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Date
  • 월요일, 목요일 오전 9:30

  • 발표자
  • 이우승, 서명의, 임영균, 김형준, 정문경, 한봄, 김기태, 윤선민, 박유미, 김효정, 이정훈, 김민정, 이수현, 김주연, 민병주, 유경훈, 유승원, 안세환, 채정환, 권호식, 최선

  • 팀:   발표자:    제목/키워드:    날짜:   

    2019-01:
    03 박유미  
    03 김효정 Data Engineering and Processing in order to detect adverse drug reactions based on current KCDM DB 

    2018-12:
    03 박유미 Summary of replication study gene-level results for patients with variant angina 
    03 안세환 VVA Plots include Protein domains 
    06 이정훈 TP53 mutation with SYNE2 or SON mutation had Synergistic effect for paclitaxel, and predictive for prognosis in urogenital cancer 
    06 김주연 Evaluation of candidate SAGs with focus on drug-gene interactions 
    10 민병주 Application of next‑generation sequencing to analyze H pylori and host interactions 
    10 유경훈 Pharmacogenetics of escitalopram response: a candidate gene analysis  
    13 유승원  
    13 김효정 Construction of HLA Database (GDM) 
    17 채정환  
    17 권호식  
    20 최선  
    20 이우승  
    24 서명의  
    24 임영균  
    27 정문경  
    27 한봄  
    31 김기태  
    31 윤선민  

    2018-11:
    01 박유미 Understanding the sex bias in major depressive disorder : The male protective effect model 
    01 김주연 Progress in validation of synthetic association between candidate SAG and PGx variants 
    05 안세환 How to visualize protein domain in VVA 
    05 김효정 .Genome Data Model for Clinical Utilization  
    08 민병주 Detection of CYP2C19 Gene Polymorphisms in host and 16S/23S rRNA gene Polymorphisms in H.pylori 
    08 유경훈 Subgroup analysis based on antidepressant prescription information of 1000 MDD patients  
    12 채정환 taxol-ADR analysis study 
    12 이정훈 Linking the Regulatory Network of Gene Modules to Drug Sensitivity Reveals that Docetaxel and 5-FU Have a Synergistic Effect in Advanced Gastric Cancer 
    15 유승원 6MP analysis with normal NUDT15,TPMT phenotype  
    15 권호식 preliminary investigation : Variants and Genes related with adverse effects of MTX 
    19 최선 NSAIDs adverse effects detected by K-CDM 
    19 이우승 Analysis of LOH Affecting Breast Cancer Survival  
    22 서명의 Chromogenic activity evaluation in catalytic domain of FX 
    22 임영균 Identification of Synthetic Cancer Survival and Synthetic Cancer Survival Burden in Lung Adenocarcinoma 
    26 정문경 Avatar Beans - Symptom Survey 
    26 한봄 Steroid-Induced Hyperglycemia 
    29 김기태 Analysis of early response in depression 
    29 윤선민 L-asparaginase induced acute pancreatitis in 26 pediatric ALL patients 

    2018-10:
    01 이수현  
    01 유경훈 Subgroup analysis based on antidepressant prescription information of 1000 MDD patients  
    04 권호식 GDM visualization on the web 
    04 민병주 Optimal design of Helicobacter Pylori amplicon panel target region 
    08 김주연 Evaluation of the candidate genes in synthetic association to tacrolimus ADR biomarkers 
    08 안세환 Upgraded VVA Table using GDM 
    11 채정환 revision of taxol-ADR project analysis 
    11 유승원  
    15 ... 개교기념일 
    15 ... 개교기념일 
    18 최선 AvatarBeans_Initial draft and considering issues 
    18 Kelsey Self-Introduction and summary of past research (Genome sequencing and protein domain annotations of Korean Hanwoo cattle identify Hanwoo-specific immunity-related and other genes) 
    22 이우승 Analysis of LOH Affecting Cancer Survival 
    22 서명의 Chromogenic activity of FX protein with variants and related protein structure 
    25 임영균 Identification of SCS pairs in public pancreatic cancer data 
    25 한봄 Steroid-induced Hyperglycemia 
    29 정문경 Avatar Beans: Test Result UI update/Visualization 
    29 김기태 Analysis of Early response in depression 

    2018-09:
    03 유경훈 Subgroup analysis based on antidepressant prescription information of 1000 MDD patients  
    03 유승원 6MP sensitivity analysis 
    06 안세환 Add VEP data to VVA 
    06 채정환 drug reaction analysis in cancer patient 
    10 서명의 Measuring activity of chromogenic FX protein with target variant 
    10 이우승 Analysis of LOH Affecting Cancer Survival 
    13 권호식 GDM conversion and visualization 
    13 임영균 Features associated immune checkpoint inhibitor 
    17 정문경 Avatar Beans - Test Result Page & UI flow revision 
    17 한봄 Steroid-Induced Hyperglycemia 
    20 김기태 Analysis of Early response in depression 
    20 박유미 Summary of replication study results for patients with variant angina 
    24 ... 추석 
    24 ... 추석 
    27 김효정 GDM; operational manager menu design  
    27 이정훈 NGS Sequencing to Detect Genetic Biomarker of Busulfan Induced Hepatotoxicity 

    2018-08:
    02 이우승 Analysis of LOH Affecting Cancer Survival 
    02 채정환 Breast cancer patient analysis using TCGA database  
    06 서명의 Overexpression of FX protein with target variant 
    06 임영균 SCS analysis in Pancreatic cancer 
    09 김형준 Updated process of HealthAvatar Agent API 
    09 정문경 Avatar Beans Nutrition - progress & more UX/UI ideas 
    13 박유미 Deriving the contribution of NUDT15 variants to enzymatic activity using a functional gene-level score 
    13 김기태 Analysis of Early response in depression 
    16 한봄 Drug induced hyperglycemia 
    16 김효정 Constructing an Integrated National Standard Drug Database for Utilization of Public Data in Korea 
    20 이정훈 Synthetic Cytotoxic Network based Supervised Network Propagation Approach Can Identify Paclitaxel Response of Cell Lines 
    20 김주연 Trial of validating genes with variants in synthetic association to PGx biomarkers using TCGA 
    23 이수현 K-CDM & K-Sentinel: Progression of active pharmacovigilance system in Korea 
    23 민병주 Application of custom oligo to analyze 16S, 23S rRNA in Helicobacter Pylori 
    27 ... GDA 
    27 ... GDA 
    30 ... GDA 
    30 ... GDA 

    2018-07:
    02 안세환 VVA plot using GDM 
    02 채정환 Current work and future plan 
    05 임영균 Characteristics of germline SCS pair  
    05 서명의 DNA transfection to 293 cell line for overexpression of FX with the variants 
    09 이우승 Survival Analysis- Cox Proportional Hazard of TNBC Analysis  
    09 정문경 Nutrition in Avatar Beans - Protein and Iron 
    12 김형준 Process of uploading data in GDM and Web portal  
    12 한봄 Drug-induced Hyperglycemia 
    16 김기태 Analysis of Early response in depression 
    16 박유미 Identifying potential major depressive disorder associated genes 
    19 김효정 Genomic Data Model for Clinical Utilization  
    19 이정훈 Bipartite approach for Metalab DRUG-ADR network 
    23 이수현 Warfarin and NOAC (Novel Oral AntiCoagulants) analysis using K-CDM PV 
    23 김주연 Statistics and interpretation of genes with variants in synthetic association to PGx variants 
    26 유경훈 Subgroup analysis based on antidepressant prescription information of 1000 MDD patients  
    26 유승원 6MP side effect analysis : pediatric ALL patients 
    30 민병주 Application of NGS to characterize genetic variants in Helicobacter pylori strains and host genome 
    30 안세환 Modified VVA Interface 

    2018-06:
    04 이우승 Progress in SNUH TNBC Survival Analysis  
    04 정문경 Avatar Beans - planning additional function re nutrition 
    07 임영균 TMB and Tumor immune in SCS 
    07 김형준 Current process of uploading data in GDM 
    11 서명의 1000 genome variants in CYP2C19 gene 
    11 한봄 Tumor-only analysis on rare cancer samples 
    14 윤선민 L-asparaginase associated acute pancreatitis in pediatric ALL patients 
    14 김효정 GDM: Progress on operational level  
    18 김기태 Analysis of Early response in depression 
    18 박유미 Identifying potential major depressive disorder associated genes 
    21 김주연 Interpretation of genes with variants in synthetic association to ADR biomarkers 
    21 민병주 Ampliseq based ADR(+ PGx SNP) targeted panel 
    25 이정훈 Link regulatory networks of gene modules to drug sensitivity reveals that Docetaxel and 5-FU have combined effects in advanced stage gastric cancer 
    25 이수현 K-CDM Pharmacovigilance (K-CDM PV) 
    28 유경훈 Subgroup analysis based on antidepressant prescription information of 1000 MDD patients 
    28 유승원 6MP project analysis : candidate genes and variants 

    2018-05:
    03 김형준 Healthavatar and Agents with Blockchain 
    03 정문경 Ideas for project: connecting nutrition data with clinical information 
    07 ... 공휴일 
    07 ... 공휴일 
    10 한봄 Tumor-only Analysis on Rare Cancer Samples 
    10 김기태 Analysis of response in depression : EN-RN vs. EY-RY 
    14 윤선민 WES analysis of AML samples according to neutropenia duration  
    14 박유미 Deriving the contribution of TPMT variants to enzymatic activity using a functional gene-level score 
    17 김효정 Standard Query Design for an Active ADR Signal Detection Knowledge Pipeline 
    17 이정훈 Link regulatory networks of gene modules to drug sensitivity reveals that Docetaxel and 5-FU have opposite effects in advanced stage gastric cancer 
    21 유승원 6MP-related neutropenia analysis2 
    21 이수현 RS-ADR: A reference standard for detection of adverse drug reaction signals using electronic health records database and web site demo  
    24 민병주 Somatic second hit mutation candidates in CNV-PTC patients 
    24 유경훈 Subgroup analysis based on antidepressant prescription information of 1000 MDD patients 
    28 박지연 mRNA processing analysis in thyroid cancer 
    28 김주연 Characteristics of genes synthetically associated to ADR biomarkers  
    31 안세환 Add knowledge bases to VVA 
    31 채정환 ongoing project and paper review 

    2018-04:
    02 한봄 Tumor-only analysis on rare cancer samples 
    02 김기태 Prediction of response in depression 
    05 임영균 GDM analytics 
    05 박유미 Assessment of Ergonovine-Induced drug hypersensitivity reactions in the diagnosis of Coronary Artery Spasm using resampling validation method 
    09 김효정 Genome data model for clinical use  
    09 이정훈 Inference of Digenic Disruption Networks for Synthetic Cytotoxicity 
    12 김민정 Extreme cases of CD - risc patients analysis  
    12 이수현 Review of previous studies for ADR reference and RS-ADR web page design 
    16 박지연 Update of alternative splicing analysis using RNA-seq data 
    16 김주연 Extracting genes with variants in synthetic association to PGx variants 
    19 민병주 CNV-PTC in a family with compound heterozygous APC gene mutations 
    19 유경훈 1T Depression Analysis: Patients characterization and subgrouping by prescribed drugs  
    23 유승원 6MP-related neutropenia of pediatric ALL patients 
    23 안세환 Add advanced features to VVA 
    26 채정환 current interesting issue and overall survival analysis 
    26 이우승 Comprehensive genetic alteration profiling for Triple-negative Breast Cancer patients by targeted kinome sequencing 
    30 서명의 Mutagenesis and transformation for FX chromogenic activity assay 
    30 임영균 GDM Analytics Annotation DB 

    2018-03:
    01 ... 공휴일 
    01 ... 공휴일 
    05 류영재 Allele matcher scoring scheme alterations 
    05 김주연 Interpretation of PGx variant candidate SAGs 
    08 김민정 annotating and using SIFT scores for analyzing depressive patients 
    08 이수현 Data-driven knowledgebase for pharmacovigilance using electronic health records database 
    12 박지연 Alternative mRNA processing in Thyroid cancer 
    12 이정훈 Inference of Digenic Disruption Networks for Synthetic Cytotoxicity 
    15 민병주 Maternal Insertion of APC gene in female CMV-PTC patients 
    15 유경훈 1T Depression Analysis: Patients characterization and subgrouping by prescribed drugs 
    19 유승원 6MP-related neutropenia of pediatric ALL patients 
    19 안세환 Future works of VVA 
    22 채정환 My current work and future plan 
    22 이우승 Comparing Genotyping Method with BLAST aligned bam on Sangerseq data 
    26 서명의 Additional variant selection for FX chromogenic activity assay 
    26 윤선민 Modified workflow and statistical methods for AAP analysis 
    29 김형준 Smart contract and Dapp in Healthavatar platform 
    29 정문경 Concepts on Visual Display of Quantitative Information by Edward Tufte 

    2018-02:
    01 김민정 menopausal women with stage 2 and stage 4 depression  
    01 이우승 The Prognostic Potential of Loss of Heterozygosity in Breast Invasive Carcinoma  
    05 서명의 Site-direct mutagenesis for FX protein activity assay 
    05 임영균 Drug sensitivity and SCS  
    08 김형준 Private Ethereum and Healthavatar 
    08 권호식  
    12 김기태 Prediction model for response in depression 
    12 윤선민 L-asparaginase associated acute pancreatitis in pediatric ALL patients 
    15 ... 공휴일 
    15 ... 공휴일 
    19 ... GDA 
    19 ... GDA 
    22 ... GDA 
    22 ... GDA 
    26 박유미 The characteristics of singleton variants in Autism Spectrum Disorder 
    26 김효정 Genome Data Model 

    2018-01:
    01 ... 공휴일 
    01 ... 공휴일 
    02 김주연 Gene set annotation of genes synthetically associated with PGx variants in GWAS 
    02 민병주 Compound hetero truncation mutations in APC Reveal CMV-PTC as a Familial Adenomatous Polyposis Variant 
    04 유경훈 1T Depression Analysis-Patients characterization and subgrouping by prescribed drugs 
    04 이우승 The Prognostic Potential of Loss of Heterozygosity in Breast Invasive Carcinoma 
    08 서명의 Reinforcement for low coverage regions in DRP290 SNP Panel and LT Ampliseq WES 
    08 임영균 SCS analysis in MSI colon cancer 
    11 김형준 Updating mobile eCRF for DNet and ANet and Avatar 
    11 권호식 Exercise for Visualizing TCGA data  
    15 윤선민 Asparaginase-associated pancreatitis in pediatric ALL patients 
    15 김기태 Prediction model for 12 week remission in depression 
    18 박유미 The characteristics of singleton variants in neuropsychiatric disorders 
    18 김효정 K-CDM Genome progress  
    22 류영재 Allele matcher fine-tuning and scoring scheme alterations 
    22 이정훈 Inference of Digenic Disruption Networks for Synthetic Cytotoxicity 
    25 유경훈 1T Depression Analysis: Patients characterization and subgrouping by prescribed drugs 
    25 박지연 Pan-cancer analysis of alternative polyadenylation 
    29 김주연 Interpretation of the relation between SAGs of PGx variants and ADEs 
    29 민병주 Disease mechanism prediction for female specific CMV-PTC 
    31 ...  
    31 ...  

    2017-12:
    04 이우승 The Prognostic Potential of Loss of Heterozygosity in Breast Invasive Carcinoma 
    04 서명의 Experimental modification of Exome + DRP290 SNP Panel and 2nd test result 
    06 임영균 Re-analysis of SCS in colon cancer 
    06 김형준 Secure interconnection between XNet and BioEMR with JSON Web Token. 
    11 권호식 Plan for my Study Using TCGA data  
    11 김기태 Analysis of depression between early and later onset 
    13 윤선민 L-asparaginase associated pancreatitis in pediatric ALL patients  
    13 박유미 Association of genetic variants with variant angina in 80 case-control individuals 
    18 김효정 Establishment of Integrated Drug Database based on National Standards 
    18 류영재 NamedAlleleMatcher101 replication 
    20 이정훈 Microarray data analysis of multi-center breast cancer patients with distant metastasis 
    20 김민정 Analysis of stage 2 vs stage 4 depression patients  
    25 ... 공휴일 
    25 ... 공휴일 
    27 박호경 Drug adverse effects analysis with gene Expression 
    27 박지연 Statistical models using alternative polyadenylation data 

    2017-11:
    01 이우승 The Prognostic Potential of Loss of Heterozygosity in Breast Invasive Carcinoma  
    01 서명의 Design of Exome + DRP290 SNP Panel and experimental modification 
    06 권호식 Alamut Visual: Visualization engine for NGS analysis 
    06 서희원 Drug score distributions for the ten most-prescribed drugs in the 1000 Depressives. 
    08 김형준 Agent contraction with personal resource authorization list and storing CCR document type data in Avatar DB  
    08 임영균 SCS analysis in TCGA coad and cell lines data 
    13 김기태 Analysis of 1000 depressive 
    13 박유미 Category-dependent score adjustment schemes using genetic algorithm 
    15 김효정 Active ADR surveillance pipeline based on K-CDM  
    15 류영재 Identifying Splicing Synthetic Cancer Survival in Lung Adenocarcinoma using pooled isoform-based method  
    20 이정훈 Synthetic Genetic Targeting in Cancer Cell Vulnerability 
    20 윤선민 Analysis of 26 AML exome sequencing 
    22 김민정 List of genes associated with Major Depression  
    22 박호경 Drug adverse effects analysis with gene and protein Expression 
    27 박지연 Identification of a new subgroup characterized by long 3UTR in papillary thyroid cancer 
    27 김주연 Finding genes synthetically associated with PGx variants of GWAS 
    29 민병주 Allele specific analysis of APC gene exonic region in the CMV-PTC affected sibling pair 
    29 유경훈 1T Depression Analysis: Patients characterization and subgrouping 

    2017-10:
    02 ... TBC 
    02 ... TBC 
    04 ... 추석 
    04 ... 추석 
    09 ... 한글날 
    09 ... 한글날 
    11 권호식 Alamut-Focus : interactive variant filtration application for NGS analysis. 
    11 윤선민 Analysis of previously reported variants in pediatric ALL patients 
    16 박유미 Finding indirect associations of tagging SNPs with variant angina 
    16 박지연 Alternative polyadenylation in papillary thyroid cancer (PTC): Comparison of TCGA and SNUH data 
    18 류영재 Identifying Splicing Synthetic Cancer Survival in Lung Adenocarcinoma using isoform-based method 
    18 이정훈 Analysis of samples according to the number of SDCS pairs 
    23 김민정 skin cutaneous melanoma: primary vs. metastasis  
    23 박호경 Drug adverse effects analysis with gene and protein Expression 
    25 김주연 Finding genes synthetically associated to PGx variants in GWAS 
    25 민병주 Validation of disease related variants by using brain cancer panel 
    30 김효정 Standard Query Design for ADR Signal Detection on K-CDM structure 
    30 유경훈 1T Depression Analysis: Patients characterization and subgrouping 

    2017-09:
    04 김기태 Analysis of Ependymal tumor 
    04 권호식 Alamut-Batch : annotation engine for NGS analysis 
    06 류영재 Additional Methods of Identifying Splicing Synthetic Cancer Survival in Lung Adenocarcinoma 
    06 이정훈 SDL gene target drugs and drug sensitivity 
    11 김민정 Primary versus Metastatic Cancer 
    11 박호경 Drug adverse effects analysis with gene and protein Expression 
    13 박지연 Identification of alternative splicing events associated with pathological phenotypes of papillary thyroid carcinoma 
    13 김주연 Analysis of synthetically associated genes to PGx variants 
    18 민병주 Germline and somatic APC variants in the CMV-PTC affected sibling pair 
    18 이우승 CNV analysis of Cancer Panel 2.0 Data 
    20 유경훈 WXS analysis in 999 Depression patients with Baseline Information 
    20 서명의 Whole size FX cDNA library synthesis for cloning and activity assay data analysis plan 
    25 임영균 Drug sensitivity in SCS genes 
    25 서희원 Variants associated with an increased risk for severe neutropenia in patients receiving 6MP. 
    27 김형준 Agent matching and installation with personal resource authorization list 
    27 김기태 Analysis with pathway score in 999 Depressive patients 

    2017-08:
    02 박지혜 Figures and tables for PharmSafe and Enzyme kinetic weighted drug score 
    02 박호경 Drug adverse effects analysis using GTex and ABCB1 gene Interaction 
    07 김주연 Extraction and analysis of genes synthetically associated with PGx alleles 
    07 민병주 Validation of SNVs detected from Molecular pathology test by using KPCDx  
    09 유경훈 WXS analysis in 999 Depression patients with Baseline Information 
    09 이우승 Further analysis with Results of LOH Analysis 
    14 류영재 Identification of Synthetic Splicing Cancer Survival in Lung Adenocarcinoma 
    14 서명의 Synthesis cDNA library of FX gene from lymphoblast cell line 
    16 임영균 SCS analysis in Colon cancer cell lines  
    16 김형준 HealthAvatar API based on CCR+ and Composite DataElement 
    21 ... GDA 
    21 ... GDA 
    23 ... GDA 
    23 ... GDA 
    28 김효정 Query strategy for KAERS report generation on K-CDM structure 
    28 서희원 Analysis of previously reported variants associated with MP-induced neutropenia in ALL 
    30 박유미 Selecting appropriate cell lines for evaluating the utility of personalized gene-level scoring (PGS) system 
    30 윤선민 Asparaginase-associated pancreatitis in pediatric ALL patients 

    2017-07:
    03 김효정 Data processing for integrated drug database 
    03 박호경 Drug adverse effects analysis using GTex and ABCB1 gene Interaction 
    05 박지혜 Analysis of drug characteristics according to half-life class 
    05 김주연 Variant level analysis of genes synthetically associated with PGx alleles 
    10 민병주 Sequencing uniformity and genotype validation of KPCDx ver 2 
    10 송유림 RarePedia using Depression WXS data 
    12 이우승 Loss of Heterozygosity Analysis in Breast Invasive Carcinoma  
    12 서명의 Preparing cDNA library of FX gene by using lymphoblast cell lines 
    17 임영균 Aggregate DNAmethylation to gene scale 
    17 서희원 Identification of variants with a significantly lower frequency in cases than in controls 
    19 유경훈 Analysis for identifying genes and variants  associated with SIOH in 20 patients. 
    19 김형준 RESTful API with updated authentication and aurhorization in H.A.P 
    24 김기태  Pathway score for survival analysis in HNSC  
    24 윤선민 Asparaginase-associated pancreatitis in pediatric ALL patients 
    26 이정훈 Validation a Synthetic Dosage Cancer Survival Pairs using a Genomics of Drug Sensitivity in Cancer database 
    26 김효정 Query strategy for signal detection from clinical dataset 
    31 박지연 Alternative polyadenylation contributes to an indolent phenotype of RAS mutation in papillary thyroid cancer 
    31 박유미 Analysis for identifying genes associated with Variant Angina 

    2017-06:
    05 김주연 ADR risk determination according to PGx variant status쟵sing synthetic association 
    05 민병주 Optimal design of target sequencing experiment by using KPCDx ver 2.0 
    07 유경훈 Analysis for identifying genes and variants  associated with SIOH in 20 patients. 
    07 이우승 The Prognostic Potential of Loss of Heterozygosity in Breast Invasive Carcinoma  
    12 서명의 FX cDNA library preparation by using lymphoblast cell lines 
    12 임영균 Synthetic Cancer Survival relationship between DNA methylation and mutation 
    14 송유림 rarePedia filtering strategy 
    14 김형준 Creating the userdefined CDE through question items in Formbuilder 
    19 서희원 Mercaptopurine induced neutropenia in ALL  
    19 김기태 Survival analysis in HNSC with metabolism pathway - Interpretation of the result 
    21 윤선민 Asparaginase-associated pancreatitis in pediatric ALL patients 
    21 박유미 Establishing genetic model with consideration of gene-specific characteristics using a distance-based approach 
    26 이정훈 Data preprocessing for Gene Score, Overexpression and Methylation 
    26 박지연 Alternative Polyadenylation (APA) changes in Papillary Thyroid Cancer 
    28 류영재 Preliminary miRNA analysis on THCA samples 
    28 김혜현 Renewal Design of Avatar Beans 

    2017-05:
    01 서명의 Treatment of lymphoblastoid cell line containing FX variants 
    01 이우승 The Prognostic Potential of Loss of Heterozygosity in Breast Invasive Carcinoma 
    03 unknown  
    03 unknown  
    08 unknown  
    08 unknown  
    10 유경훈 Analysis for identifying genes and variants associated with SIOH in 20 patients. 
    10 송유림 RarePedia 관련 정리 상황 
    15 서희원 VVA: Gene-centered Visualization and Annotation for Exome Variant Analysis 
    15 임영균 Never-smoker LUAD analysis 
    17 김형준 Resource Authorization and data access control by HealthAvatar platform 
    17 김기태 Survival analysis with pathway score in metabolism pathways 
    22 윤선민 WXS to detect genes causing Asparaginase-associated pancreatitis  
    22 박유미 Identification of individual-level deleterious genes using a distance-based approach 
    24 김효정 Constructing an integrated drug database for utilization of public data in Korea 
    24 류영재 Further investigation on Synthetic Splicing Cancer Survival pairs in Lung Adenocarcinoma 
    29 이정훈 Synthetic dosage cancer survival analysis: Methylation and Under-expression 
    29 김혜현 Progress of DNet CDE FINAL version 
    31 박지혜 Analysis of drug characteristics according to half-life class 
    31 박호경 Drug adverse effects analysis using GTex and ABCB1 gene interaction 

    2017-04:
    03 송유림 RarePedia 2017 
    03 이계화  
    05 서희원 Comparison of significant variants in two Ritodrine induced-side effect cohorts 
    05 김형준 Updated database table of resource permission in Healthavatar platform.  
    10 김기태 Pathway score based on the gene damaging score 
    10 윤선민 WXS to detect genes causing Asparaginase-associated pancreatitis in 13 SNUH patients 
    12 박유미 Analysis for identifying genes associated with Variant Angina 
    12 김효정 Development of Algorithm for minimizing cost of drug combination with same therapeutic effect 
    17 류영재 Isoform fraction analysis in THCA 
    17 이정훈 Genetic programming to infer the optimal gene scoring method to classify genes 
    19 김혜현 Comparison derived DE to composite DE in discussion 
    19 박지혜 Pharmacokinetic effects of inter-individual variability in drug response 
    24 박호경 Drug adverse effects analysis using GTex tissue specific gene expression dataset 
    24 박지연 The effect of BRAF and RAS mutations on posttranscriptional regulation in Papillary Thyroid Cancer 
    26 김주연 ADR risk determination according to PGx variant status using synthetic association 
    26 민병주 NGS based cancer panel ver 2 design for actual target regions 

    2017-03:
    06 김기태 Pathway score based on the gene damaging score 
    06 김혜현 Applying composite CDEs in eCRFs of Pharmacogenetic study 
    08 박유미 Translating phenotype into a functional gene-level score 
    08 김효정 DB normalization and tuning for calculatable drug master 
    13 류영재 Identification of synthetic aberrant splicing event pairs using pairwise survival analysis in colorectal cancer 
    13 이정훈 Genetic programming to infer the optimal gene scoring method to classify gene 
    15 윤선민 WXS to detect genes causing AAP in 13 SNUH patients  
    15 박지혜  
    20 박호경 Drug adverse effects analysis using GTex tissue specific gene expression dataset 
    20 박지연 Analysis of BRAF and RAS mRNA expression in SKCM and THCA 
    22 김주연 ADR risk determination according to PGx variant status using synthetic association 
    22 민병주 NGS cancer panel design and experimental modification 
    27 이우승 The prognostic potential of loss of heterozygosity in breast invasive carcinoma  
    27 임영균 TCGA never smoker LUAD mutation profile 
    29 서명의 Validation for candidate genes in familial-NMTC cases 
    29 이수현 K-CDM scenario of vancomycin associated acute kidney Injury 

    2017-02:
    01 박지연 Posttranscriptional regulation in skin cutaneous melanoma 
    01 김주연 ADR risk determination according to FDA or PREDICT SNP genotype using synthetic association 
    06 민병주 NGS Technology base Pan-cancer diagnostic panel 
    06 이우승 The prognostic potential of reversal loss of heterozygosity in breast invasive carcinoma 
    08 서명의 Comparison of manual and semi-automatic NGS result 
    08 임영균 SMC lung cancer data analysis result 
    13 이수현 K-CDM Allopurinol Scenario 
    13 서희원 Association of ADRA1A polymorphism with Ritodrine-induced Pulmonary Edema in 13 pregnant women. 
    15 이계화 The Doctor’s Seq Project:  
    15 송유림 Association between ApoE variants and Alzheimer’s disease 
    27 홍주영 The Individual Drug-Fit Report 
    27 김형준 POST API(data creation) in HealthAvatar platform. 

    2017-01:
    02 임영균 Analysis plan of SMC lung cancer data. 
    02 이수현 K-CDM Structure and Future Works for Drug Safety  
    04 송유림 Identifying the new susceptibility loci of Alzheimer’s Disease by WXS 
    04 이계화 Patient-centered reconstruction of candiate genes associated with MRONJ event time  
    09 서희원 WXS to Identify Cancer Clearing Genotypes from Matched Donor-recipient Pairs. 
    09 이정훈 Inference of Gene Scoring Method for Disease Gene Prediction using optimization 
    11 김형준 Cordination of value domain of user-defined DE with recommended CDE in Easyformbuilder. 
    11 김기태 Pathway damaging score based on the gene score in the Head and Neck squamous cell carcinomas  
    16 윤선민 WXS to detect genes causing AAP in 13 SNUH patients 
    16 박유미 Translating CYP2D6 enzyme activity into a functional gene-level score 
    18 김효정 Internet of Avatars, Agents, and Apps; Flexible On-demand Healthcare Information System Architecture 
    18 류영재 Identification of alternative splicing event pairs and their effects on survival using pairwise survival analysis 
    23 홍주영 Drug Interaction Score 
    23 김혜현 Development and validation of Dictionary cCDE 
    25 박지혜 Calculating weighted drug score using drug half-life parameters 
    25 박호경 Drug adverse effects analysis using GTex tissue specific gene expression dataset 

    2016-12:
    05 홍주영 PharmGene Platform 
    05 김형준 Design of HealthAvatar API and current status of API implementation. 
    07 김기태 Pathway damaging score based on the gene score in the Head and Neck squamous cell carcinomas  
    07 윤선민 WXS to detect genes causing L-asparaginase-associated pancreatitis in ALL patients 
    12 서희원 WXS to Identify Cancer Clearing Genotypes from Matched Donor-recipient Pairs 
    12 김효정 HIRA 처방 공개 데이터 탐색적 분석 
    14 류영재 Methodology for identifying the effects of alternative splicing events on survival using pairwise survival analysiso 
    14 이정훈 Synthetic dosage cancer survival: pan-cancer analysis for systematic inference of negative genetic interaction 
    19 김혜현 Revised figures of cCDE types 
    19 박지혜 Pharmacokinetic effects of inter-individual variability in drug response 
    21 박호경 drug adverse effects analysis using GTex tissue specific gene expression 
    21 박지연 Posttranscriptional analysis of public melanoma RNA-seq data 
    26 김주연 Determining ADR risk according to FDA & PREDICT SNP genotype 
    26 민병주 Changes in coagulation factor activity induced by F10 inhibitor 
    28 이우승 The prognostic potential of loss of heterozygosity in breast invasive carcinoma 
    28 서명의 FNMTC candidate gene shared between two ns-FNMTC families 

    2016-11:
    02 윤선민 Whole-exome sequencing to detect genes causing L-asparaginase-associated pancreatitis in 12 ALL patients 
    02 서희원 Variant Visualization and Annotation Tool Available Online 
    07 김효정 IoA3 Homepage for Developer 
    07 류영재 Survival analysis of mNA isoform variation using TCGA datai 
    09 김주연 Gene score distribution of genes including or proximate to pharmacogenomic SNPs 
    09 김혜현 Developing Xnet CDE Browser 
    14 박지혜 PharmSafe - Personalized Prevention of Adverse Drug Reaction  
    14 박호경 Replication of Characterizing perturbation sensitivity of genes  
    16 박지연 Validation of TCGA SKCM analysis using public data  
    16 이정훈 Synthetic dosage cancer survival gene pairs 
    21 이우승 Loss of Heterozygosity Analysis across 4 Cancer Types 
    21 임영균 Identification of Synthetic Cancer Survival and Synthetic Cancer Survival Burden  
    23 민병주 Genetic characteristic of factor X variants in human populations 
    23 이수현 Summary of Sentinel Operations Center meeting and K-CDM elaboration plan  
    28 서명의 FNMTC candidate gene validation using Sanger sequencing and THCA data 
    28 이계화 Doctor’s Seq Project:  
    30 송유림 Analysis of ADSP WXS data 
    30 박유미 Comprehensive Evaluation of Gene-level Scoring Systems for Deleterious Exome Variants: Score Normalization issues 

    2016-10:
    03 unknown 개천절 
    03 unknown 개천절 
    05 김현대 UCSD에서 참여했던 여러 연구들과 data validation 적용 방안 
    05 박지혜 PharmSafe - Personalized Prevention of Adverse Drug Reaction 
    10 김주연 South Korean geriatrics on Beers Criteria medications at risk of adverse drug events 
    10 민병주 Molecular defects in the factor X gene caused by heterozygous variant in EGF2 domain 
    12 이우승 Loss of heterozygosity as prognostic marker in Breast invasive carcinoma 
    12 서명의 Experimental validation for candidate variants of FNMTC family 
    17 전체 TBC 2016 
    17 전체 TBC 2016 
    19 임영균 Differential characteristics among SCS burden groups  
    19 송유림 Identification of disease-specific variants in Alzheimer’s Disease 
    24 김형준 Current status of HAP server. 
    24 이계화 Doctor’s Seq Project - Basic Statistics and Incidental Findings 
    26 이수현 K-CDM ETL test result using SNUH data 
    26 홍주영 Pharmsafe Platform 
    31 박유미 Comprehensive Evaluation of Gene-level Scoring Systems for Deleterious Exome Variants: GDI, RVIS, and PGDS 
    31 김기태 WXS analysis in COPD patients with LABA/LAMA treatment 

    2016-09:
    05 홍주영 Knowledge based Pharmsafe Database 
    05 이계화 Gender difference of drugscore 
    07 서희원 Depression WXS QC - 10 samples of FASTQ from Illumina HiSeq 2500 
    07 송유림 Descriptive statistics about distribution of variants in Alzheimer’s Disease group 
    12 김형준 Process of Agent registration for HealthAvatar API  
    12 김기태 WXS analysis in COPD patients with LABA/LAMA treatment 
    14 unknown 추석 
    14 unknown 추석 
    19 윤선민 The human diseases network using genomic information 
    19 박유미 Evaluation of gene-wise scores; Personalized Gene Deleteriousness Score (PGDS) 
    21 김효정 Health Avatar Platform: Component Description 
    21 류영재 Methods for assessing effects of variants on alternative splicing and disease 
    26 이정훈 Synthetic dosage cancer survival 
    26 김혜현 MDR기반 PHR 운용을 위한 참조모델 
    28 박지연 Identification of clinically relevant genes from mRNA and splicing changes of skin cutaneous melanoma  
    28 박호경 Replication of Characterizing perturbation sensitivity of genes 

    2016-08:
    01 박유미 Comparing gene scoring methods: RVIS, GDI, and Personalized Gene Damaging Score (PGDS) 
    01 김효정 DB construction for minimizing cost of drug combination with same therapeutic effect  
    03 류영재 Motif analysis of RNA-binding proteins in papillary thyroid carcinoma samples 
    03 이정훈 Network Analysis of Dysfunctional Genes in Endodermal Cancers 
    08 박호경 Replication of Characterizing perturbation sensitivity of genes 
    08 박지연 Identification of survival-associated genes in cutaneous melanoma 
    10 김혜현 Revised evaluation results for semantic relationships of CDEs 
    10 김주연 Finding genomic features that affect drug response 
    15 unknown 광복절 
    15 unknown 광복절 
    17 박지혜 Calculating drug score by ATC class with multiple variant scores  
    17 민병주 Heterozygous variant in EGF2 domain of coagulation Factor X 
    22 unknown GDA 
    22 unknown GDA 
    24 unknown GDA 
    24 unknown GDA 
    29 이우승 Cancer Panel - KRAS region calling - 
    29 임영균 Identification of SCS and SCS burden in multiple cancer 
    31 서명의 Validation of candidate variants for the FNMTC family 
    31 이수현 K-CDM design based on sentinel CDM 

    2016-07:
    04 이정훈 Pan-cancer Analysis for Disrupted Gene Network via Developmental Origins 
    04 김혜현 Constraints and evaluation results for semantic relationships of CDEs 
    06 박지연 Survival analysis associated with gene regulation in TCGA SKCM 
    06 박호경 Replication of Characterizing perturbation sensitivity of genes 
    11 박지혜 Calculating drug score by ATC class with 6 multiple variant scores 
    11 김주연 Assessing drug response based on genetic mutation and expression 
    13 민병주 Two structural variants in the CMV-PTC patients inherited from their parents 
    13 이우승 L.O.H Analysis on 5 Cancer types data from TCGA 
    18 서명의 WES analysis to detect shared causal genes in FNMTC families 
    18 임영균 Identification SCS in COAD 
    20 이계화 MRONJ analysis with osteoporosis controls 
    20 이수현 MetaLAB and MetaNurse algorithm review 
    25 서희원 Evaluation of read-level alignment for F10 variants from Ion Proton. 
    25 김형준 Avatar data query of HealthAvatar API 
    27 김기태 Methodology for the identifying the functional target across the carcinomas (squamous cell carcinomas)  
    27 윤선민 The analysis for implicating sequence variants in human diseases 

    2016-06:
    01 박호경 Replication of Characterizing perturbation sensitivity of genes 
    01 박지연 Comparison of mutation effect on alternative splicing in TCGA thyroid and melanoma data  
    06 unknown 휴일 
    06 unknown 휴일 
    08 김주연 Mutations that change drug response due to altered gene expression 
    08 임영균 Identification of co-methylation patterns in COAD  
    13 이우승 Cancer Panel Packages with additional HY data 
    13 서명의 Rare indel variant analysis in WES data of FNMTC family 
    15 민병주 Maternal germline mosaicism and new candidate variant in CMV-PTC 
    15 이수현 EMR based adverse drug reaction detection for pharmacovigilance 
    20 이계화 Multiple prediction score comparison 
    20 서희원 Comparison between the results of NGS and SNP Type Assays 
    22 김형준 Modified URI pattern and query string of HealthAvatar API . 
    22 김기태 WXS analysis in COPD patients with LABA/LAMA treatment 
    27 윤선민 The complementary interpretations between two pathway groups  
    27 박유미 Simulation of variants aggregation method within genes 
    29 김효정 Development of Algorithm for minimizing cost of drug combination with same therapeutic effect 
    29 류영재 Introduction of SUPPA and comparison between alternative splicing analysis tools 

    2016-05:
    02 김주연 Predicting drugs related to treatment failure based on CNVs 
    02 민병주 Candidate variant analysis to identify causal mutation for cribriform morular variant papillary thyroid carcinoma 
    04 이우승 LOH Analysis - Validation DP filtering with Sanger sequencing data 
    04 서명의 Rare variant analysis in FNMTC by sequencing 3 affected individuals and 2 unaffected family members 
    09 임영균 Identification of Synthetic Cancer Survival and Synthetic Cancer Survival Burden  
    09 이수현 Application of common data model for ADR detection using MetaLAB, MetaNurse  
    11 이계화 MRONJ reanalysis results 
    11 서희원 Busulfan induced hepatotoxicity associated genes in Busulfan pathway 
    16 김형준 Design of HealthAvatar API 
    16 김기태 Methodology for the identifying the functional target across the carcinomas (squamous cell carcinomas) 
    18 윤선민 Research for investigating genomic characteristics in human disease network 
    18 박유미 Analysis of genetic variant within putative miRNA binding sites; GNB3 and CDCA3  
    23 김효정 Health Avatar: flexible on-demand healthcare information system architecture  
    23 류영재 BRAF/RAS intron retention comparison using MISO 
    25 김혜현 New figures and tables for the paper of composite common data elements 
    25 이정훈 Endodermal origin tumors correlate with the class of tumor suppressor gene mutation 
    30 한지예 Drug-Metabolizing Enzymes among Different Populations 
    30 박지혜 Calculation of drug score by ATC class 

    2016-04:
    04 이계화 Functional Classification of the MRONJ Candidate Genes 
    04 서희원 Evaluation of filtering strategies to identify disease-associated genomic variants in multiple disease categories. 
    06 김기태 Methodology for the identifying the functional target across the carcinomas (squamous cell carcinomas)  
    06 윤선민 Research for investigating characteristics of genome by human disease 
    11 김형준 Uploading arthroNet DEs and Forms 
    11 박유미 Simulation for comparative evaluation of variant aggregation methods on diverse underlying disease architecture 
    18 김효정 Health Avatar Platform: Flexible On-demand Healthcare Information System Architecture  
    18 류영재 BRAF/RAS intron retention comparison using MISO 
    20 이정훈 Synthetic Dosage Cancer Survival: a computational approach for identification of negative genetic interaction 
    20 김혜현 CDE Browser classified by CMO, Forms in Xnet  
    25 한지예 Drug-metabolizing CYP450s (2C9) and drug target (warfarin) in Different Ethnicity  
    25 박지혜 Pharmacokinetic effects of inter-individual variability in drug response 
    27 박호경 Replication of Characterizing perturbation sensitivity of genes  
    27 박지연 Identification of alternative splicing and polyadenylation events differentially regulated in BRAF and RAS mutations of papillary thyroid cancer 

    2016-03:
    02 서희원 Effective filtering strategies, comparison of local de novo assembly, depth and T1GP filters 
    02 김형준 Review of formbuilder in MDM portal 
    07 윤선민 The analysis for association between gene and classified diseases 
    07 박유미 Comparing variant aggregation methods using Alzheimer’s Disease Sequencing Project WXS Data 
    09 김효정 Health Avatar Platform; Role Based, Problem-wise Health Information System Architecture 
    09 류영재 Testing PharmPortal drug sets for validity 
    14 김혜현 Review of NIH CDE Repository and Design of CDE Browser 
    14 한지예 Continued Research on Drug-Metabolizing CYPs and Personalized Therapy 
    16 이정훈 Synthetic dosage cancer survival analysis 
    16 박호경 Replication of Characterizing perturbation sensitivity of genes 
    21 이우승 Progress of Loss of heterozygosity analysis with TCGA data 
    21 박지혜 Pharmacokinetic effects of inter-individual variability in drug response  
    23 임영균 Identification prognosis of patients with MSI in COAD 
    23 김주연 Predicting high risk drugs in 1KP based on pharmacogene CNVs 
    28 민병주 Germline loss-of-function mutations to familial and sporadic schwannomatosis 
    28 박지연 Analysis of alternative polyadenylation (APA) in papillary thyroid cancer 
    30 이수현 RS-ADR : A reference standard for detection of adverse drug reaction signals using electronic health records database 
    30 서명의 Rare variant analysis in non-syndromic FNMTC families by using WES 

    2016-02:
    01 박지혜 Pharmacokinetic effects of inter-individual variability in drug response 
    01 박지연 Effect of BRAF and RAS mutations on alternative polyadenylation in papillary thyroid cancer 
    03 김현대 Necessity and effect of extended DEs 
    03 박호경 Replication of Characterizing perturbation sensitivity of genes  
    15 민병주 Candidate variant analysis to identify cancer clearing genotype  
    15 김주연 Variant centric analysis for MRONJ 
    17 서명의 WES analysis of non-syndromic FNMTC by sequencing 3 affected individuals and an unaffected family member 
    17 이우승 Progress of study of loss of heterozygosity analysis with TCGA data 
    22 unknown GDA 
    22 unknown GDA 
    24 unknown GDA 
    24 unknown GDA 
    29 임영균 Identification of Synthetic Cancer Survival and Synthetic Cancer Survival Burden in Multiple Cancer 
    29 이계화 MRONJ candidate gene analysis 

    2016-01:
    04 박호경 Replication of “Characterizing perturbation sensitivity of genes ~" 
    04 박지연 Role of BRAF and RAS Mutations on posttranscriptional regulation in papillary thyroid carcinoma 
    06 김주연 Finding genetic variants associated with increased risk for BRONJ 
    06 최윤영 Troubles when handling clinical data in TCGA of STAD 
    11 민병주 Candidate variant analysis to identify cancer clearing genotype 
    11 이우승 Cancer Panel Package and Summary of Progress 
    13 서명의 Comparison of customized cancer core panel with ion cancer hotspot panel 
    13 이계화 BRONJ data analysis: Gene-centric approach 
    18 서희원 VVA: Variant Visualization and Annotation. 
    18 박유미 APEX1_GNB3 in early neutropenia cases 
    20 임영균 SCS paper modified Figures and Table. 
    20 류영재 Updated Database and Fine-tuning plans 
    25 이정훈 Synthetic dosage cancer survival in LUAD 
    25 김혜현 MELLO Website Analytics 
    27 김형준 EasyFormbuilder 수정 및 추가 진행사항 
    27 윤선민 The interactome of association between gene and classified diseases 

    2015-12:
    02 박지연 Updated analysis of alternative polyadenylation in cardiac hypertrophy  
    02 김주연 Breakeven analysis of preemptive genotyping 
    07 최윤영 MSI subtype in Gastric Cancer 
    07 민병주 Candidate variant analysis to identify causal mutation for sporadic multiple schwannomas 
    09 이우승 Prgress of Cancer panel and Loss of heterozygosity analysis 
    09 서명의 Target sequencing by using cancer core panel for target therapies 
    14 임영균 Identification of Synthetic Cancer Survival and Synthetic Cancer Survival Burden in Multiple Cancer 
    14 이계화 Correlation Between the Number of Genes and Drug Deleteriousness Score 
    16 김형준 Additional functions in Easyformbuilder 
    16 윤선민 Characteristics of human genes using ppi information 
    21 류영재 PharmPortal Updates 
    21 박유미 Candidate leukemic variants effect on 181 ALL patients 
    23 서희원 Ritodrine meta-pathway and sub-pathway scores. 
    23 이정훈 intratumor heterogeneity analysis 
    28 김혜현 Figures and tables for semantic relationships 
    28 한지예 Pharmacogenomics: Polymorphic CYPs in Personalized Therapy 
    30 박지혜 Analysis of COPD microarray 
    30 김현대 Data validation using extended DEs in MDR 

    2015-11:
    02 민병주 Candidate variant analysis to identify cancer clearing genotype 
    02 임영균 Identification of Synthetic Cancer Survival and Synthetic Cancer Survival burden in multiple Cancer   
    04 서명의 Variant filtration to detect causal gene of non-syndromic FNMTC 
    04 이수현 RS-ADR Figures & Tables  
    09 unknown TBC 2015 
    09 unknown TBC 2015 
    11 이계화 BRONJ Data Analysis Plan 
    11 서희원 Matched-pair analysis of a breast cancer patient. 
    16 박유미 6-mercaptopurine related neutropenia cases from ALL;Statistical test results using 1KP data 
    16 윤선민 The correlation between function of genes and variants 
    18 김형준 Processing of Easy FormBuilder  
    18 류영재 PharmPortal update 
    23 이정훈 Synthetic Cancer Survival by Dosage 
    23 김혜현 Upgraded CMO 
    25 한지예 Cost-effectiveness of a genetic testing to reduce patients ADRs 
    25 박지혜 Weighted drug score using pharmacokinetic parameters 
    30 김현대 Data Validation using MetaData in Dnet 
    30 박호경 Replication of “Characterizing perturbation sensitivity of genes ~" 

    2015-10:
    05 서희원 Highly significant variants found in Yutopar subjects. 
    05 이우승 Progress of Loss of Heterozygosity Analysis 
    07 김기태  
    07 윤선민 The complementary interpretations between two pathway groups 
    12 박유미 Fluidigm Results Summary and Drug Score Update Issues 
    12 류영재 Summary Page Development for PharmPortal 
    14 이정훈 Results of Synthetic Cancer Survival by Dosage 
    14 김혜현 Compare models, CCD, CCR, and FHIR and apply metadata among them  
    19 한지예 Proposal on Machine Learning Application to Cancer Pharmacogenomics 
    19 박지혜 Pharmacokinetic effects of inter-individual variability in drug response 
    21 김현대 Error report in Dnet 
    21 박호경 RNA sequencing data and analysing tool 
    26 박지연 Alternative splicing in papillary thyroid cancer 
    26 김주연 Economic evaluation of preemptive genotyping 
    28 최윤영 Heterogeneity of MSI-H gastric cancer and its clinical significancy 
    28 이우승 Findings of LOH analysis across TCGA 7 cancers 

    2015-09:
    02 김효정 Development of Algorithm for Minimizing Cost of Drug Combination with the Same Therapeutic Effect 
    02 박지혜 Calculating weighted drug score using kinetic parameters 
    07 이정훈 Current_progress_of_the_SDL_analysis 
    07 김혜현 Metadata Registry based Creation and Validation of Personal Health Record 
    09 한지예 Interest in Study of Genomics of Drug Sensitivity in Cancer 
    09 김현대 Lab, Medication Dictionary for Semantic Validation 
    14 류영재 PharmPortal: Core Function Development on the Web 
    14 박호경 RNA sequencing data and analysing tool 
    16 박지연 Cornell RNA-seq analysis 
    16 김주연 Preemptive genotyping to prevent ADEs: figures and tables 
    21 민병주 Validation of Gly134Arg heterozygous variant in coagulation Factor X 
    21 김형준 Easy Form Builder(with excel template) 
    23 서명의 WES analysis of non-syndromic FNMTC in two families 
    23 이수현 RS-ADR related study review and Part2 process 
    28 unknown 추석 
    28 unknown 추석 
    30 임영균 Lung cancer cell line sequence analysis 
    30 이계화 Market-Safety Score Distribution of Drugs in DrugBank  

    2015-08:
    03 박호경 RNA sequencing data and analysing tool 
    03 박지연 Alternative polyadenylation in cardiac development and hypertrophy 
    05 김주연 Results for preemptive genotyping to prevent adverse drug events 
    05 민병주 WES to identify cancer clearing genotype 
    10 이우승 Verifying reversal Loss of heterozygosity 
    10 서명의 Causal gene identification of non-syndromic FNMTC by using WES data 
    12 임영균 Figures & Tables for SS study 
    12 이수현 Overall concepts of RS-ADR and Implementation Status 
    17 이계화 A comparison of allele frequency differences between case and control: COPD data 
    17 김형준 Easy Formbuilder 진행상황2 
    19 서희원 Targeted sequencing to detect abnormalities causing Yutopar side effects in 11 pregnant women    
    19 김기태 Identifying the clinical implication of the genetic combinatory factors across the squamous cell carcinomas 
    31 윤선민 The plan of study for rare variants associated to complex disease 
    31 박유미 Sequencing Data Summary and Directory 

    2015-07:
    01 민병주 NGS based pan-cancer diagnostic panel 
    01 이우승 Reversal loss of heterozygosity in UCEC 
    06 서명의 Genome analysis of non-syndromic Familial NMTC 
    06 임영균 Identification of Synthetic Survival and Synthetic Survival burden in multiple Cancer 
    08 이수현 RS-ADR concept and Reference set construction (Part 1) 
    08 이계화 BRONJ-Review of previous research and building an analysis strategy 
    13 김혜현 Design of Medication Dictionary for developing cDE 
    13 김형준 Processing of Easy Form Builder 
    15 김기태 Decision and Revision on the FAT1 study 
    15 윤선민 Results of the properties of biological network using protein interaction 
    20 박유미 Ion Proton WXS data curation performance issues 
    20 김효정 Quality Evaluation of a Hospital Information System in a Tertiary General Hospital 
    22 류영재 PharmPortal: Request Processing Flow 
    22 이정훈 Data manipulations and method for gene selection in SDL 
    27 서희원 Comparison between curatedVCF and rawVCF of WXS data from Ion Proton 
    27 한지예 Research on Diabetes and Pharmacogenomics 
    29 박지혜 COPD exome seq analysis  
    29 김현대 Lab Dictionary:permisibble range and normal range 

    2015-06:
    01 민병주 Core cancer panel design for actual target regions 
    01 이우승 Brief Summary of RAL and Reversal LOH 
    03 서명의 Exome sequencing to detect inherited causes of FNMTC 
    03 임영균 Patient survival trends of synthetic survival burden  
    08 이수현 RS-ADR 1.0 update lists 
    08 이계화 Review of the cardiovascular disease cohort study (ARIC study) 
    10 서희원 Single-marker analysis for Busulfan project 
    10 김형준 Processing of BMeSH and EasyFormbuilder 
    15 윤선민 The workflow of WXS SG20 analysis 
    15 류영재 PharmPortal: Updated Web design 
    17 박유미 Targeted sequencing data analysis of 6-mercaptopurine related neutropenia cases from ALL 
    17 김기태 Functional pathway based approach for identifying the cancer prognostic signature 
    22 이정훈 Synthetic Dosage Lethality in Lung Adenocarcinoma 
    22 김혜현 Design of metadata based model transformation among different data models 
    24 박지혜 Pharmacokinetic effects of inter-individual variability in drug response 
    24 김현대 De validation error report 
    29 박지연 Integrated analysis of gene mutations and expression signatures on extrathyroidal extension in papillary thyroid cancer  
    29 김주연 Preemptive genotyping to prevent ADEs: ancestry-weighted calculation results 

    2015-05:
    04 이계화 Alzheimer’s Disease Sequencing Project (ADSP): Phenotype Data Preview 
    04 이수현 ADR Signals of MetaNurse and MetaLAB algorithms Release Plan  
    06 임영균 Identification of synthetic survival genes with survival analysis 
    06 서희원 Analysis results of linear regression with GS and called variants.  
    11 김형준 Multiple Contexts of DE 
    11 윤선민 The workflow of WXS GS20 analysis 
    13 김기태 Somatic mutation based approach for identifying the cancer prognostic signature 
    13 박유미 Workflow for an erroneous variant correction method 
    18 류영재 PharmPortal: Data integration and Web Design 
    18 이정훈 RNAseq data Filtering and Normalization and SDL regression analysis 
    20 이수연S Personal pharmacogenomics : pharmacological approach based on genomic variant 
    20 김혜현 Lifelog data in CCR with using MELLO terms 
    26 박지혜 Calculating weighted drug score using kinetic parameters 
    26 김현대 CHMR API for Speicific DE validation 
    27 박지연 alternative polyadenylation in heart development and disease 
    27 김주연 Preemptive genotyping for ADE prevention: ancestry weighted calculation scheme 

    2015-04:
    01 이수현 RS-ADRs laboratory test mapping strategy and RS-ADRs version2 plan 
    01 이계화 Tumor suppressor gene mutation status and chemotherapeutic response in Colon cancer 
    06 서희원 Targeted sequencing to detect abnormalities causing Busulfan side effects 
    06 박유미 Characterization of error sequences in Busulfan data 
    08 윤선민 The results of pathway analysis using protein domain  
    08 김형준 Overview of BMeSH browser and Easy Form Builder 
    13 김기태 Identifying the prognostic event in the Carcinomas sharing histopahtology 
    13 류영재 PharmPortal: ADR information extraction & integration 
    15 이정훈 RNAseq Normalization and SDL regression analysis 
    15 이수연S Personal pharmacogenomics : pharmacological approach based on genomic variant 
    20 김혜현 Three DE relationships with its features 
    20 박지혜 COPD Exome-seq analysis 
    22 김현대 CCR/CCD converter:Specific Validation 
    22 박지연 Alternative splicing study in papillary thyroid cancer  
    27 김주연 Preemptive genotyping for prevention of drug-related adverse events 
    27 민병주 Customized Cancer Panel based on two sample types 
    29 이우승 LOH(Loss of Heterozygosity) Analysis 
    29 서명의 Identification of inherited causes of FNMTC 

    2015-03:
    02 이계화 TSGs mutation status and survival in Ovarian cancer 
    02 이수현 RS-ADRs : A reference standard for detection of adverse drug reaction signals using electronic health records database 
    04 서희원 Investigation of systematic errors of called variants through alignment viewer. 
    04 김형준 Plan of advanced BMesh and EasyFormbuilder 
    09 윤선민 The design of simulated network using protein-protein interaction and perturbations 
    09 김기태 Review of National Cancer Institute Data catalog  
    11 박유미 OMIM database localization 
    11 류영재 PharmPortal: Drug Information database parsing 
    16 이수연S Personal pharmacogenomics : pharmacological approach based on genomic variant 
    16 이정훈 What is overexpression in Synthetic dosage lethality 
    18 김혜현 Definition of rules to descript how DEs are related in extended DE relationships 
    18 박지연 Integrated analysis of gene mutations and expression signatures on extrathyroidal extension in papillary thyroid cancer 
    23 김주연 Preemptive genotyping for prevention of drug-related adverse events 
    23 김현대 CCR/CCD converter (Insert API, Curation mode) 
    25 민병주 Cancer paenl design based on the combined methods for targeting 
    25 이우승 Result of Genome wide Analysis of non-coding region in cancer and Plan for methylation profile 
    30 서명의 Study plan for to detect causal variants in FNMTC 
    30 임영균 Identification of potential synthetic lethal genes with survival analysis 

    2015-02:
    02 김혜현 Process of building CCR+ template and conducting CCR+ validation 
    02 김주연 Preemptive genotyping for prevention of drug-related adverse events 
    04 박지연 Identification of marker genes for extrathyroidal extension 
    04 이정훈 Identifying genetic interaction of synthetic dosage lethal genes with survival analysis 
    09 박지혜 COPD Exome-seq Analysis 
    09 김현대 CCR/CCD converter 
    11 민병주 NGS panel design for cancer companion diagnostics of targeted chemotherapeutics 
    11 이우승 Replication : Genome wide Analysis of non-coding regulatory mutations in cancer  
    16 서명의 Finding causal variants in Familial non medullary thyroid cancer (FNMTC) 
    16 임영균 Identification of potential synthetic lethal gene pairs.  

    2015-01:
    05 이수현 AMIA 2014 review 
    05 김주연 AMIA: Developing a Formal Representation for Medication Appropriateness Criteria  
    05 김현대 AMIA:Visualization of Patient Prescription History Data in Emergency Care    
    05 김형준 Extending the HL7_LOINC Document Ontology Settings of Care    
    07 서희원 QC, alignment and statistical test result of 9 WXSs with Yutopar side effects 
    07 이우승 non-coding region analysis with replication time data 
    12 임영균 Identification of potential synthetic lethal gene pairs. 
    12 엄세인 Perturbation sensitivity_ 
    14 이수현 MetaLAB MetaNurse analysis result : table and figure 
    14 이계화 Mutation in tumor suppressor genes and chemotherapeutic response 
    19 김형준 Tool for Searching for DataElements 
    19 김기태 Association of FAT1 mutation with survival in HPV-negative patients with head and neck squamous cell carcinoma  
    21 윤선민 The comparison of the feature in biological network  
    21 박유미 Summary of HHA data analysis results 
    26 류영재 Pharmportal: pharmacogenomic database integration 
    26 이수연S Pharmportal :Provide drug information For personal pharmacogenomics interpretation  

    2014-12:
    01 이수연S A new boosting algorithm using biological knowledge for improved personal genome sequence analysis for the  
    01 서희원 Characteristics of genes with rare and deleterious mutations in 1KP samples 
    03 박유미 GWAS like association study results and sequence level analysis of HHA data 
    03 이우승 Replication of non-coding regulatory region analysis 
    08 김형준 UserDefined CRF of BioEMR 
    08 이수현 Figure and table of MetaLAB, MetaNurse algorithm result 
    10 류영재 Imputation of KARE data 
    10 이계화 Homozygous mutation in tumor suppressor gene and chemotherapy response 
    15 엄세인 Pertubation sensitivity; replication study 
    15 임재현 Gene prioritization  
    17 윤선민 The progress of comparison the feature of two groups in biological network 
    17 임영균 Identificiation of potential synthetic lethal genes with survival analysis  
    22 김기태 Somatic mutations of FAT1 in the Head and Neck Squamous cell Carcinoma 
    22 민병주 Targeted sequencing for 149 DNA samples by using PBAC6 panel 
    24 안선주 Review of TCGA data analysis article 
    24 서명의 Comparison of cancer panel designs based on two major capture methods 
    29 박지혜 Calculating weighted drug score using pharmacokinetic parameters 
    29 김주연 Preemptive genotyping for prevention of drug-related adverse events 
    31 김현대 CCR/CCD converter (in web sever) 
    31 김혜현 Build hemodialysis DEs according to ISO/IEC 11179 

    2014-11:
    03 김형준 Handling error of BioEMR 
    03 엄세인 Sequenza: Allele-specific CNA analysis on WES/WGS data 
    05 류영재 Drug-Causal Variant Relationship Identification 
    05 이수연S A new boosting algorithm using biological knowledge for improved personal genome sequence analysis for the personalized prevention of ADRs(PharmSafe)  
    10 이계화 Tumor Suppressor Gene Biallelic Status and Survival  
    10 임재현 Gene prioritization using perturbations in 1000 genomes population � 
    12 윤선민 The introduction to GRCh38/hg38 to analysis WGS data 
    12 김기태 Relationship of Major Wnt pathway genes and 15 nmLoF genes in the SQCCs 
    17 민병주 Summary for PBAC6 sequencing panel 
    17 안선주 Rarepedia: rare variants & gene wiki 
    19 서명의 WES to detect abnormalities causing Yutopar side effects in pregnant women 
    19 박지혜 Calculating weighted drug score using pharmacokinetic parameter 
    24 김주연 Preemptive genotyping for prevention of drug-related adverse events 
    24 백수연 Case study of identified adverse drug reaction associated gene with personal genome sequence 
    26 김현대 Distributed CCR converter 
    26 김혜현 Statistic result of CMO mapping to SNUH clinical document 

    2014-10:
    01 류영재 Identifying the effect of a variant within transporter to drug efficacy 
    01 이계화 Identifying genes associated with chemotherapy response using TCGA data 
    06 엄세인 Phenotype-based gene prioritization 
    06 임영균 Identifying potential synthetic lethal genes  
    08 민병주 Performance comparison between low coverage semiconductor sequencing and aCGH to analyze copy number variation 
    08 임재현 Characteristics of genes that frequently perturbed by variants in human protein-coding genes 
    13 안선주 Annotation Strategy using ClinVar (1) 
    13 서명의 NGS panel for Busulfan, COPD, 6MP, ADME Core and pharmacogenomic variants 
    15 박지혜 Calculating weighted drug score using pharmacokinetic parameters 
    15 백수연 Case study of identified adverse drug reaction associated gene with personal genome sequence 
    20 김주연 Preemptive genotyping for prevention of drug-related adverse events 
    20 김현대 Overview of the CCR converter  
    22 김혜현 Overview of CMO with its statistics 
    22 이우승 Replication plan: Genome-wide analysis of noncoding regulatory mutations in cancer 
    27 이수현 Statin data extraction and preprocessing result 
    27 임영균 Identificiation of potential synthetic lethal genes with survival analysis 
    29 박유미 AA(aplastic anaemia), Eos(eosinophilia), and HS(Hereditary spherocytosis) Data preprocessing 
    29 서희원 Distribution characteristics of LoF Mutations in 1000G and Gene Score with LoF Mutations 

    2014-09:
    01 안선주  
    01 김주연 IODINE: prescriber & patient-accessible health information platform 
    03 박지혜 Enzyme Kinetic data integration (drug-gene pairs with Km, Vmax and Kcat) 
    03 백수연 Identified adverse drug reaction associated gene with personal genome sequence - busulfan case 
    15 김현대 General CCR+ convertor 
    15 김혜현 Mapping result of CDO classes with UMLS 
    17 박유미 Comparing the distribution of CADD score to that of SIFT score 
    17 이수연S A new boosting algorithm using biological knowledge for improved personal genome sequence analysis for the & 
    22 김형준 BioEMR report with additional functionality system 
    22 서희원 WXS analysis of 6-mercaptopurine related neutropenia cases from ALL 
    24 이우승 Thyroid data analysis using cluster method and different gene set 
    24 이수현 101 drug analysis result using Meta CLEAR and Meta Nurse algorithm 
    29 김기태 Dys-regulation of the Wnt pathway in the squamous cell carcinoma 
    29 임영균 Identification of potential synthetic lethal genes  

    2014-08:
    04 박유미 Alzheimers Disease Sequencing Project :Data Statistics and description 
    04 임영균 Identification of potential synthetic lethals gene using mutation and clinical data in TCGA  
    06 서희원 Introduction to Complete Genomics Sequencing Data and CGATools 
    06 김혜현 Practical examples of extended relationships of DEs in CCR  
    11 이우승 Statistic Anaylysis to find Differentially Expressed Genes 
    11 이계화 Research Topics in Pink Avatar 
    13 임재현 Genomic perturbation on 1000 genomes population  
    13 이수연S A new boosting algorithm using biological knowledge for improved personal genome sequence analysis for the personalized prevention of ADRs(PharmSafe) 
    18 고인석 Validation Progress of RxNorm Mapping Algorithm 
    18 김기태 Mutation spectrum graph and Discussion in the SQCCs research 
    20 민병주 A recurrent Gly134Arg substitution in coagulation Factor X 
    20 서명의 Modified targeted cancer panel 

    2014-07:
    02 김현대 Current status of operating dialysisNet: data audit and logging  
    02 김혜현 Practical usage of extended relationships of DEs in CCR  
    07 박유미 Gene Scoring scheme revision using CADD score 
    07 이수연S A new boosting algorithm using biological knowledge for improved personal genome sequence analysis for the personalized prevention of ADRs(PharmSafe)  
    09 이우승 Replication of Reactive Oxygen Species Related Gene Expression differences between Thyroid carcinoma with & with out Hashimoto Thyroiditis&Normal 
    09 서희원 Systematic identification of relationship between marker SNP and cancer susceptibility gene 
    14 이계화 Exome Sequencing Annotation Pipeline 
    14 임재현 Damaging variant’s effect on gene expression  
    16 임영균 Identification of potential synthetic lethals gene using mutation and clinical data in TCGA  
    16 고인석 Development of Web Application for Mapping Drugs in Prescription with RxNorm 
    21 김현대 general ccr+ convertor 
    21 민병주 DNA Methylation Analysis using Ion Proton 
    23 서명의 Design targeted cancer panel using ampliseq method 
    23 박지혜 Calculating Weighted Drug score with Kinetic Parameter 
    28 안선주 Trim24 project: with Mixed ANOVA (2) 
    28 김주연 Preemptive genotyping for prevention of drug-related adverse events 
    30 백수연 Summary of pharmacogenomic information about busulfan 
    30 김기태 Dysregulation of Wnt pathway in the HNSC and LUSC  

    2014-06:
    02 백수연 Case study of identified adverse drug reaction associated gene with personal genome sequence 
    02 김현대 Visualization of Laboratory test result 
    04 김혜현 Variable DE in CCR+ for representing Lab with LOINC 
    04 박유미 Implicating sequence variants in human disease using genome sequencing data 
    09 이수연S A new boosting algorithm using biological knowledge for improved personal genome sequence analysis for the personalized prevention of ADRs(PharmSafe)  
    09 이계화 Global pattern of Pharmaceutical Market Withdrawal 
    11 임영균 Identification of potential synthetic lethals gene using mutation and clinical data in TCGA  
    11 이우승 Reactive Oxygen Species Related Gene Expression differences between Thyroid carcinoma with & with out Hashimoto Thyroiditis 
    16 임재현 Damaging variant’s effect on gene expression  
    16 서희원 Ion AmpliSeq off-target regions and their characteristics 
    18 고인석 Development Plan of Web Application for Mapping Drugs in Prescription with RxNorm 
    18 김기태 Survival analysis and Validation of the Mutated Wnt pathway genes in the SQCCs 
    23 민병주 Experimental modification for bisulfite sequencing using Ion Proton 
    23 안선주 Trim24 project: with Mixed Anova 
    25 서명의 Targeted cancer panel to analysis multiple types of mutation 
    25 박지혜 Calculating Weighted Drug score with Kinetic Parameter  
    30 김주연 Preemptive genotyping for prevention of drug-related adverse events 
    30 백수연 Validation of identified adverse drug reaction 

    2014-05:
    07 이수연S Pharmsafe algorithm accuracy boosting using genomic feature and biological knowledge  
    07 이우승 Replication of Synthetic lethality and further research in Ovarian Serous Cystadenocarcinoma 
    12 김현대 DialysisNET(1차병원) & 혈액검사 data description  
    12 김혜현 Complex CCR+ 
    14 이계화 Exome sequencing analysis pipeline review 
    14 임재현 Damaging variant effect on cis-gene expression  
    19 임영균 Survival analysis with cox proportional hazard model and permutation 
    19 고인석 Mapping results of single ingredient drugs(100 sample) with UMLS(RxNorm) 
    21 김기태 Strategy of the mutation profile analysis in SQCCs 
    21 민병주 Unmapped regions in Ampliseq exome sequencing 
    26 안선주 RNA-seq collaborations: Trim24 project/ TCGA thyroid cancer 
    26 서명의 Experimental modification of Ampliseq sequencing 
    28 박지혜 Calculating Weighted Drug Score with Kinetic Parameter 
    28 김주연 Identifying the need of prospective genotyping 

    2014-04:
    02 백수연 Constructing pharmacodynamic sub-module to find ADR outbreak mechanism 
    02 김혜현 Comparison lifelong term mapping rate in SNOMED-CT and MELLO 
    07 이수연S Pharmsafe algorithm accuracy boosting using genomic feature and biological knowledge  
    07 서희원 TCGA Protected Mutation Statistics and Validity 
    09 이수현 CLEAR, CLEAR modify algorithm analysis result using nursing data and lab data - Reference standard summary 
    09 이계화 Pharmaceutical Market Withdrawal and Genetic Variability of Personal Genomes 
    14 임재현 Effect of damaging variant on gene expression with respect to genotype  
    14 임영균 Identification of potential synthetic lethal genes in 12 tumor types 
    16 고인석 Entity Relationship diagram of KPIS database 
    16 김기태 Mutation profile analysis in SQCCs 
    21 안선주 Trim24 project: RNA-seq Transformation & Normalization Issue 
    21 서명의 DNA quality and NGS library preparation 
    23 박지혜 Calculating Weighted Drug score with Kinetic Parameter  
    23 민병주 Identification of maternal inherited causes of high functioning neuropsychiatric disorders 
    28 김주연 Finding genomic factors that regulate drug efficacy 
    28 백수연 Identify ADR causal gene with personal genomic variant profile 
    30 서희원 Rapid and Accurate Semiconductor-based Sequencing of Whole Exome 
    30 박유미 Comparison of variant calling algorithms for whole genome sequencing data  

    2014-03:
    03 서명의 Whole exome sequencing by using Ion Proton 
    03 안선주 Trim24 project - Differentially Expressed Gene list by edgeR 
    05 민병주 Experimental applications to validate cancer related genes 
    05 박지혜 Calculating Weighted Drug score with Kinetic Parameter 
    10 백수연 Research for find out mechanism of ADR outbreak 
    10 김혜현 MELLO based convertor for representing lifelog terms 
    12 이수연S SIFT & 1000 genome variant intersection calculation and Pharmsafe algorithm accuracy boosting using genomic feature and biological knowledge  
    12 서희원 A diagram for genetic architecture of disease and its susceptibility 
    17 이수현 Research issues and additional analysis plan 
    17 이계화 Drug Market Withdrawal Rate among OCED nations 
    19 임재현 Allele specific regulation for variant gene expression 
    19 임영균 Identification potential synthetic lethal genes in cancer / CADD review 
    24 고인석 Algorithm for mapping single ingredient drugs in prescription with RxNorm 
    24 김기태 Mutation profile analysis of Squamous cell carcinoma in TCGA 
    26 민병주 Identification of causes of neuropsychiatric disorders by using genomic data 
    26 박지혜 Calculating Weighted Drug score with Kinetic Parameter 
    31 안선주 Trim24 project: Data normalization and DE Test 
    31 서명의 Whole exome sequencing by using Ampliseq system 

    2014-02:
    03 서명의 Targeted sequencing system 
    03 박지혜 Calculating Weighted Drug score - Kinetic parameter data integration 
    05 백수연 Research scheme for find out mechanism of ADR outbreak 
    05 김혜현 Design for medical data sharing among multiple institutes with CCR  
    10 이수연S Pharmsafe algorithm accuracy boosting using genomic feature and biological knowledge  
    10 서희원 Association Study: Cancer Risk Alleles from GWAS and Rare Mutations 
    12 이수현 Study design for CLEAR_Orig, CLEAR_Modi, CLEAR_Nurs using nursing data and lab data. 
    12 이계화 Regional Drug Withdrawal -UN list Analysis 
    17 임재현 Haplotype phasing for 1000genomes data 
    17 임영균 Identification of synthetic lethal genes in 12 major cancer types  
    19 고인석 Ingredient mapping with RxNorm 
    19 김기태 Mutation analysis in TCGA 

    2014-01:
    06 민병주 Rapid targeted sequencing using the ampliseq technology 
    06 안선주 chmp5 project: GSEA 
    08 서명의 Targeted sequencing using the target enrichment system 
    08 박지혜 Weighted drug score with kinetic parameter - Enzyme kinetic Database 
    13 백수연 PharmSafe algorithm considering individual genotype & ADR research scheme 
    13 김혜현 Plan for MELLO Converter 
    15 이수연S Pharmsafe algorithm accuracy boosting using genomic feature and biological knowledge  
    15 서희원 Identify Inherited Rare-Risk Mutations for Hereditary Cancers 
    20 이수현 Comparative analysis of CLEAR algorithm in detection of adverse drug reactions 
    20 이계화 Pharmaceutical Market Withdrawal in Korea 
    22 임재현 1000 Transcriptomes - PCA  
    22 임영균 Synthetic Lethality Analysis in TCGA BRCA somatic mutation data  
    27 고인석 Ingredient column extension 
    27 김기태 Mutation analysis in TCGA datas (Replication) 
    29 민병주 Properties and rates of germline mutations in humans 
    29 안선주 RNAseq with Cornell: Trim24 project - Study Process Report 

    2013-12:
    02 임재현 1000 Genomes RNA-seq raw data download  
    02 김기태 Relative risk of Type2diabete in kare data 
    04 고인석 Web parsing solutions on KPIS web site 
    04 임영균 Synthetic Lethality Analysis of BRCA  
    09 민병주 Methylated region detection by using WGBS & TBS 
    09 안선주 chmp5 project: RNASeq with Cornell 
    11 서명의 PD-AMSCs RNA sequencing 
    11 박지혜 Calculating the weighted drug score using drug-enzyme kinetic parameter - Enzyme Kinetic Database  
    16 김혜현 Preliminary outcome of MELLO with search function 
    16 서희원 Web-based Analysis System for Associations between genotypes and gene scores  
    18 이수현 Comparative analysis of CLEAR algorithm in detection of adverse drug reactions 
    18 임재현 1000 Genomes RNA-Seq : Read Alignment and Read Quantification 
    23 이계화 EMR based research : PheWAS review 
    23 임영균 Synthetic Lethality Analysis of BRCA  
    30 고인석 KPIS Data Analysis and Database Creation 
    30 김기태 Mutation analysis in TCGA datas  

    2013-11:
    04 고인석 XML creation for prescription 
    04 김기태 Relative risk of diseases in kare data 
    06 민병주 CNV Detection by using aCGH method 
    06 서명의 rRNA Depletion and library prep for RNA sequencing 
    18 안선주 Chmp5 project: RNAseq with Cornell 
    18 박지혜 Calculating the weighted drug score using drug-enzyme kinetic parameter 
    20 백수연 Personal ADR risk ranking based on genome sequencing 
    20 김혜현 Preliminary outcome of MELLO with completion of gathering synonyms and definitions 
    25 이수연S Pharmsafe algorithm accuracy boosting using genomic feature and biological knowledge  
    25 서희원 Gene Scoring Methods Comparison 
    27 이수현 ADR analysis result using nursing data and lab data : 14 drugs& 
    27 이계화 Pharmaceutical market withdrawal prediction through personal genomic sequence variation 

    2013-10:
    07 안선주 Clinical Cancer Genomics  
    07 고인석 Sample of prescription encoding 
    14 민병주 Experimental approach for the diagnosis of mendelian disorders 
    14 박지혜 Correlation between rare variants and Loss of function variants 
    16 임영균 SNPChase: correcting errors from diverse literatures and SNV databases  
    16 서명의 RNA sequencing by using Ion Proton  
    21 백수연 Drug database for personal genome interpretation 
    21 이수연S PharmSafe web system flow & Androgenetic Alopecia risk calculation 
    23 김혜현 Assembled lifelog data structure based on MELLO 
    23 서희원 Synonymous and nonsynonymous variants SIFT score and gene scoring method 
    28 이수현 Early detection of pharmacovigilance signals using controlled vocabularies- Ampotericin & Methotrexate result 
    28 이계화 Drug Divide 
    30 임재현 1000 genome RNA-seq data : preprocessing  
    30 임영균 TCGA germline mutation data : summary 

    2013-09:
    02 이수현 aripiprazo​le data preprocessing summary 
    02 이계화 SIFT Score and Drug Market withdrawals 
    04 김혜현 MEDINFO2013 Review 
    04 임영균 SNPChase: correcting errors from diverse literatures and SNV databases 
    09 고인석 International standard codes for medicine and medical supplies 
    09 김기태 Relation of germline mutation and cancer 
    11 민병주 Predicting non-coding RNAs using RNA sequencing 
    11 서명의 Ion Proton training sequencing 
    16 이수연S preprocessing package of RCARE 
    16 김혜현 CCR/CCD/CCDA? What is our choice? 
    23 백수연 Circularity problem in PharmRank validation 
    23 서희원 Damaged Gene and Exon Scores for 1000 Genomes Project  
    25 이수현 ADR analysis result and figure using ampotericin, methotrexate  
    25 이계화 Ethnicity and Adverse Drug Reactions  
    30 임재현 Genomic Perturbation Network  
    30 김기태 Relation of germline mutation and cancer 

    2013-08:
    05 임재현 Characterization of Drug Perturbation Network 
    05 박이영 Cancer Genome Analysis 
    07 민병주 Expanding the phenotypic and molecular spectrum of desbuquois dysplasia Kim variant 
    07 서명의 Genotyping using multiplexing fragment analysis method 
    12 Intern Metabolic Syndrome: GWAS 
    12 Intern Metabolic Syndrome: GWAS 
    14 김기태 Identifying disease variant in genotypic association  
    14 고인석 HERON Research Data Repository 
    19 백수연 PharmRank case study - Warfarin 
    19 임재현 Yeast perturbation network - expression vs perturbation sensitivity 
    21 이수연S RNA-seq data pre-processing of RCARE  
    21 서희원 The Distribution of Somatic Mutations in POLE and POLD1. 
    26 unknown GDA 
    26 unknown GDA 
    28 unknown GDA 
    28 unknown GDA 

    2013-07:
    01 이수연S Personal phenotype ranking algorithm based on genomic variation 
    01 서희원 Bladder Cancer Cell Lines: Four Whole-Exome Sequencing Data Analysis 
    03 이수현 Analysis of adverse drug reaction using nursing data and lab data_Accuracy of prediction issues 
    03 이계화 Row Data Preview of KNHANES 1998-2011 
    08 임재현 Genomic characterization of drug perturbation sensitivity 
    08 Intern TP53 mutation in squamous-cell carcinoma of the lung 
    10 임영균 SNPChase: correcting errors from diverse literatures and SNV databases 
    10 박이영 Genetic modeling: application to real data 
    15 고인석 A method for encoding prescription contents with RxNorm 
    15 Intern Metabolic- Syndrome : A Genome Wide Association Study 
    17 김기태 Identifying disease variant in genotypic association 
    17 민병주 Clinical Consequences in Truncating Mutations in Exon 34 of NOTCH2 
    22 이수현 aripiprazole data summary and progress 
    22 백수연 PharmRank : Validation result of drug rank using PPI information 
    24 김혜현 MELLO based lifelog data model 
    24 이수연S PhenoRanker: Personal genome sequence based phenotype ranking algorithm for potential risk prediction  
    29 서명의 CpG island analysis for MALT lymphoma 
    29 서희원 In silico Synthetic Lethality Analysis of Endometrioid Endometrial Adenocarcinoma 
    31 이계화 KNHANE data analysis result 
    31 임영균 SNPChase: correcting errors from diverse literatures and SNV databases 

    2013-06:
    03 백수연 Apply drug ranking to 8 SNUBI individual’s genome sequence 
    03 김혜현 The Form Builder in CDISC Transformer 
    05 이수연S Personal phenotype ranking algorithm based on genomic variation& 
    05 정용 Functional Characterization of Yeast DNA Motif Clusters: 정리 방향 
    10 이계화 Clustering analysis result of biomarker of aging 
    10 임영균 SNPChase: correcting errors from diverse SNV databases for SNVs  
    12 이수현 Analysis result of Ampotericin using nursing data, lab data and considerations.  
    12 임재현 TRAPI : Data driven analysis of splicing events for mRNA-sequencing 
    17 서희원 Nine Bladder Cancer Cell Lines and its Chemo-resistance Profiles. 
    17 고인석 Analysis of current status of BMESH Browser and future works 
    19 박이영 Complex genetic models 
    19 김기태 Identifying disease variants in genotypic association 
    24 민병주 An interstitial, apparently-balanced chromosomal insertion in the etiology of Langer-Giedion syndrome in a Korea family 
    24 서명의 Chromosomal rearrangement analysis of bone abnormality with CNP overexpression 
    26 백수연 Case study of drug rank in 14 1000Genome ethnic population and plan for PharmRank2 
    26 김혜현 MELLO: MEDICAL LIFELOG ONTOLOGY  

    2013-05:
    01 박이영 Genetic modeling: gene-environment interaction 
    01 김기태 Identifying disease variants in genotypic association 
    06 백수연 Personal drug ranking algorithm based on genomic variation 
    06 민병주 Genomic analysis of Spondyloepimetaphyseal Dysplasia with Joint Laxity to identify the gene containing the causal mutations 
    08 서명의 Genomic analysis of Retinitis Pigmentosa by using targeted exome capture sequencing 
    08 김혜현 Demonstration of the CDISC Transformer (SDTM Transformer) 
    13 이수연S Personal phenotype ranking prediction based on genomic variation 
    13 서희원 Bladder Cancer Cell Lines: Nine RNA-Sequencing Data Processing 
    15 이수현 Preliminary result of Amphotericin case and overall analysis strategy  
    15 정용 Comparison between motif-centric and gene-centric method for Yeast DNA motif cluster functional annotation 
    20 이계화 Clustering of age-related change of Biomarkers 
    20 임재현 COPD subgrouping and more 
    22 임영균 SNPChase: correcting errors from diverse SNV databases for SNVs 
    22 고인석 Review of A National Metadata Repository for Empirical Research in Germany 
    27 김기태 Identifying disease variants in genotypic association 
    27 박이영 MCMC optimization 
    29 민병주 An interstitial, apparently-balanced chromosomal insertion in the etiology of Langer-Giedion syndrome in a Korea family 
    29 서명의 Chromosomal rearrangement analysis of bone abnormality with CNP overexpression 

    2013-04:
    01 이수연S SNP prioritization 
    01 이수현 Flow of study population selection and preliminary analysis result using standard nursing statement, lab test 
    03 정용 한국인 유전율 및 유전체 정보 제공 시스템 개발 계획  
    03 이계화 Biomarker of aging  
    08 임재현 COPD Gene prioritization    
    08 임영균 Plan for analyzing methylation & expression data in TCGA 
    10 고인석 UMLS Search Browser V1.3 
    10 박이영 Genetic modeling 
    15 임재현 COPD Subgrouping  
    15 백수연 Medappllo : Drug ranking forecast algorithm based on personal genomic variation 
    17 김혜현 Demonstration of the CDISC Transformer (ODM Transformer) 
    17 이수연S PRAGEN : personal Phenotype Ranking Algorithm based on GENomic variation 
    22 정용 Functional Characterization of Yeast DNA Motif Cluster: Further analysis 
    22 이수현 Comparison of Pooling and meta analysis 
    24 임영균 Review previous studies for methylation-expression relationship 
    24 이계화 Searching for Some Pattern of Aging  
    29 서희원 RNA-seq Analysis: Bladder Cancer Cell Lines 
    29 고인석 Search result in UMLS Browser 

    2013-03:
    04 백수연 MedCassandra - validation result of drug rank 
    04 김혜현 Life-log data in CCR : Issue of handling sensor data stream 
    06 이수연S RCARE a Tool for Comparison and Annotation of RNA-editing Sites using RNA-seq Data 
    06 서희원 Preprocessing of COPD miRNA Sequencing Data 
    13 이수현 Distribution of study population and pilot test result using standard nursing statement 
    13 정용 Other known motifs occupancy and conservation score patterns according to TFBS/motifs proportions in each motif cluster 
    18 이계화 Biological Age analysis of healthy people 
    18 임재현 Gene prioritization plan for COPD RNA-Seq Data 
    20 임영균 Analyzing DNA methylation regulation in cancers 
    20 고인석 UMLS Search Browser V1.2 
    25 박이영 Genetic Architecture of Complex Diseases 
    25 백수연 MedCassandra - validation result of drug rank using PPI and pathway information 
    27 김혜현 MELLO: MEDICAL LIFELOG ONTOLOGY 
    27 서희원 Characterization of RNA-sequencing and challenges. 

    2013-02:
    04 이수현 Detection of Adverse Drug Reaction Signals Using Controlled Vocabularies_Comparison of the Standard Nursing Statement and Laboratory Test Ratio based on Observation Period. 
    04 정용 Functional Characterization of Yeast DNA Motif Clusters using Multiple Annotation Methods 
    25 이계화 Formal concept analysis and Lattice 
    25 임재현 Isoform Analysis using COPD RNA-seq data 
    27 Alexander Project Review 
    27 박유랑 CCR : Extended personal health record standard with semantic and syntactic compliance on the ASTM CCR.  

    2013-01:
    02 이수현 Comparison of the Nursing Narrative Ratio (CoNNR) algorithm 
    02 정용 Comparison among DNA Motif Cluster Functional Annotation Methods - the Final Stage 
    07 이계화 Review of 2012 mHealth summit  
    07 정제균 Testing miRNA-mRNA Association with Clinical Outcome 
    09 임재현 Pipeline for paired Whole Exome Sequence Data 
    09 손경아 Integrative analysis of association between gene expression and genomic features 
    14 Alexander GO homogeneity of disease genes    
    16 조용래  
    16 김도균 Knowledge bootstrapping: A graph-based integration with multi-omics data and genomic knowledge 
    21 Intern Interactions of miR-323/miR-326/miR-329 and miR-130a/miR-155/miR-210 as prognostic indicators for clinical outcome of glioblastoma patients.     
    21 Intern Interactions of miR-323/miR-326/miR-329 and miR-130a/miR-155/miR-210 as prognostic indicators for clinical outcome of glioblastoma patients.  
    23 정제균 Testing miRNA-mRNA Association with Clinical Outcome 
    23 윤준희 Plan for transplantation Genomancer to Healthavatar 
    28 백수연 MedCassandra : Drug ranking in Asian population 
    28 김혜현 Life-log data in CCR : Metadata driven lifelog classification 
    30 이수연S CARE a Tool for Comparison and Annotation of RNA-editing Sites from RNA-seq Data    
    30 서희원 COPD miRNA sequencing data 

    2012-12:
    03 이수현 Adverse Drug Reactions (ADRs) detection algorithm using Narrative Nursing Records& Plan for study in Ajou univ.  
    03 정용 Functional Annotation for Yeast DNA Motif Clusters with Three Methods 
    05 임재현 TRAPI : RPKM computation using ENCODE data  
    05 강병희  
    10 손경아 Chromatin state segmentation for modENCODE project  
    10 나영지 Predicting disease predisposition patterns of the personal genome 
    12 조용래 HealthPro improvements for clinical term search 
    12 Alexander Reducing edges in phenotype networks 
    17 임재현 plan for COPD Analysis  
    17 윤준희 Genomancer : Secure, modular and distributed system for interpreting personal genome in mobile smartphone environment 
    19 전체 대통령 선거 
    19 전체 대통령 선거  
    24 김도균 Graph- and kernel-based integrative analyses of multi-layers of heterogeneous genomic data (학위논문 보완사항) 
    24 백수연 Adjustment of ranking algorithm and Validation of ranking result 
    31 김혜현 Personalized Physiomics Data into CCR+ 
    31 이수연S CREE a Tool for Comparison and Retrieving of RNA-editing Sites from RNA-seq Data 

    2012-11:
    05 이수현 Drug Utilization Surveillance System (DUSS) 
    05 이계화 AML M2 paired sample analysis plan 
    07 임재현 COPD Clinical Data Analysis  
    07 강병희 A genome-wide genetic interactions map for breast cancer survival 
    12 손경아 Chromatin state segmentation using hiHMM - simulation study 
    12 Alexander Project Update 
    14 나영지 Predicting disease predisposition patterns of the personal genome based on disease hierarchy 
    14 서희원 Blood genotyping for pretransfusion testing. 
    19 조용래 HealthPro: Designing Search Strategies for Retrieving Data from Clinical Data Warehouse  
    19 윤준희 Demonstration of Genomancer 
    21 정제균 Topological properties of Disease-Drug Target Networks 
    21 김도균 Review on Postdoc Interview 
    26 백수연 Drug rank in each therapeutic category and Validation scheme 
    26 김혜현 Incorporating Personalized Physiomics Data into CCR Standard 
    28 이수연S Compare search performance GEO,AR to GEE  
    28 이계화 AML patients exome sequence Analysis Plan  

    2012-10:
    08 이계화 AML exome and cytoarraychip data analysis 
    08 임재현 TRAPI : Total RNA-seq Analysis Pipeline for Isoforms  
    10 강병희 discovering genetic interactions in breast cancer progression and treatment 
    10 손경아 Cross-species chromatin state segmentation using hiHMM 
    17 나영지 Predicting disease predisposition patterns from personal genome based on disease hierarchy 
    17 김도균 Comparison between kernel-based integration and graph-based integration 
    22 정제균 Disease-Disease Pairs Correlated by Damaging Variants  
    22 Alexander Project Overview 
    24 조용래 HealthPro: Designing Search Strategies for Retrieving Data from Clinical Data Warehouse 
    24 윤준희 Comparing tools and app in paper work of Genomancer  
    29 김혜현 CDISC ODM Convertor in CDISC Transformer 
    29 이수연S Web & App version GEE  
    31 서희원 RNA-seq analysis: Label miss matched, Differentially Expressed Isoforms. 
    31 백수연 1st result of drug and ADR rank in MedCassandra 

    2012-09:
    03 김혜현 Diabetes Management by Social Network 
    03 이계화 ReDocumentation Plan of CCR+ - Breast Cancer Survivor Treatment Summary 
    05 임재현 TRAPR : Total RNA-seq Analysis Package for R 
    05 강병희 discovering genetic interactions in breast cancer progression and treatment 
    10 손경아 Integrative effect of genomic features on gene expression traits 
    10 나영지 Predicting disease predisposition patterns from personal genome based on disease hierarchy 
    12 조용래 Extracting dosage from drug name and query performance 
    12 김도균 Graph-based integration with gene expression and genomic knowledge (Validation results) 
    17 정제균 Population-specificity of Damaging Variants in Diseases 
    17 윤준희  
    19 백수연 MedCassandra : Personalized ADR ranking forecast system based on personal genomic variation. 
    19 김혜현 CDISC Transformer: meta-data and CDASH driven semi-automatic transformation of eCRF to CDISC ODM and SDTM model 
    24 이수연S GEE : Gene Expression data Explore . 
    24 이수현 Drug surveillance based on observation medical dataset-OSIM Replication & approach  
    26 서희원 RNA-Seq Analysis: how to handle missing values?    
    26 정용 Functional enrichment test for motif clusters - Constructing tri-partite graph 

    2012-08:
    01 임재현 TRAPR : Total Rna-seq Analysis Package for R 
    01 김도균 Review on TCGA data 
    06 나영지 Predicting disease predisposition patterns of personal genome based on disease hierarchy 
    06 조용래 Development of gene-environment interaction database for personal genome interpretation 
    08 강병희 discovering genetic interactions in breast cancer progression and treatment 
    08 정제균 Association between diseases from human genomes  
    13 윤준희 Genomancer test version 
    13 서희원 RNA-seq analysis: day effect normalization & which FPKM value is suitable? 
    27 이수연S GEE : Gene Expression data Explore&  
    27 백수연 Drug Information Retrieval System (DIR) 
    29 정용 Functional Enrichment test for motif clusters - sequence clustering using distributed computing 
    29 이수현 Drug surveillance based on observation medical dataset.  

    2012-07:
    02 강병희 discovering genetic interactions in breast cancer progression and treatment 
    02 정용 Functional Annotation to Yeast DNA Motif Clusters: preliminary study 
    04 이계화 Personal Health Record for Cancer Survivor  
    04 임재현 TRAPR : Total Rna-seq Analysis Package for R  
    09 이수현 Dataset validation for ADRs analysis and suspected ADRs signal using lab data  
    09 조용래 Result of medication data parsing for HealthPro  
    16 나영지 Predicting disease predisposition patterns of personal genome based on disease hierarchy 
    16 김도균 Graph-based integration with heterogeneous genomic data and genomic knowledge 
    18 정제균 Disease Network Construction with Risk Variants 
    18 윤준희 Updated results of phenotypic drug-drug interaction network  
    23 백수연 MedCassandra – drug information integration for ADR ranking system 
    23 이수연S GEE : Gene Expression data Explore 
    25 이계화 Reorganizing the Cancer Treatment Summary using CCR  
    25 김혜현 Better Performance of CDISC Transformer as using CDASH 
    30 이수현 Rapid identification of adverse drug reaction using controlled vocabularies 
    30 서희원 RNA-seq reads alignment with Bowtie2. 

    2012-06:
    04 이수현 Dataset validation for ADRs analysis and nursing statements result 
    04 정용 Yeast DNA Motif Functional Annotation 
    11 이계화 Ready for Personalized Medicine? 
    11 임재현 Pipeline for RNAseq Analysis and scheme for R package 
    13 강병희 discovering genetic interactions in breast cancer progression and treatment 
    13 조용래 Result of medication data parsing for HealthPro 
    18 나영지 Predicting disease predisposition of personal genome based on disease hierarchy 
    18 윤준희 Network analysis for phenotypic drug-drug interaction 
    20 정제균 Network-based assessement of gene similarity measures 
    20 김도균 Graph-based integration with heterogeneous genomic data and genomic knowledge 
    25 백수연 MedCassandra : Personalized ADR ranking forecast system based on personal genomic variation 
    25 이수연S GEE : Gene Expression data Explore 
    27 김혜현 Improve matching rate of the CDISC Transformer with CDASH 
    27 서희원 Comparison of RNA data analysis results: Cuffdiff algorithm validation. 

    2012-05:
    02 백수연 Finding repositioning drug candidate among structure-based drug network 
    02 윤준희 Similarity fomula for Phenotypic Drug-Drug interaction and Genomancer design 
    07 김혜현 HealthAvatar Platform Scenario 
    07 서희원 Definition of LoF genes and find individual LoF genes. 
    09 이수현 Construction of medication dataset and ADR analysis scheme  
    09 박유랑 Medication spec. and ETL Processes 
    14 백수연 summary of chemical structure based drug repositioning & plan for expression profile based study 
    16 김도균 Integration with gene expression and TF relation 
    16 정제균 Allele frequency distribution of genetic diseases 
    21 조용래 Development of gene-environment interaction database for personal genome interpretation  
    21 윤준희 Results overview of phenotype similarity for drug-drug interaction 
    23 나영지 Predicting disease predisposition of personal genome based on disease hierarchy 
    23 김혜현 Diabetes management by intervention as health avatar scenario 
    30 이수연S GEE : Gene Expression data Explore 
    30 서희원 LoF variants and allele frequency from 1000 genome. 

    2012-04:
    02 김도균 Graph-based integration with heterogeneous genomic data and genomic knowledge 
    04 정제균 Association between diseases and risk variants in healthy genomes 
    04 윤준희 Naive statistic analysis 1000genome in Pharmacogenomics 
    09 나영지 Predicting the disease risks of personal genome based on disease hierarchy 
    09 백수연 Clustering and Sub-network analysis of drug structure network 
    16 이수연S GEE : Gene Expression data Explore 
    16 김혜현 Representation of ClinicalTrials.gov basic results data based on CDISC ADaM model 
    18 서희원 Loss of Function Gene-set Analysis Of Personal Genome Using Pathway-Disease Similarity. 
    18 이수현 Patients matching result of exposure group, non-exposure group and analysis preview 
    23 박유랑 Define medication specification and ETL rules  
    23 나영지 Predicting disease risks of personal genome based on disease hierarchy 
    25 조용래 Implementing Search Tool in integrating HealthWatch and BioEMR DB Schema 
    25 김도균 Graph-based integration with heterogeneous genomic data and genomic knowledge 
    30 정제균 Analysis of Allele Frequency in Human Genome 
    30 이수연S GEE : Gene Expression data Explore  

    2012-03:
    05 이수현 Analysis of Adverse Drug Reactions(ADRs) using controlled vocabularies_a cohort study design  
    05 나영지 Predicting the disease potential of personal genome based on disease hierarchy 
    05 이수현 Analysis of Adverse Drug Reactions(ADRs) using controlled vocabularies_a cohort study design  
    07 서희원 OMIM and Human Phenotype Ontology for Constructing Phenotypic Signature Map 
    07 조용래 Development of gene-environment interaction database for personal genome interpretation  
    12 권창혁 Basic analysis of P0 personal genome variants 
    12 박유랑 MDR based semantic consistent exchange on clinical document 
    14 김도균 Knowledge enhancement through intronic miRNAs and target gene information for clinical outcome prediction 
    14 정제균 Properties of disease-susceptibility variants shared between diseases  
    19 윤준희 Hapmap data processing for analysis in pharmacogenomics 
    19 백수연 Using chemical structure similarity for drug repositioning 
    21 이수연S make a web tool for searching microarray data set 
    21 서희원 From Variant to Human Phenotype Term Mapping Result with OMIM & HPO. 
    26 이수현 Study design and analysis preprocessing 
    26 김혜현 CDISC Transformer: meta-data driven semi-automatic transformation of eCRF to CDISC ODM and SDTM models 
    28 박유랑 CCR 프로젝트 진행 계획 및 시연 준비사항 
    28 조용래 Search for Clinical Trial Data in BioEMR 

    2012-02:
    01 이수현 Dataset construction of drug exposure group and non-exposure group  
    01 박유랑 Qualitative and Quantitative comparison of content constraint models  
    06 나영지 Predicting the disease potential of personal genome based on disease hierarchy 
    06 권창혁 1000 genome to Cosmic 
    08 조용래 Development of gene-environment interaction database for personal genome interpretation 
    08 김도균 Similarity measure using segmentation of copy number data 
    13 이수연 Prepare co-expression data using GEOquery package in R  
    13 정제균 Disease Network Construction with Risk Variants 
    14 Intern Central Carbohydrate Metabolic Reconstruction of Helicobacter pylori 26695 
    14 Intern A New Approach for Drug Repositioning Using Gene Sequence Databases Instead of Gene Expression Omnibus(GEO)  
    14 Intern Identification of Cholangiocarcinoma-like Hepatocellular carcinoma and discussion about microarray cell marker  
    15 윤준희 Pharmacogenomics in world 
    15 백수연 development of drug drug interaction monitoring agent 
    27 이수연S CREE a Tool for Comparison and Retrieving of RNA-editing Sites from Next Generation Sequencing Data 
    27 김혜현 Contents of BMeSH browser 

    2012-01:
    02 권창혁 1000 Genome Parsing 
    02 조용래 Implementing Search Tool for EAV Model of DB Schema in BioEMR 
    04 박유랑 MDR based clinical document exchange 
    04 이수연 miRNA-mRNA Pair-database : summarize by 4 categories 
    09 김도균 Segmentation of copy number data as an input for graph-based SSL 
    09 정제균 Disease Network Construction with NGS Data  
    11 윤준희 Finding Drug-Drug Interaction using Pharmacogenomic Phenotype 
    11 한현욱 next topics about network medicine 
    16 Intern A New Approach for Drug Repositioning Using Gene Sequence Databases Instead of Gene Expression Omnibus(GEO) 
    16 Intern Identification of heptocellular carcinoma-like Gene Expression Trait in Cholangicocarcinoma 
    18 백수연 [completion of replication] Discovery of drug mode of action and drug repositioning from transcriptional responses 
    18 이수연S Calculation Perturbation Sensitivity in Connectivity Map  
    30 김혜현 Representation of ClinicalTrials.gov basic results data based on CDISC AdaM model 
    30 서희원 Establishing phenotypic signatures to infer relevant phenotypic characteristics using semantic similarity calculation. 

    2011-12:
    08 이수연 miRNA-mRNA pair database fill out statistics 
    08 정제균 Disease Map Construction with Personal Genome  
    12 조용래 Implementing Search Tool for EAV Model of DB Schema in Clinical Trial Management System(BioEMR) 
    12 김도균 Integration genomic data and genomic knowledge for cancer clinical outcome prediction 
    14 윤준희 Summary of SNUBI pharmacogenomic test 
    14 윤선민 Interpreting personal genome variations using gene-disease-environment interaction network 
    19 이수연S Calculation Perturbation Sensitivity in Connectivity Map 
    19 윤선민 Interpreting personal genome variations using gene-disease-environment interaction network  
    21 백수연 drug network clustering and sub-network analysis 
    21 김혜현 Completion of the CDISC Transformer (1st phase) 
    26 한현욱 lethality, disease and drug-target genes in biological network 
    26 나영지 Disease scoring system based on sequencing data 
    28 이수현 Dataset distribution & Constructing exposure group and non exposure group  
    28 서희원 Construct bipartite gene-disease graph for measuring vertex(gene) centrality using R. 

    2011-11:
    02 이수현 Additional considerations of prior adverse drug reaction study design  
    02 박유랑 Method for measuring semantic interoperability  
    07 윤선민 Disease-gene-environment interaction network analysis  
    07 나영지 Discovery of relationships between diseases and pathways from detected variants in next-generation sequencing data 
    09 조용래 Result for implementing search tool in BioEMR 
    09 김도균 Integration genomic data and genomic knowledge for cancer clinical outcome prediction 
    14 정제균 Co-emergenece Measure of Multiple Disease Risks using Genome Variants 
    14 윤준희 Pharmacogenomic test using VAAST 
    16 백수연 pharmacology network construction using gene expression profile 
    16 이수연S Clinical risk incorporating genetic-risk estimates for breast cancer 
    21 한현욱 Disease & Drug Target in Biological Network  
    21 나영지 Discovery of disease risk patterns from next-generation sequencing data 
    23 윤선민 The construction of disease-gene-environment interaction network 
    23 서희원 Phenotypic signature using genomic variant annotation on semantic network. 
    28 이수현 Analysis of Adverse Drug Reactions(ADRs) using the international nomenclature 
    28 김혜현 New Design of CDISC Transformer with ODM and CDASH 
    30 박유랑 MDR based clinical document exchange (Schematron 기반 구현) 
    30 권창혁 Result Comparison of SNP Detection Tools  

    2011-10:
    05 백수연 Pharmacology network for drug repositioning 
    05 김혜현 CDISC Transformer with Web Interface 
    10 윤선민 The analysis of diseases-associated with etiological factors 
    10 서희원 Increased risk of fractures of the hip, wrist, and spine with the use of proton pump inhibitors 
    12 이수현 Signal detection of adverse drug reaction using standardized narrative statement on electronic nursing records 
    12 박유랑 MDR based clinical document exchange  
    17 나영지 Knowledge-based synergistic variant detection from NGS data 
    17 조용래 BioEMR Incoporating Searching function like Healthwatch 
    19 김도균 Integration genomic data and genomic knowledge for cancer clinical outcome prediction  
    19 정제균 co-emergenece of multiple diseases in genome 
    24 한현욱 Strategy for Visual Representation of Network in My Paper  
    24 이수연S Clinical risk incorporating genetic-risk estimates for breast cancer and research trends predicting disease risk  
    26 윤준희 Pharmacogenomics analysis for unmapped variants 
    26 백수연 Network construction strategy for drug repositioning 
    31 김혜현 CDISC Transformer UI & ADaM Plan  
    31 서희원 Sequence Analysis Pipeline Verification Strategy. 

    2011-09:
    05 한현욱 Strategy for writing Paper  
    05 이수연S iPhone Application version of Gene Expression data Explore 
    07 서희원 Browsing SNUBI Sequences - GBrowse VS. JBrowse. 
    07 김혜현 Conversion CDISC ODM model into SDTM model through CDISC Transformer 
    14 이수현 Insert paper extraction progress and review of study design  
    14 윤선민 The relationship of diseases by etiological factors to decipher human genome 
    19 이수연S Clinical risk incorporating genetic-risk estimates for breast cancer 
    19 나영지 Discovery and classification of pathways perturbed in disease state based on gene set approach using whole genome sequencing data 
    21 박유랑 MDR based semantic consistent exchange on clinical document 
    21 조용래 Pipeline for Genetic risk 
    26 김도균 Intra-relation Reconstruction from Inter-relation: miRNA to Gene Expression 
    26 정제균 Analysis of Sequence Motifs Associated with DNA Methylation 
    28 한현욱 Visualization of Merged Network  
    28 윤준희 Pharmacogenomics annotation test and scoring idea 

    2011-08:
    01 윤선민 The arrangement to extract environmental factors from PubMed articles 
    01 이수연S iPhone Application version of Gene Expression data Explore 
    03 Intern phylogenic tree Comparison Algorithm Use & Converting 
    03 Intern Sequence - based prediction of Huntingtons Disease  
    03 Intern [H.K.Han]Healthcare information protection and privacy    
    08 나영지 Gene set enrichment based on combinatorial variants 
    08 이수현 Study design for signal detection based on continuous nursing data 
    10 박유랑 Measuring semantic interoperability 
    10 조용래 Health Avatar API and Mapper Design 
    10 Intern [SummerInternship]DecodeME 
    17 이수연S Microarray Data Analysis    
    17 Intern Prediction of the trinucleotide repeat expansion disorders on the web page 
    17 Intern phylogenic tree Comparison Algorithm Use & Converting 
    22 나영지 Microarray Data Analysis    
    22 정희준 Microarray Data Analysis 
    22 김도균 GSEA and Survival analysis 
    23 나영지 NGS Data Analysis    
    23 박찬희 SNP and Indel Identification Variant Analysis and Annotation    
    23 이수연 RNA-seq Data Analysis    
    24 정희준 Sequence data analysis 
    24 박유랑 Pathway Analysis, Gene Ontology Analysis and Biological Text Mining  
    24 한현욱 Network Biology 
    25 박찬희 GWAS tutorial 
    25 김도균 CNV Data Analysis 
    25 김도균 SNP database 
    26 한현욱 Metagenome Analysis  
    26 나영지 Epigenome DATABASE and Tools 
    26 정제균 Epigenome Data Analysis    
    26 나영지 R Introduction 
    31 서희원 Genome Browser - Browsing SNUBI Sequences. 
    31 정제균 Motif Analysis in DNA Methylation 

    2011-07:
    04 김도균 Network Biology & Medicine 팀 발표 
    06 박유랑 Health Avatars 
    11 정제균 Sequence Informatics for Genome and Epigenome 
    13 윤선민 Design study of disease-etiological factor associations 
    13 이수현 Progress of ADR signal detection using standardized nursing statement study  
    18 나영지 Understanding cooperativity of microRNAs using microRNA association network 
    18 박유랑 MDR based clinical document exchange -openEHR archetype & HL7 Template 
    20 조용래 Health Avatar API 
    20 김도균 Graph reconstruction from inter-relationship information between miRNA and gene expression 
    25 한현욱 Robustness and Disease in Biological Network 
    25 김혜현 CDISC Transformer for converting ODM with CDASH 
    27 정제균 Functional Association of Co-methylated Genes in Gene Expression 
    27 김도균 Graph and kernel-based integrative analyses of multi-layers of heterogeneous genomic data 

    2011-06:
    01 김혜현 Data interoperability between SDTM model and ODM model in CDISC Transformer 
    01 윤선민 Association between disease and etiological factors for personal genome decipher 
    08 서희원 Fracture Risk Associated with Proton Pump Inhibitors 
    08 이수현 standardized nursing record mapping with WHO-ART for ADR detection  
    13 나영지 Identification of disease-specific pathways applying gene set enrichment analysis to variants from next-generation sequencing data 
    13 이수연 MicroRNA 기능 분석을 위한 miRNA-mRNA 쌍의 관계 속성 데이터베이스 및 분석방법론 개발 
    15 조용래 LANCET Replication Progress 
    15 박유랑 MDR based clinical document exchange -HL7 Template implementation- 
    20 이수연 MicroRNA 기능 분석을 위한 microRNA-mRNA 쌍의 관계 속성 데이터베이스 및 분석방법론 개발 
    20 김도균 How to measure inter-relationship between different layers of genomic data? [Progress in miRNA-gene expression data]  
    22 한현욱 Mathematical Model & Layouts for network visualization  
    22 정제균 Functional Correlation between Co-methylated and Co-expressed Gene Pairs  
    27 이수연S recover plan of GEE 
    27 김혜현 BMeSH Web Design Structure 
    29 김지훈 Personal Genome Deciphers team progress report  

    2011-05:
    02 이수연 Construction of miRNA-mRNA pair database 
    02 김도균 How to measure inter-relationship between different layers of genomic data? [Progress in miRNA-gene expression data] 
    04 정제균 Comparison of Correlation Measurements between Genes in DNA Methylation and Gene Expression 
    04 한현욱 power-law distribution & fitness effect 
    09 이수연S GEO value mapping using MESH and eVOC 
    09 김혜현 CDISC Transformer progress and ODM overview 
    11 윤선민 The expanded research concept for comparison of Metabolic pathways and Non-metabolic pathways 
    11 서희원 Gene-set wise approach for disease susceptibility using SNP profiles. 
    16 이수현 Analysis of standardized nursing record category and WHO-ART category  
    16 나영지 AnsNGS Interpreting the Personal Human Genome Sequencing Data 
    18 박유랑 MDR based clinical document exchange  
    18 송영수 Multistep Carcinogenesis and Genomic Distance 
    23 조용래 Calculating Disease Risk and HeRACreS 
    23 김도균 How to measure inter-relationship between different layers of genomic data? [Progress in miRNA-gene expression data]  
    25 이수연 Construct miRNA-mRNA pair database - add co-expressed data set 
    25 정제균 Prioritization of Candidate Loci from Whole-genome DNA Methylation  
    30 한현욱 Multiple Regression Analysis of Networks 
    30 이수연S RNA-seq data processing and analysis 

    2011-04:
    04 박유랑 Gene product overlap in GO annotation 
    04 송영수 GO Term-Guided Genomic Distance between Two Individuals 
    06 조용래 Replication Report to Phenome-Genome Network of Atul paper. 
    06 이수연 miRNA-mRNA pair database design 
    11 한현욱 Perturbation network : Insight of Biological Robustness  
    11 김도균 How to measure inter-relationship between sample features belonging to different layers of genomic data? 
    13 김혜현 Subsumption test progress in CDISC transformer  
    13 정제균 Measurement of Correlation between Genes in DNA Methylation and Gene Expression 
    18 이수연S make a web tool for searching microarray data set  
    18 나영지 AnsNGS Annotation Strategies for Interpreting the Personal Human Genome Sequencing Data 
    20 서희원 Finding Relationships Between Disease and Gene-set. 
    20 이수현 Comparison of Clinical characteristics between rosiglitazone subgroups and FDR(False discovery rate) result.  
    25 송영수 Correlation between Tumor Progression and Cancer-to-Normal Genomic Distance 
    25 윤선민 Analysis to show the difference between metabolic and non-metabolic pathways 
    27 조용래 caGRID Localization 
    27 박유랑 MDR based clinical document exchange  

    2011-03:
    02 윤선민 Pathway Analysis by properties of networks  
    02 서희원 Contribution of Genomic Variants to Human Phenotypes in Functional Genomics 
    07 나영지 Identifying miRNA modules from miRNA-mRNA coexpression data 
    07 이수현 Distribution of standardized nursing statement as ADR signal in Rosiglitazone group  
    09 박유랑 Achieving semantic interoperability in clinical and biomedical domain based on an international metadata description and registration standard  
    09 송영수 Development of Measurement of Genomic Similarity between Human Individuals 
    14 조용래 A scenario using TCGA data on Health Avatar Platform 
    14 김지훈 To improve the semantic signature work 
    16 이수연 To analysis co-transcriptomics data using miRNA-mRNA pairing database 
    16 정제균 Identification of copuled genes in DNA methylation and gene expression  
    21 김도균 Review on the submitted paper to ISMB 2011 
    21 한현욱 Protein-Protein Interaction network vs. Perturbation Network 
    23 김혜현 Subsumption test result and Method for searching attributes in CDISC Transformer 
    23 윤선민 Data analysis and relation of PPI and DDI among KEGG pathways 
    28 이수연S Plan of microarray browsing search tool 
    28 서희원 A Gene-set Based Approach to Link Genes to Diseases. 
    30 이수현 Computerized surveillance method for adverse drug event using standardized nursing record  
    30 나영지 Validation of miRNA modules in terms of functional similarity 

    2011-02:
    07 한현욱 Analysis of PPI & DDI in MIPS dataset 
    07 이수연S Keyword search for Microarray data using evoc term as stemming 
    09 김혜현 CDISC Project Plan in 2nd year focusing ADaM 
    09 윤선민 Protein domain compositions in biological networks 
    14 이수현 Distribution of standardized nursing statement sets in diabetes medications  
    14 나영지 miRNA function prediction based on structure similarity 
    16 박유랑 Metadata distance network by semantic similarity 
    16 송영수 B & T Cell Metagenomics and Clinical Applications 
    21 이수연 Relationship btw co-transcriptomics data and target genes 
    21 김도균 Plan for integration with inter-relationship between sample features belonging to different layers of genomic data 
    23 정제균 Corrlation Pattern Analysis of Gene in Epigenome Data (Plan) 
    23 이수연S Make conversion rules for SOFT to MAGE-TAB 
    28 한현욱 Relationship between Perturbation Network & Protein-Protein Interaction Network 
    28 김혜현 Subsumption test progress and plan 

    2011-01:
    03 박유랑 Development of semantic similarity based metadata distance measure 
    03 송영수 Immunoglobulin Gene Rearrangement: A Useful Marker in Personalized Medecine? 
    05 이수연 Database of miRNA-mRNA pairs 
    05 정희준 Contents for AXP 
    10 Rocky Computational prediction of target SNPs affecting miR-mRNA interaction  
    12 한현욱 Perturbation Sensitivity of genes, Beyound Tinkering 
    12 이수연S construct of vocabulary using evoc term for Keyword search in Microarray data  
    17 윤선민 Domain-Domain interactions in KEGG pathways 
    19 이수현 ADR signal detection using standardized nursing statement 
    19 나영지 Relationship between structure and function of miRNAs 
    24 박유랑 CCR Network for Exchange and sharing  
    24 송영수 T cell receptor (TCR) clonotyping and autoimmune disease 
    26 이수연 miRNA-mRNA pairing relationship ? genomic locations and co-transcriptomics data set 
    26 정희준 Contents and introduction 
    31 정희준 Contents  
    31 Intern [Eun Hee Rah] Constructing graph and phylogeny tree by using protein sequences  
    31 Intern [Soo Min Han] Pharmacogenetic-guided Dosage Regimen Program for Warfarin 

    2010-12:
    01 이수현 Data extract process and distribution of dataset  
    01 나영지 Structure-based miRNA function prediction 
    08 박유랑 Semantic similarity based metadata clustering 
    08 송영수 Sequencing of B cell Population in Mammalian Blood or Lymph Node 
    15 이수연 Extract miRNA-mRNA pairs from gene2pubmed and compare with miRSel 
    15 정희준 Interpretation of high-throughput genomic data using integrated biological pathway resources and biomedical knowledge 
    20 Rocky Computational prediction of target SNPs affecting miR-mRNA interaction  
    20 박찬희 Manuscript progress 
    22 한현욱 More thinking on Perturbation Sensitivity of genes 
    22 이수연S construct of vocabulary using evoc term for Keyword search in Microarray data  
    27 김혜현 CDISC Transformer interface & its working progress 
    27 윤선민 Protein/ Domain interactions 
    29 이수현 Detection of adverse drug reaction using the nurse information 
    29 나영지 Structure-based miRNA function prediction 

    2010-11:
    03 강기원 Detection of acute adverse drug reactions in clopidogrel through system using incidence density ratio(IDR) in electronic medical records  
    03 정희준 MetaPath: a pathway extension from gene lists using literature 
    10 Rocky A resource to prioritize the candidate SNPs in the study of disease association related to the SNPs on miR-mRNA interaction 
    10 박찬희 Select killer item on writing manuscript  
    17 한현욱 Analysis of genomic physical characterization on perturbation sensitivity of a gene 
    17 이수연S Keyword search for Microarray data using evoc term as stemming 
    24 윤선민 Pathway analysis of member genes for functional annotation 

    2010-10:
    06 김혜현 CDISC Transformer Structure 
    06 윤선민 Extension biological network of unknown gene using Protein structure information. 
    13 이수현 To Practice Data Extractions from Data Warehouse : the case of diabetes medications 
    13 나영지 microRNA function prediction using structure similarity 
    20 나영지 microRNA function prediction using structure similarity 
    20 박유랑 Metadata based value inference for integrating data from multiple studies 
    27 송영수 Extension of Xperanto-RDF to include survial analysis module 
    27 이수연 Extract miRNA-mRNA target pairs from literatures and co-transcriptomics data 

    2010-09:
    01 김혜현 CDISC Transformer- Mapping rule    
    01 송영수 Introduction to Hypothesis Ontology 
    08 이수연 Extract real miRNA targets from literatures 
    08 정희준 MetaPath: case study of GBM 
    15 Rocky Investigating SNPs residing in the MicroRNA-Binding Sites: Method of study 
    15 박찬희 Strategy on adding gene-mesh relationship in GRIPdb    
    29 한현욱 Analysis of genomic physical characterization on perturbation sensitivity of genes 
    29 이수연S plan for make a stemcell database using GEO data 

    2010-08:
    05 Rocky Investigating SNPs residing in the MicroRNA-Binding Sites progress 
    05 박찬희 GeneXrefDB in the aspect of Link Mining 
    12 한현욱 Analysis of physical properies on perturbation sensivity of gene(1) 
    12 이수연S compared with atlas of EBI and our plan 
    19 박유랑 Automatic classification of Metadata 
    19 윤선민 Study Pathways based on protein structural information. 
    26 이수현 Detection of adverse drug reaction using the nurse information : Method of study 
    26 나영지 miRNA function prediction based on structure similarity 

    2010-07:
    29 송영수 Clinical document ontology 
    29 정희준 MetaPath: an integrated pathway database enable to search biomedical context 

    2009-06:
    09 김도균 A framework for the integrative analysis of copy number and gene expression profile based on the summarized data sets 

    2009-05:
    12 강기원 Aging pattern cluster in human 

    2009-04:
    14 나영지 Characterizing microRNAs that govern condition-specific regulation using microRNA-mRNA coexpression    
    14 변상재 Correlation between Gene Expression and GO Semantic Similarity    

    2009-03:
    24 박찬희 GRIP ( Genome Research Informatics Pipeline ) Integrating biological resources for genome research    

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