traceability of PHR data by blockchain  TopicSem
24 윤선민   TopicSem
27 김효정 PGx CDS: modular implementation of CPIC guideline  TopicSem
27 김주연 Updates of process and criteria for candidate SAG extraction  TopicSem
27 이우승 CNV Validation Candidate Selection  MAInfo
29 홍진희 .6mp metabolite profiles provide a biochemical explanation for 6mp resistance in patients with inflammatory bowel disease     J.Club
29 권호식 A functional polymorphism in the ATP-Binding Cassette B1 transporter predicts pharmacologic response to combination of nortriptyline and morphine in neuropathic pain patients     J.Club
31 유경훈 Comparative Analysis results of a subgroup filtered with 12-week Escitalopram dose   TopicSem
31 권호식 Candidate variants related with HD-MTX Induced Toxicity in Pediatric ALL  TopicSem
31 김주연 Identifying populations likely to benefit from pharmacogenomic testing  SysBiol
31 김주연 Implementation of pharmacogenomics via a research biobank  BioEMR

2020-07:
02 최선 Drug side effects detection using K-CDM data for new scenarios  TopicSem
02 안세환 Interpretation FSGPs in activator group  TopicSem
02 최선 Drug side effects detection using K-CDM data for new scenarios  TopicSem
02 안세환 Interpretation FSGPs in activator group  TopicSem
04 권호식 Landscape of multi-nucleotide variants in 125,748 human exomes and 15,708 genomes     J.Club
04 이우승 Korean Genome Project: 1094 Korean personal genomes with clinical information     J.Club
04 최선 Sklearn.preprocessing package for preprocessing data   MAInfo
06 김지헌 RarePedia analysis of healthy individuals  TopicSem
06 유경훈 Comparative analysis of 12w Escitalopram/SSRI dose conditioning effects  TopicSem
06 안세환 Significant FSGPs estimating FDR  BioEMR
06 박유미 Genotype Data in UKBiobank  SysBiol
06 이우승 Somatic Mutation Filtering Result with Korea1KG  xMutant
09 권호식 Adverse Effects of Contrast Media   TopicSem
09 이우승 Uveal Melanoma Analysis  TopicSem
09 임영균 CAP grade analysis  MAInfo
11 윤선민 De novo variants in exomes of congenital heart disease patients identify risk genes and pathways     J.Club
11 김형준 Development of Comprehensive Personal Health Records Integrating Patient-Generated Health Data Directly From Samsung S-Health and Apple Health Apps     J.Club
13 홍진희 FSIP2/INSR bam&fasta level read check  TopicSem
13 임영균 Genetic polymorphism affecting FOLFIRINOX response in pancreatic cancer patients  TopicSem
13 김주연 The implementation of pharmacogenomics for older adults  SysBiol
15 이우승 UVM Copy Number Analysis   MAInfo
16 조민아 Replicating prior research using EOAD(Early Onset Alzheimer Disease) data  TopicSem
16 서명의 Mutations associated with Tetracycline and Levofloxacin resistance phenotype in H.pylori  TopicSem
18 최선 Comprehensive comparative effectiveness and safety of first-line antihypertensive drug classes: a systematic, multinational, large-scale analysis     J.Club
18 유경훈 Scalable generalized linear mixed model for region-based association tests in large biobanks and cohorts     J.Club
20 부은경 Analysis to explain difference in genetic burden between males and females in PD  TopicSem
20 김형준 Review of MyHealthData Platform and Interoperability  TopicSem
20 김주연 Properties of the imputed genotype data format BGEN  BioEMR
20 권호식 Error and Trouble shooting In TVC and GATK  xMutant
20 유경훈 Perturbation robustness analyses reveal parameters in variant interpretation pipelines  xMutant
23 한봄 CBZ-induced SCAR  TopicSem
23 윤선민   TopicSem
23 홍진희 synthetic association study  SysBiol
23 홍진희 synthetic association study  SysBiol
23 홍진희 synthetic association study  SysBiol
23 홍진희 synthetic association study  SysBiol
23 홍진희 synthetic association study  SysBiol
23 홍진희 synthetic association study  SysBiol
23 홍진희 synthetic association study  SysBiol
23 홍진희 synthetic association study  SysBiol
23 홍진희 synthetic association study  SysBiol
23 홍진희 synthetic association study  SysBiol
25 임영균 A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer     J.Club
25 김주연 Projected impact of pharmacogenomic testing on medications beyond antiplatelet therapy in percutaneous coronary intervention patients     J.Club
27 박유미 Haplogroup construction for CRIM1 and IL6  TopicSem
27 김효정 Clinical genome data model further discussion  TopicSem
27 조민아 Gene set enrichment analysis tools  SysBiol
30 김주연 Frequency of ADR genotypes in UK Biobank  TopicSem
30 유경훈 Comparative analysis of 12w Escitalopram/SSRI dose adjustment effects  TopicSem

2020-06:
01 권호식 Candidate variants related with HD-MTX Induced Toxicity in Pediatric ALL  TopicSem
01 유경훈 Genomic variant analysis using thiopurine target panel including 4 genes  TopicSem
01 안세환 Integrative web platform for analysis of LINCS data (iLINCS)  BioEMR
01 부은경 Additional analysis to identify candidate variants associated with PD  SysBiol
04 안세환 Discovering FSGPs using small molecules classified by Moa  TopicSem
04 김주연 Estimating occurrence of South Koreans with ADR-associated genotypes  TopicSem
04 이우승 Uveal Melanoma Analysis: Somatic Mutation   MAInfo
06 ... 현충일  J.Club
06 ... 현충일  J.Club
08 최선 Evaluation of LDL-C target achievement according to age after statin prescription  TopicSem
08 김지헌 Genomic variant analysis of healthy individuals   TopicSem
08 최선 Reflection of expert advice on K-CDM scenario_Psychiatry  BioEMR
08 유경훈 VEF: a variant filtering tool based on ensemble methods  xMutant
08 권호식 Difference in clinical information according to candidate variants in HD-MTX Study  xMutant
08 안세환 Mechanism of action lists in L1000 data  SysBiol
11 이우승 Analysis of Uveal Melanoma Genome  TopicSem
11 홍진희 .연세대 111 patients WXS  TopicSem
11 임영균 Variant Analysis with Pancreatic cancer FNA sample  MAInfo
13 박유미 Pharmacogenetics at scale: An analysis of the UK Biobank     J.Club
13 안세환 Evaluation of Connectivity Map shows limited reproducibility in drug repositioning     J.Club
15 서명의 Variants in H.pylori associated with Clarithromycin resistance phenotype  TopicSem
15 조민아 Exploration and preprocessing of EOAD​ (Early Onset of Alzheimer  TopicSem
15 김주연 Estimating occurrence of adverse drug event risk genotypes with UK Biobank: data exploration  BioEMR
15 한봄 Assessment of case-control studies  SysBiol
18 부은경 Additional analyses to explain gender difference in Parkinson’s Disease  TopicSem
18 한봄 Updates of CBZ-SCAR project  TopicSem
18 권호식 Variants related to MTX efficacy or toxicity reported in PharmGKB and Clinical significance in ClinVar   MAInfo
20 홍진희 wgs is more poweful than wes for detecting exome variants     J.Club
20 김효정 An ancillary genomics system to support the return of pharmacogenomic results     J.Club
22 김형준 HealthAvatar blockchain and PHR type  TopicSem
22 임영균 Concentration ratio of tacrolimus as indicator in follow-up of patients received transplant   TopicSem
22 김효정 Query design for K-CDM ADR studies  BioEMR
22 박유미 GVB score optimization to reduce neutral variant effects  xMutant
25 윤선민 WES analysis of 25 patients with post ERCP pancreatitis  TopicSem
25 박유미 Comparing characteristics between statistical tests and scoring methods  TopicSem
25 임영균 Drug response & Prognosis measurement in Cancer Research   MAInfo
27 조민아 Allele Frequency of Pathogenic Variants Related to Adult-Onset Mendelian Diseases     J.Club
27 김지헌 The emerging landscape of health research based on biobanks linked to electronic health records: Existing resources, statistical challenges, and potential opportunities     J.Club
29 김효정 Appendix for Clinical Genome Data Model towards Precision Medicine  TopicSem
29 김주연 Estimating occurrence of ADR genotypes in UK Biobank: obtaining prescription counts  TopicSem

2020-05:
02 최선 DeepTox_Toxicity Prediction using Deep Learning     J.Club
02 김형준 Toward a Model for Personal Health Record Interoperability     J.Club
04 박유미 Defining anticoagulant-induced adverse reaction  TopicSem
04 김효정 Pharmacogenomic Clinical Decision Support: Modular Implementation of CPIC Guideline   TopicSem
04 박유미 COVID-19 data in the UK Biobank  SysBiol
04 최선 Reflection of expert advice on K-CDM scenario_1  BioEMR
04 최선 Consideration on study subjects utilizing UKbiobank  xMutant
07 김주연 Synthetic association study for 6-mercaptopurine intolerance  TopicSem
07 유경훈   TopicSem
07 권호식 HD-MTX : BUN & Candidates from Fold-Cr  MAInfo
09 윤선민 Blacklisting variants common in private cohorts but not in public databases optimizes human exome analysis     J.Club
09 임영균 A reference map of the human binary protein interactome     J.Club
11 안세환 Discovering FSGP using gene expression signature and fold change  TopicSem
11 권호식 TM7SF3 induced Renal Toxicity in ALL administered with MTX  TopicSem
11 박유미 Update in UK Biobank data table  xMutant
11 김주연 Immune response in Parkinson’s disease driven by HLA display of α-synuclein peptides  BioEMR
11 김주연 Immune response in Parkinson’s disease driven by HLA display of α-synuclein peptides  BioEMR
11 김주연 Contribution of genetic variation in drug-drug-gene-interactions  SysBiol
11 김주연 Contribution of genetic variation in drug–drug–gene interactions  SysBiol
14 최선 EMR Study to verify the efficacy of lipilou  TopicSem
14 이우승 Genome Analysis of Uveal Melanoma   TopicSem
14 임영균 Progression of tacrolimus study  MAInfo
16 정문경 Aggregating multiple real-world data sources using a patient-centered health-data-sharing platform     J.Club
16 김주연 Pharmacogenomic-Based Decision-Support to Predict Adherence to Medications     J.Club
18 서명의 F10 amino acid changes identified from symptomatic subjects of Factor X deficiency  TopicSem
18 임영균 Cpeak/C0 as indicator in follow-up of patients received transplant  TopicSem
18 홍진희 illumina sequencing WES 111 samples  SysBiol
18 윤선민 Tables and figures of AAP data analysis results using the modified workflow  xMutant
18 김효정 Code system review in UKBB:Read Codes and CTV3  BioEMR
21 부은경 Comparison of genetic loads between males and females with PD  TopicSem
21 김형준 Client-side request for PHR validation in Healthavatar blockchain  TopicSem
21 윤선민 Retrieval of AAP patients with acute pancreatitis caused by drugs in UK Biobank data  MAInfo
23 채정환 Development of CRISPR as an Antiviral Strategy to Combat SARS-CoV-2 and Influenza     J.Club
23 한봄 Predicted efficacy of a pharmacogenetic passport for inflammatory bowel disease     J.Club
25 한봄 Whole-exome sequencing identifies genetic risk factors associated with carbamazepine-induced SCAR  TopicSem
25 윤선민 Whole exome sequencing analysis of asparaginase-associated pancreatitis in Korean pediatric patients  TopicSem
25 한봄 Assessment of pharmacogenetic tests  BioEMR
25 조민아 Association analysis-Plink and Snpsift  SysBiol
25 이우승 Uveal melanoma germline analysis   xMutant
28 박유미 Distribution of 1KGP subjects with unclear molecular phenotypes for 17 genes with published CPIC guidelines  TopicSem
28 김효정 Pharmacogenomic Clinical Decision Support: Modular Implementation of CPIC Guideline   TopicSem
29 최선 Research design for TEA  MAInfo
30 서명의 SYCP2 translocation-mediated dysregulation and frameshift variants cause human male infertility     J.Club
30 부은경 Complementary genes contribute sex-biased vulnerability in diverse disorders     J.Club

2020-04:
02 윤선민 Modified figures and tables of WES analysis of AAP in Korean pediatric patients  TopicSem
02 박유미 Protective effect of F10 variants against coronary artery disease in the UK Biobank data  TopicSem
02 윤선민 Modified figures and tables of WES analysis of AAP in Korean pediatric patients  TopicSem
02 박유미 Protective effect of F10 variants against coronary artery disease in the UK Biobank data  TopicSem
02 최선 Rethinking drug design in the artificial intelligence era  MAInfo
04 서명의 Opposite modulation of RAC1 by mutations in TRIO is associated with distinct, domain-specific neurodevelopmental disorders     J.Club
04 부은경 Excess of singleton loss-of-function variants in Parkinson’s disease contributes to genetic risk     J.Club
06 김효정 Pharmacogenomic Clinical Decision Support: Modular Implementation of CPIC Guideline   TopicSem
06 김주연 Synthetic association analysis for tacrolimus response  TopicSem
06 김주연 SWEDEGENE-a Swedish nation-wide DNA sample collection for pharmacogenomic studies of serious adverse drug reactions