SNUBI Research ::   (261 talks satisfying Presenter = 나영지)
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2013-02:
05 나영지 Predicting disease predisposition patterns of the personal genome     Seminar
23 나영지 Disease-related mutations predicted to impact protein function  J.Club

2012-12:
04 나영지 Predicting disease predisposition patterns of the personal genome   xMutant
10 나영지 Predicting disease predisposition patterns of the personal genome  TopicSem
22 나영지 Recurrent mutation of the ID3 gene in Burkitt lymphoma identified by integrated genome, exome and transcriptome sequencing     J.Club

2012-11:
14 나영지 Predicting disease predisposition patterns of the personal genome based on disease hierarchy  TopicSem

2012-10:
17 나영지 Predicting disease predisposition patterns from personal genome based on disease hierarchy  TopicSem
27 나영지 Linking disease associations with regulatory information in the human genome     J.Club

2012-09:
10 나영지 Predicting disease predisposition patterns from personal genome based on disease hierarchy  TopicSem

2012-08:
04 나영지 The CancerCell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity     J.Club
06 나영지 Predicting disease predisposition patterns of personal genome based on disease hierarchy  TopicSem
25 나영지 Evolution and Functional Impact of Rare Coding Variation from Deep Sequencing of Human Exomes     J.Club

2012-07:
16 나영지 Predicting disease predisposition patterns of personal genome based on disease hierarchy  TopicSem

2012-06:
18 나영지 Predicting disease predisposition of personal genome based on disease hierarchy  TopicSem

2012-05:
23 나영지 Predicting disease predisposition of personal genome based on disease hierarchy  TopicSem
25 나영지 Predicting disease predisposition of personal genome based on disease hierarchy  Seminar

2012-04:
09 나영지 Predicting the disease risks of personal genome based on disease hierarchy  TopicSem
21 나영지 Personal Omics Profiling Reveals Dynamic Molecular and Medical Phenotypes     J.Club
23 나영지 Predicting disease risks of personal genome based on disease hierarchy  TopicSem

2012-03:
05 나영지 Predicting the disease potential of personal genome based on disease hierarchy  TopicSem

2012-02:
06 나영지 Predicting the disease potential of personal genome based on disease hierarchy  TopicSem
07 나영지 Predicting the disease potential of personal genome based on disease hierarchy  MAInfo
25 나영지 Exome Sequencing Reveals DNAJB6 Mutations in Dominantly Inherited Myopathy     J.Club

2012-01:
07 나영지 Deep resequencing of GWAS loci identifies independent rare variants associated with inflammatory bowel disease     J.Club

2011-12:
20 나영지 Disease scoring system based on sequencing data  MAInfo
26 나영지 Disease scoring system based on sequencing data  TopicSem

2011-11:
05 나영지 Prioritizing candidate disease genes by network-based boosting of genome-wide association data     J.Club
07 나영지 Discovery of relationships between diseases and pathways from detected variants in next-generation sequencing data  TopicSem
15 나영지 Knowledge-based synergistic variant detection from NGS data  MAInfo
21 나영지 Discovery of disease risk patterns from next-generation sequencing data  TopicSem

2011-10:
13 나영지 Set-wise analysis for genome sequence interpretation  Seminar
17 나영지 Knowledge-based synergistic variant detection from NGS data  TopicSem
18 나영지 Considering goal and method  MAInfo

2011-09:
03 나영지 Exome Sequencing and Unrelated Findings in the Context of Complex Disease Research: Ethical and Clinical Implications     J.Club
15 나영지 Knowledge-based predicting functions of variants and identifying combinatorial rare variants  MAInfo
19 나영지 Discovery and classification of pathways perturbed in disease state based on gene set approach using whole genome sequencing data  TopicSem

2011-08:
08 나영지 Gene set enrichment based on combinatorial variants  TopicSem
22 나영지 Microarray Data Analysis     TopicSem
23 나영지 NGS Data Analysis     TopicSem
26 나영지 Epigenome DATABASE and Tools  TopicSem
26 나영지 R Introduction  TopicSem

2011-07:
18 나영지 Understanding cooperativity of microRNAs using microRNA association network  TopicSem
19 나영지 Predicting Phenotypic Severity of Uncertain Gene Variants  MAInfo
23 나영지 Exome sequencing and disease-network analysis of a single family implicate a mutation in KIF1A in hereditary spastic paraparesis     J.Club

2011-06:
01 나영지 Discovery of individually combinatorial rare variants in genes related to diseases  MAInfo
04 나영지 A Novel Adaptive Method for the Analysis of Next-Generation Sequencing Data to Detect Complex Trait Associations with Rare Variants Due to Gene Main Effects and Interactions     J.Club
13 나영지 Identification of disease-specific pathways applying gene set enrichment analysis to variants from next-generation sequencing data  TopicSem

2011-05:
16 나영지 AnsNGS Interpreting the Personal Human Genome Sequencing Data  TopicSem

2011-04:
05 나영지 Identification of novel transcripts using RNA-seq data  MAInfo
16 나영지 A map of human genome variation from population-scale sequencing     J.Club
18 나영지 AnsNGS Annotation Strategies for Interpreting the Personal Human Genome Sequencing Data  TopicSem
19 나영지 PoPoolation A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals     MAInfo

2011-03:
07 나영지 Identifying miRNA modules from miRNA-mRNA coexpression data  TopicSem
11 나영지 Problems in manipulating large scale NGS data   MAInfo
22 나영지 GAMES identifies and annotates mutations in next-generation sequencing projects  MAInfo
30 나영지 Validation of miRNA modules in terms of functional similarity  TopicSem

2011-02:
08 나영지 Identifying cancer driver genes in tumor genome sequencing studies  MAInfo
14 나영지 miRNA function prediction based on structure similarity  TopicSem
26 나영지 Clinical assessment incorporating a personal genome     J.Club

2011-01:
19 나영지 Relationship between structure and function of miRNAs  TopicSem

2010-12:
01 나영지 Structure-based miRNA function prediction  TopicSem
14 나영지 Problems in manipulating large scale NGS data  MAInfo
18 나영지 Computational identification of tissue-specific alternative splicing elements in mouse genes from RNA-Seq     J.Club
29 나영지 Structure-based miRNA function prediction  TopicSem

2010-11:
02 나영지 Novel multi-nucleotide polymorphisms in the human genome characterized by whole genome and exome sequencing  MAInfo
08 나영지 Parallel High Speed Annotation for Next Generation Sequencing  Seminar

2010-10:
11 나영지 ECCB2010 Conference report  Seminar
13 나영지 microRNA function prediction using structure similarity  TopicSem
15 나영지 ECCB2010 report  Seminar
20 나영지 microRNA function prediction using structure similarity  TopicSem
30 나영지 CNAseg - a novel framework for identification of copy number changes in cancer from second-generation sequencing data     J.Club

2010-09:
04 나영지 Exome sequencing identifies the cause of a mendelian disorder     J.Club
07 나영지 Targeted capture and massively parallel sequencing of 12 human exomes  MAInfo

2010-08:
23 나영지 AnsNGS - Annotation System of structural variation for Next Generation Sequencing data  Seminar
26 나영지 miRNA function prediction based on structure similarity  TopicSem
31 나영지 Brief description of team  MAInfo

2010-07:
06 나영지 Annotation System of structural variation for Next Generation Sequencing data  MAInfo
15 나영지 Structure-function relationship in miRNAs based on structure similarity  Seminar
17 나영지 ANNOVAR: Functional annotation of genetic variants from high-throughput sequencing data     J.Club

2010-06:
01 나영지 AnsNGS - Annotation System of structural variation for Next Generation Sequencing data  MAInfo
03 나영지 AnsNGS: Annotation System of structural variation for Next Generation Sequencing data  Seminar
05 나영지 Deep sequencing reveals differential expression of microRNAs in favorable versus unfavorable neuroblastoma     J.Club
17 나영지 Potent effect of miRNAs and miRNA stars on target function  Seminar
22 나영지 rQuant.web: a tool for RNA-Seq-based transcript quantitation     MAInfo

2010-05:
01 나영지 LookSeq: A browser-based viewer for deep sequencing data     J.Club
10 나영지 AnsNGS: Annotation System of structural variation for Next Generation Sequencing data  Seminar
25 나영지 Plan for NGS team project  MAInfo

2010-04:
05 나영지 Plan for NGS team project  Seminar
07 나영지 Annotation for Short Read  MAInfo
12 나영지 Annotation System for Next Generation Sequencing data (AnsNGS)  Seminar
14 나영지 Annotation System for Next Generation Sequencing data  MAInfo
19 나영지 AnsNGS: Annotation System of structural variation for Next Generation Sequencing data  Seminar

2010-03:
02 나영지 Progress of NGS data analysis replication  Seminar
15 나영지 Progress of NGS replicating  Seminar
20 나영지 Repertoire of microRNAs in Epithelial Ovarian Cancer as Determined by Next Generation Sequencing of Small RNA cDNA Libraries     J.Club

2010-02:
01 나영지 Replication plan: DNA sequencing of a cytogenetically normal acute myeloid leukemia genome  Seminar
06 나영지 MIRAGAA-a methodology for finding coordinated effects of microRNA expression changes and genome aberrations in cancer     J.Club
16 나영지 Progress in replicating  Seminar

2010-01:
18 나영지 Strategy for NGS data analysis  Seminar
25 나영지 Replicating papers: Genome variation discovery with high-throughput sequencing data  Seminar

2009-12:
07 나영지 BioCANDI / Transcript / Epigenome  Seminar
26 나영지 mimiRNA: a microRNA expression profiler and classification resource designed to identify functional correlations between microRNAs and their target     J.Club
28 나영지 High-throughput sequence analysis: work flows and data management  Seminar
30 나영지 Characterizing microRNA regulatory modules using microRNA-mRNA coexpression data  Seminar

2009-11:
09 나영지 The potential role of structure of microRNA precursor as a determinant in targeting genes  Seminar
23 나영지 Possibility of involvement of pre-miRNA secondary structure into mature miRNA function  Seminar
28 나영지 Identification of microRNA activity by Targets Reverse EXpression     J.Club
30 나영지 Bioinformatics for Next Generation Sequencing  Seminar

2009-10:
14 나영지 Destroying the degree of correlation between memberships in a pre-miR structure cluster  Seminar
24 나영지 Conserved Expression Patterns Predict microRNA Targets     J.Club

2009-09:
02 나영지 Online Resources for the Molecular Contextualization of Disease  BookReading
09 나영지 Secondary structures of microRNA precursors as potential determinants of targeting beyond seed pairing  Seminar
19 나영지 microPred: effective classification of pre-miRNAs for human miRNA gene prediction     J.Club
28 나영지 Possibility of involvement of pre-miRNA secondary structure into target function  Seminar

2009-08:
06 나영지 MicroRNAs with similar secondary structure of precursors participate in similar biological functions  Seminar
22 나영지 Intrinsic variability of gene expression encoded in nucleosome positioning sequences     J.Club
24 나영지 Modules based on microRNA-mRNA coexpression data reveal that microRNAs with similar secondary structure of precursors participate in similar biological functions  Seminar

2009-07:
11 나영지 ISMBECCB2009 Conference report  J.Club
16 나영지 Identifying and characterizing microRNA modules that co-regulate targets using microRNA-mRNA coexpression  Seminar

2009-06:
03 나영지 Microarrays for the Study of Viral Gene Expression During Human Cytomegalovirus Latent Infection  BookReading
11 나영지 Identifying microRNA modules that co-regulate targets using microRNA-mRNA coexpression  Seminar
25 나영지 Identifying microRNA modules that co-regulate targets using microRNA-mRNA coexpression  Seminar

2009-05:
07 나영지 Characterizing miRNA modules that co-regulate targets using miRNA-mRNA coexpression  Seminar
16 나영지 A combinatorial approach to determine the context-dependent role in transcriptional and posttranscriptional regulation in Arabidopsis thaliana     J.Club
25 나영지 Identifying microRNA modules that co-regulate targets using microRNA-mRNA coexpression  Seminar

2009-04:
02 나영지 MicroRNAs:Review of Discovery,Biogenesis,and Research Areas  Seminar
04 나영지 Identification of microRNAs with regulatory potential using a matched microRNA-mRNA time-course data     J.Club
14 나영지 Characterizing microRNAs that govern condition-specific regulation using microRNA-mRNA coexpression     TopicSem

2009-03:
07 나영지 Filtering of false positive microRNA candidates by a clustering-based approach     J.Club
12 나영지 Identifying condition-specific combinatorial miRNA regulation  Seminar

2009-02:
09 나영지 Condition-specific combinatorial miRNA interactions  Seminar
23 나영지 Identifying condition-specific combinatorial miRNA regulation  Seminar

2009-01:
15 나영지 Finding microRNA regulatory modules using miR-association map  Seminar
31 나영지 Finding microRNA regulatory modules in human genome using rule induction     J.Club

2008-12:
11 나영지 Identifying combinatorial condition-specific microRNAs  Seminar
20 나영지 Identification of MicroRNA Regulatory Modules in Arabidopsis via A Probabilistic Graphical Model     J.Club
29 나영지 Inferring condition-specific miRNAs from miRNA and mRNA expression profiles  Seminar

2008-11:
03 나영지 Identifying post-transcriptional regulatory networks by combinatorial analysis of microRNAs  Seminar
20 나영지 Network-based combinatorial analysis of microRNAs  Seminar
22 나영지 Analysis of regulatory network topology reveals functionally distinct classes of microRNAs     J.Club
24 나영지 Identifying post-transcriptional regulatory networks by combinatorial analysis of microRNAs  Seminar

2008-10:
16 나영지 Identifying combinatorial regulation of microRNAs  Seminar
18 나영지 Removal of AU Bias from Microarray mRNA Expression Data Enhances Computational Identification of Active MicroRNAs     J.Club

2008-09:
08 나영지 Association rule mining for large scale miRNA-mRNA expression data analysis  Seminar
29 나영지 Identifying tissue-specific combinatorial targeting in microRNA repression of gene expression  Seminar

2008-08:
09 나영지 Novel MicroRNA Candidates and miRNA-mRNA Pairs in Embryonic Stem (ES) Cells     J.Club
14 나영지 Regression-based inference of degree of miRNA-mediated gene repression  Seminar
30 나영지 MicroRNA regulation and the variability of human cortical gene expression     J.Club

2008-07:
05 나영지 Proliferating cells express mRNAs with shorted 3-untranslated regions and fewer microRNA target sites     J.Club
10 나영지 Using expression profiling data to identify miRNA-mRNA interaction  Seminar
14 나영지 Inferring effective regulatory activity of miRNAs  Seminar
24 나영지 Inference of miRNA function using co-expression and sequence similarity  Seminar

2008-06:
07 나영지 Individual mRNA expression profiles reveal the effects of specific microRNAs     J.Club
09 나영지 Integrating gene transcript and miRNA profiling  Seminar
27 나영지 Inferring miRNA regulation using information-theoretic criteria  Seminar

2008-05:
10 나영지 Inferring MicroRNA Activities by Combining Gene Expression with MicroRNA Target Prediction     J.Club
23 나영지 Combining Gene Expression with Binding Score  Seminar

2008-04:
12 나영지 Dissecting microregulation of a master regulatory network       J.Club
14 나영지 Evolutionary constraints in intronic and intergenic miRNAs  Seminar
28 나영지 Co-regulation between miRNAs and mRNAs using gene-coexpression network  Seminar

2008-03:
08 나영지 Systematic functional characterization of cis-regulatory motifs in human core promoters     J.Club
10 나영지 Validation of miRNA as a regulator in the circadian rhythm  Seminar
28 나영지 Patterns of sequence conservation of miRNAs  Seminar

2008-02:
22 나영지 Conserved sequences in microRNAs  Seminar

2008-01:
11 나영지 Identification and classification of intronic miRNAs along with intergenic miRNAs  Seminar
19 나영지 Global and Local Architecture of the Mammalian microRNA-Transcription Factor Regulatory Network     J.Club
29 나영지 Overview of Affymetrix GeneChip Gene 1.0 ST Array System  Seminar

2007-12:
08 나영지 Genomic analysis of human microRNA transcripts       J.Club
14 나영지 Comparison of genomic structure between intronic and intergenic miRNAs  Seminar
28 나영지 microRNA regulation depends on the regional effect  Seminar

2007-11:
03 나영지 Network-based discovery of functional differences between intronic and intergenic miRNAs  J.Club
06 나영지 Validation plan for circadian rhythm regulation by miRNAs  Seminar
30 나영지 microRNA regulation depends on the regional effect.  Seminar

2007-10:
05 나영지 Replicate of Tomlins’ work  Seminar
16 나영지 microRNA regulation depends on regional effect  Seminar
27 나영지 MicroRNA regulation of human protein-protein interaction network       J.Club

2007-09:
11 나영지 Construction of miRNA-mRNA interaction network in circadian rhythm  Seminar
15 나영지 Detection of a MicroRNA Signal in an In Vivo Expression Set of mRNAs       J.Club

2007-08:
10 나영지 MicroRNA as a Potential Regulator of Circadian Rhythm  Seminar
29 나영지 Identification of miRNAs involved in the regulation of circadian rhythm  Seminar

2007-07:
11 나영지 MicroRNA as a Potential Regulator of Circadian rhythm  Seminar
21 나영지 Evidence of spatially bound gene regulation in Mus musculus: decreased gene expression proximal to microRNA genomic location       J.Club
25 나영지 MicroRNA as a Potential Regulator of Circadian Rhythm  Seminar

2007-06:
01 나영지 MicroRNA as a Potential Regulator of Circadian Rhythm     Seminar
22 나영지 MicroRNA as a Potential Regulator of Circadian Rhythm  Seminar
23 나영지 microRNA Modulation of Circadian-Clock Period and Entrainment       J.Club

2007-05:
11 나영지 Circadian rhythm of mouse liver  Seminar
12 나영지 MicroRNA expression alterations are linked to tumorigenesis and non-neoplastic processes in pancreatic ductal adenocarcinoma       J.Club
21 나영지 MicroRNA as a Potential Regulator of Circadian Rhythm in Mouse Liver     Seminar

2007-04:
25 나영지 miRNAs and circadian rhythm  Seminar

2007-03:
10 나영지 Global analysis of microRNA target gene expression reveals that miRNA targets are lower expressed in mature mouse and Drosophila tissues than in the embryos       J.Club
14 나영지 Circadian rhythm regulated by miRNAs and target genes  Seminar
30 나영지 Cyclic miRNAs and mRNAs  Seminar

2007-02:
14 나영지 Circadian cycling of the mouse liver by miRNA microarray  Seminar

2007-01:
05 나영지 Circadian cycling of the mouse liver by miRNA microarray  Seminar
15 나영지 miRNA preprocessing  Seminar
26 나영지 Circadian cycling of mouse liver revealed by miRNA profile  Seminar
27 나영지 Profiling Caenorhabditis elegans non-coding RNA expression with a combined microarray       J.Club

2006-12:
02 나영지 Microdeletion encompassing MAPT at chromosome 17q21.3 is associated with developmental delay and learning disability       J.Club
15 나영지 MicroRNA expression profile of mouse circadian rhythm  Seminar
23 나영지 Strategies to determine the biological function of microRNAs       J.Club

2006-11:
01 나영지 Standardization of GEO as gene expression data  Seminar
24 나영지 Categorization of GEO data  Seminar

2006-10:
11 나영지 [KOSMI paper] Progress in comparison of GO term between doses in B10 data  Seminar

2006-09:
23 나영지 Creation and implications of a phenome-genome network       J.Club

2006-07:
05 나영지 Progress in B10 data analysis  xMutant
07 나영지 Specific dose responsiveness in B10 to ionizing radiation  MAInfo
15 나영지 A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies       J.Club

2006-06:
02 나영지 Data Analysis of Methotrexate in Rheumatoid Arthritis     MAInfo
07 나영지 Meta-analytic approach of breast cancer  xMutant
10 나영지 The model organism as a system:integrating ‘omics’ data sets       J.Club
26 나영지 Gene Expression in Differential Responses of Time and Dose to IR  Seminar

2006-05:
10 나영지 Breastome : Meta-analytic approach of breast cancer  xMutant
13 나영지 Oncogenic pathway signatures in human cancers as a guide to targeted therapies       J.Club
29 나영지 Lung Fibroblast Radiation data analysis  Seminar

2006-04:
12 나영지 Comparison of Meta Analysis Methods  xMutant
24 나영지 Strategy for Microarray Meta-analysis  Seminar

2006-03:
17 나영지 Meta Analysis of Microarray  MAInfo
25 나영지 Functional annotation and network reconstruction through cross-platform integration of microarray data       J.Club

2006-02:
04 나영지 Finding biological process modifications in cancer tissues by mining gene expression correlations       J.Club
08 나영지 CCD data primary analysis  MAInfo
13 나영지 Lung Fibroblast Radiation data analysis  Seminar
28 나영지 Functional association from time-series microarray data  xMutant

2006-01:
04 나영지 BMT Data Analysis Strategy  MAInfo
07 나영지 Comparison of normalization methods for CodeLink Bioarray data       J.Club
09 나영지 BMT data analysis  Seminar
17 나영지 Analysis of Time Series Gene Expression Data  xMutant
18 나영지 CCD Data Analysis  MAInfo

2005-12:
14 나영지 From signatures to models  MAInfo
26 나영지 Research plan  Seminar
27 나영지 BMT data analysis results  xMutant

2005-11:
01 나영지 Radiation Data Analysis  xMutant
02 나영지 Genetical Genomics  MAInfo
14 나영지 바이오캔디를 이용한 방사선데이터 자료분석  Seminar
23 나영지 Combining microarray and genetic analysis  MAInfo
26 나영지 Interactome-transcriptome analysis reveals the high centrality of genes differentially expressed genes in lung cancer tissues       J.Club
28 나영지 Radiation data analysis using BIOCANDi  Seminar
29 나영지 Uncovering transcriptional regulation of metabolism by using metabolic network topology  xMutant

2005-10:
01 나영지 Study of coordinative gene expression at the biological process level       J.Club
04 나영지 Bone Marrow Transplantation Microarray Analysis  xMutant

2005-09:
14 나영지 Codelink chip microarray analysis  MAInfo
26 나영지 Radiation data analysis  Seminar

2005-08:
02 나영지 Affy chip Analysis in BioCANDi  xMutant
10 나영지 Radiation Data Analysis - Time dependent  MAInfo
13 나영지 Use of extreme patient samples for outcome prediction from gene expression data       J.Club

2005-07:
05 나영지 An error in using FDR  xMutant
20 나영지 Summary of Radiation Data Analysis  MAInfo

2005-06:
14 나영지 Biological Interpretation of Radiation Data  xMutant
22 나영지 Understanding to the complicated biological responses to IR  MAInfo
25 나영지 Discovering molecular functions significantly related to phenotypes by combining gene expression data and biological information       J.Club

2005-05:
07 나영지 Modularized learning of genetic interaction networks from biological annotations and mRNA expression data       J.Club
11 나영지 Outline of Radiation Data Report  MAInfo
17 나영지 Liver Cancer 데이터 분석  xMutant
25 나영지 Affymetrix Arrays: Diagnostic and Analysis Tools  MAInfo

2005-04:
12 나영지 [Plan]Extension of Venn Diagram  xMutant
13 나영지 Comparison of Statistical Methods in Replicated Microarray Profiles  MAInfo
25 나영지 Related Study to Low Dose Ionizing Radiation Data [MAInfo] Seminar

2005-03:
11 나영지 NA  xMutant
14 나영지 A statistical method for identifying differential gene–gene co-expression patterns       J.Club
23 나영지 Secondary Analysis of Radiation Data  MAInfo

2005-02:
25 나영지 Analysis of B10 by Radiation Exposure  MAInfo

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