BioEMR Team

Related projects:

  • BioEMR: ÀÓ»óÁ¤º¸¿Í ¹ÙÀÌ¿ÀÁ¤º¸ÀÇ ±¹Á¦Ç¥ÁØ ±â¹Ý ÅëÇÕ ¸ðµ¨¸µ ¹× ¹ÙÀÌ¿À EMR ¿¬µ¿±â¼ú
  • Tissue MicroArray-Object Model (TMA-OM)

    Related research:

  • Communication CDA-based structured clinical document by ¼­È­Á¤
  • Calculate the optimal subset of UMLS vocabularies by ÀÌÁ¤¾Ö
  • The Performance Evaluation of Efficient MAGE-ML Storage Strategies by ±è¼¼¿µ
  • Integrating Microarray Gene Expression- Object Model and Clinical Document Architecture using CDE by ¹ÚÀ¯¶û
  • Electronic Clinical Trial (eCT) Management System °³¹ß by ±è¿Á±¸
  • Tissue MicroArray-Object Model (TMA-OM) by ÀÌÇý¿ø
  • Clinico-Histopathological Metadata Registry (CHMR) by ¹ÚÀ¯¶û
  • Cancer Genomics-Object Model (CAGE-OM) by ¹ÚÀ¯¶û

    Date: every Tuesday 9:00 A.M. (Weekly meeting)
    Members(6): ¹ÚÀ¯¶û,ÀÌÇý¿ø, ½ÉÀçÇö, ±èµµ±Õ, ¿ìÁ¤ÈÆ,Á¶¼º¹ü(helper), À±Çý¼º(helper)
    History: 2006 2005 2004 2003

    2006

    5  May

    2 ¹ÚÀ¯¶û: CHMR °£·«È­ ¹× UMLS ¿¬µ¿ ¡¡
    9 ÀÌÇý¿ø: Progress in developing template in Xperanto-TMA ¡¡
    16 ±èµµ±Õ: Progress in KMA drug database ¡¡
    23 ¿ìÁ¤ÈÆ: ¡¡
    30 ¹ÚÀ¯¶û: ¡¡

    4 April

    4 ¿ìÁ¤ÈÆ: progress in GTD database - localize CTD ¡¡
    11 ¹ÚÀ¯¶û: BioEMR ÇÁ·ÎÁ§Æ® ÁøÇà°èȹ ¹× À¯¹æ¾Ï¼¾ÅÍ ÀÓ»óÀÚ·á Viewer °³¹ß ¡¡
    18 ±èµµ±Õ: KMA Drug DB - KMA web interface ¡¡
    25 ¿ìÁ¤ÈÆ: Progress in GTD database - Parsing localized data for DB input file

    3 March

    2 ±èµµ±Õ: Implementation ChromiViz for integration with bioCANDi ¡¡
    7 ¿ìÁ¤ÈÆ: Research plan (about toxicogenomics meta DB) ¡¡
    14 ÀÌÇý¿ø: Progress in Xperanto-TMA ¡¡
    21 ¿ìÁ¤ÈÆ: Progress in GTD database
    28 ±èµµ±Õ: KMA drug DB ¡¡

    2 February

    2 ¹ÚÀ¯¶û: CHMR & CHMR Form builder ¡¡
    9 ÀÌÇý¿ø: Xperanto-Tox: strategy for data modeling toxicogenomics experiment ¡¡
    16 ÇÑÁÖ ¿¬±â µ¿°è¿÷¼¥(KOGO-KSBI) ¡¡
    23 ½ÉÀçÇö: KMA Drug DB

    1 January

    5 À±Çý¼º: Comments and Improvements of proposing method ¡¡
    12 ¹ÚÀ¯¶û: CHMR ÇöȲ ¹× ÁøÇà°èȹ ¡¡
    19 ÀÌÇý¿ø: Xperanto-TMA: implementation for applying templates
    26 ½ÉÀçÇö: °­³²¼¾ÅÍ °ËÁøÀÚ·á ±â¹Ý µ¥ÀÌÅÍ¿þ¾îÇϿ콺 ±¸Ãà ¹× À¥±â¹Ý ÅëÇպм® ½Ã½ºÅÛ ±¸Ãà

    ¡¡

    2005

    12 December

    1 ÀÌÇý¿ø: Xperanto-Tox: Integration of Xperanto and Xperanto-TMA for toxicogenomics ¡¡
    8 ¹ÚÀ¯¶û: CHMR: Clinico-Histopahtological Metadata Registry ¡¡
    15 À±Çý¼º: An Evolutionary Approach for Clustering Problem in Data Mining
    22 ÀÌÇý¿ø: Draft data model for representing toxicological assessments
    29 ¹ÚÀ¯¶û: HL7 Clinical Document Architecture, Release 2

    11 November

    3 ÀÌÇý¿ø: Approaches for integration of XPERANTO and XPERANTO-TMA ¡¡
    10 ¹ÚÀ¯¶û: Cancer Genomics Object Model :An Object Model for Cancer Research using Functional Genomics Data ¡¡
    17 ÀÌ¿µÁÖ: ·ù¸¶Æ¼½º³»°ú ÀÇ·Ú chip ½ÇÇè
    24 À±Çý¼º HCE Method based on GA for Combining Different Cluster Results

    10 October

    6  Lab ÀÌÇý¿ø: Liver Cancer Data Analysis: Understanding clinical data on liver cancer patients ¡¡
    Research ¹ÚÀ¯¶û: A Framework for storing various biological material and multiple functional genomics data : an application in cancer genomics data
    13  Lab ¹ÚÀ¯¶û: Cancer Genomics Object Model (progress) ¡¡
    20  Lab ÀÌ¿µÁÖ: ÀÇ·Ú»ùÇà chip½ÇÇè
    Research À¯¹æ¾Ï¼¾ÅÍ: BioEMR
    27  Lab À±Çý¼º: Heterogeneous Ensemble
    Research ¼¼Á¾´ë: ¡¡

    September

    1 ÀÌÇý¿ø: BioCandi Module: Filtering Genes with Low Variance
    8 À±Çý¼º: The problem of combining multiple partitions of a set of objects
    15 ¹ÚÀ¯¶û: A Framework for storing various biological material information and functional genomics data (Feasibility Study)
    22 ÀÌ¿µÁÖ: Affymetrix Test chip ½ÇÇè
    29 À±Çý¼º: Decision tree based ensemble methods
    ¡¡

    August

    4 À±Çý¼º: Heterogeneous Ensemble
    11 ÀÌÇý¿ø: Xperanto-TMA : progress in the "XML Export" function
    18 ¹ÚÀ¯¶û: A Framework for storing various biological material information and functional genomics data
    25 ÀÌ¿µÁÖ: affymetrix chip½ÇÇè °úÁ¤
    ¡¡

    July

    7 À¯¹æ¾Ï¼¾ÅÍ: Á¦2¼¼ºÎ ÁøÇà»óȲ
    14 ¼¼Á¾´ë: Ãë¼Ò
    21 ±è¿Á±¸: PhactaX ±â´É°³¼±
    28 ÀÌ¿µÁÖ: chip Á¾·ù¿¡ µû¸¥ ½ÇÇè¹æ¹ý ºñ±³
    ¡¡

    June

    2 ±è¿Á±¸ : PhactaManager : ÀÓ»ó½ÃÇèÀÚ·á ÃßÃâ¸ðµâ °³¹ß
    9 ¼¼Á¾´ë : TMA document generator ¼³°è ¹× ±¸Çö
    16 ÀÌÇý¿ø : Xperanto-TMA °³¹ß ÁøÇà»óȲ: View ºÎºÐ ±¸Çö°ú Vocabulary ÀÔ·Â
    23 ¹ÚÀ¯¶û : ISO/IEC 11179 ¿Í Entity-Attribute-Value ¸ðµ¨ ±â¹ÝÀÇ ÀÓ»óÀÚ·á ÀúÀå¼ÒÀÇ ±¸Çö
    30 ±è¼¼¿µ : ¡¡
    27 ¹ÚÀ¯¶û : BioEMR ÇÁ·ÎÁ§Æ® ÁøÇà»çÇ× – Clinical data storage
    ¡¡

    May

    12 À¯ÀÇÇõ- ¼¼Á¾´ë : Sample DocumentÀ» ¿ëÇÑ RDB¿Í NXD ÀúÀå ºñ±³
    19 ¹ÚÀ¯¶û : BioEMR ÇÁ·ÎÁ§Æ®: clinical data storage
    26 ±ÇÇýÁø : BioEMR ÁøÇà°èȹ(Á¦ 2 ¼¼ºÎ°úÁ¦)
    16 ¹ÚÀ¯¶û :   BioEMR ÇÁ·ÎÁ§Æ® ÁøÇà°èȹ

    April

    7 Ȳ±âÅÂ: BioEMR ÇÁ·ÎÁ§Æ® °ü·Ã À¯¹æ¾Ï ¼¾ÅÍ ¹ßÇ¥
    14 ±è¿Á±¸: PhactaDictionary (Vocabulary ÄÚµù) °³¹ß
    21 ÀÌÇý¿ø : Xperanto-TMA : Test using Real Data
    28 ±è¼¼¿µ : Comprehensive Solution to the XMLtoRelational Mapping Problem
    18 ±è¿Á±¸ : Monthly progress : NRL PhactaX °³¹ßÇöȲ ¹× ¿Ï·á°èȹ

    ¡¡

    March

    8 ¹ÚÀ¯¶û: Common Data Element(CDE)ÀÇ ÀúÀå Æ÷¸Ë(ISO 11179)°ú HL7 TemplateÀÇ ÃֽŠµ¿Çâ
    15 ±è¿Á±¸ : PhactaForm: °øÀ¯ eCRF °ü¸® À¥»çÀÌÆ® (ÁøÇàÇöȲ)
    24 ÀÌÇý¿ø :   Xperanto-TMA system °³¹ß ÁøÇà»çÇ×
    31 ¹ÚÀ¯¶û :   Cancer Genomics Object Model ÁøÇà»çÇ×
    21 ÀÌÇý¿ø :   Monthly progress : Progress in developing TMA-OM and Xperanto-TMA

    ¡¡

    Febuary

    1 ±è¿Á±¸:   PhactaForm: °øÀ¯ eCRF °ü¸® À¥»çÀÌÆ®
    15 ÀÌÇý¿ø :   Analysis method review of TMA data for querying Xperanto-TMA
    22 ¼­È­Á¤ :   À¯¹æ¾Ï¼¾ÅÍ ÀÚ·áÀ¯Çü ºÐ¼® ¹× ±¸Á¶È­µÈ ÀÓ»ó¹®¼­ÀÇ ±¸¼º Àü·« II
    26 ¹ÚÀ¯¶û :   Monthly progress : Implementation of Cancer Genomics Object Model

    ¡¡

    January

    4 ÀÌÇý¿ø:   Object model and database for tissue microarray
    11 ±è¿Á±¸ :   PhactaManager(ÀÓ»ó½ÃÇèÀÚ·á°ü¸®½Ã½ºÅÛ) °³¹ß ÇöȲ
    18 ¹ÚÀ¯¶û :   Cancer Genomics Object Model(2)
    25 ¼­È­Á¤ :   À¯¹æ¾Ï¼¾ÅÍ ÀÚ·áÀ¯Çü ºÐ¼® ¹× ±¸Á¶È­µÈ ÀÓ»ó¹®¼­ÀÇ ±¸¼º Àü·«
    22 ±è¿Á±¸ :   Monthly progress : PhactaManager(ÀÓ»ó½ÃÇèÀÚ·á°ü¸®½Ã½ºÅÛ) °³¹ß ÇöȲ

    ¡¡

    2004

    12 December

    7 È«½Â±Ç :   Factors affercting the diffusion of EMR in hospital from a physician's perspective
    14 ±è¼¼¿µ :   LegoDB: Customizing Relational Storage for XML Documents
    21 ¼­È­Á¤ :   Works in progress - Clinical document generation & retrieval module (2)
    28 ¹ÚÀ¯¶û :   First Step: An Object model for Oncology research using Microaray (MAGE/Onc – OM)
    13 È«½Â±Ç :   Monthly progress : Factors affercting the diffusion of EMR in hospital from a physician's perspective

    ¡¡

    11 November

    2 È«½Â±Ç :   Doctor-patient relationship in the era of e-health
    16 ¼­È­Á¤ :   Works in progress - Clinical document generation & retrieval module (1)
    23 ¹ÚÀ¯¶û :   Guideline and web application for Microarray Experiment in Oncogenomics
    30 ±è¿Á±¸ :   ÀÓ»ó½ÃÇè ÀÚ·á ÀúÀå ±¸Çö
    15 ¼­È­Á¤ :   Monthly progress : Intorduction of CDA related applications and works in progress

    ¡¡

    10 October

    12 ±è¼¼¿µ :   Development of XML-based Clinical Document Generation Module
    12 ¼­È­Á¤ :   Implementation of XML-based clinical document as standard for communication
    19 ¹ÚÀ¯¶û :   Minimum Information About a Microarray Experiment for Oncology research (MIAME/Oncology)
    26 ±è¿Á±¸ :   The manuscript for the introduction of PhactaManager
    18 ¹ÚÀ¯¶û :   Monthly progress : Integration of MAGE-OM and CDA

    ¡¡

    September

    6 ¼­È­Á¤ :   Plan of Paper submission
    14 ¹ÚÀ¯¶û :   INFOGENMED :
     A virtual laboratory for accessing and integrating genetic and medical information for health applications
    21 ±è¿Á±¸ :   ÀüÀÚ Áõ·Ê±â·ÏÁö¿¡¼­ÀÇ SNP ÀÔ·Â ¼³°è
    13 ±è¿Á±¸ :   Monthly progress : ÀÓ»ó½ÃÇè ¼öÇà°ü¸® ½Ã½ºÅÛ : ºÐ¼®, ¼³°è ¹× PhactaDesigner °³¹ß

    ¡¡

    August

    9 ¡¡ Seo:   OCS¿Í BtoB¿¬°è¹æ¾È ¡¡
    16 ¡¡ Park:   An object model and database for biomedical informatics ¡¡
    23 ¡¡ Okgu:   PhactaDesigner - eCRF design program ¡¡
    30 ¡¡ Hong:   Social Factors Affecting Diffusion of the Telemedicine from a Physicians' Perspective ¡¡
    17 ¡¡ Hong:  Monthly progress : Clinical decision making at the point-of-care ¡¡

    ¡¡

    July

    5 ¡¡ Goo:   Design of eCRF entry module ¡¡
    26 ¡¡ Hong:   ¿ø°ÝÁø·á ½ÃÇà ½Ã µµÃâµÉ »çȸ, ¹®È­Àû, °æÁ¦Àû È¿°ú ¡¡
    6 ¡¡ Lee:   Monthly progress : Mapping between the Disease Names of OMIM and MeSH ¡¡

    ¡¡

    June

    7 ¡¡ Seo:   Evaluation Strategy of Clinical Document Prototype ¡¡
    14 ¡¡ Hong:   Characteristics of GLIF3 ¡¡
    21 ¡¡ Lee:   A study of effective UMLS concept indexing in radiology reports ¡¡
    park:   Integrating MAGE-OM and CDA using CDE
    28 ¡¡ Park:   Integrating MAGE-OM and CDA using CDE(Generating Template) ¡¡
    8 ¡¡ Park:   Monthly progress : Integrating MAGE-OM and CDA using CDE(first step: generating HL7 Template) ¡¡

    ¡¡

    May

    3 ¡¡ Seo:   Architecture of a clinical document based on the definition of section and specific instance ¡¡
    10 ¡¡ Lee:   ¹æ»ç¼±°ú º¸°í¼­ÀÇ È¿À²ÀûÀÎ UMLS concept indexingÀ» À§ÇÑ ¿¬±¸(º¸¿Ï ¹× °á·Ð, °èȹ) ¡¡
    17 ¡¡ Hong:   Representing clinical guidelines in GLIF (Overview of GLIF) ¡¡
    24 ¡¡ Park:   Integration of MAGE-OM and CDA - 1 (modeling CDA template for clinical data in microarray) ¡¡
    31 ¡¡ Goo:   XML Schema design for CRF entry pages ¡¡
    11 ¡¡ Hong:   Monthly progress : Privacy to the electronic medical record and telemedicine ¡¡

    ¡¡

    April

    12 ¡¡ Park:   CDA Release 1.0 DTD Integration - second story ¡¡
    19 ¡¡ Goo:   Introduction of e-Clinical Trial System ¡¡
    13 ¡¡ Lee:   Monthly progress : Optimized UMLS vocabulary ¡¡

    ¡¡

    March

    8 ¡¡ Park:   CDA Release 1.0 DTD Integration ¡¡
    15 ¡¡ Seo:   Presenting of document constraints for structured discharge note ¡¡
    22 ¡¡ Lee:   UMLS indexing °á°ú º¸°í ¡¡
    29 ¡¡ Hong:   Representing clinical guidelines in GLIF ¡¡
    16 ¡¡ Seo:   Monthly progress : Presenting of document constraints for structured discharge note ¡¡

    ¡¡

    February

    2 ¡¡ Park:   Implementation CDE(common data element) in TrialDB ¡¡
    9 ¡¡ Seo:   Generating CDA DTD using DTDGenerator tool ¡¡
    11 ¡¡ Yoo:   HL7 Reference Information Model ¡¡
    16 ¡¡ Lee:   UMLS indexing of test set ¡¡
    23 ¡¡ BioEMR   Action Plan of CDMS Developemnt ¡¡
    17 ¡¡ Park:   Monthly progress : Implementation plan for TrialDB ¡¡

    ¡¡

    January

    5 ¡¡ Hong:   Review of Guideline ¡¡
    12 ¡¡ Seo:   Relational data in XML (for clinical document processing) ¡¡
    19 ¡¡ Lee:   Works in progress ¡¡
    20 ¡¡ Hong:   Monthly progress : Clinical Guideline ¡¡

    ¡¡

    2003

    12  December

    1 ¡¡ Hong:   Review of Guideline ¡¡
    8 ¡¡ Seo:   Design of standardized XML DTD for exchange structured discharge note ¡¡
    15 ¡¡ Lee:   ¿¬±¸ ÁøÇà»çÇ× ¡¡
    22 ¡¡ Park:   Review of caCORE ¡¡
    23 ¡¡ Seo:   Monthly progress : Web-based Clinical Data Management System ¡¡
    ¡¡ Lee:   Monthly progress : Optimized vocabulary DB ¡¡

    ¡¡

    11  November

    3 ¡¡ Lee:   Arden Syntax Arden Syntax Spec
    ¡¡ Seo:   Schedule of CDA-based Data Structure design ¡¡
    10 ¡¡ Park:   Clinical Trial Registry Systems ¡¡
    17 ¡¡ Lee:   Manual indexing and programming ¡¡
    ¡¡ Hong:   ÀÇ·á°èÀÇ New Paradigm ¡¡
    24 ¡¡ Park:   Clinical Trial Registry Systems (review of TrialDB) ¡¡
    25 ¡¡ Seo:   Monthly Progress ¡¡

    ¡¡

    10  October

    6 ¡¡ Seo:   Design of CDA-based Data Structure ¡¡
    ¡¡ Hong:   °­³²¼¾ÅÍ, ºÐ´çº´¿ø charting ±¸Á¶ ºÐ¼® ¡¡
    13 ¡¡ Lee:   Mapping free text into UMLS concepts - Progress ¡¡
    ¡¡ Park:   About NCI CDE(Common Data Element) ¡¡
    27 ¡¡ Hong:   Critical Pathway ¡¡
    28 ¡¡ Hong:   Monthly progress : Critical Pathway ¡¡

    ¡¡

    September

    1 ¡¡ Lee:   Mapping free text into UMLS concepts ¡¡
    15 ¡¡ Hong:   ±Ù°ñ°Ý°èÁúȯ¿¬±¸ chartÀÇ ¿¹ ¡¡
    ¡¡ Park:   Cancer ¡¡
    22 ¡¡ Seo:   Design of CDA-based CDMS schema - Clinical Information Table ¡¡
    ¡¡ Lee:   Mapping free text into UMLS concepts 2 ¡¡
    29 ¡¡ Park:   Cancer Coding Standard ICD-O ¡¡
    30 ¡¡ Seo:   Works in progress ¡¡

    ¡¡

    August

    4 Design Objectives
    • Data modeling : CDA Ç¥ÁØ¿¡ ´ëÀÀÇÏ´Â ÀÓ»óÁø·á±â·ÏÀÇ ÀڷᱸÁ¶¸¦ µµÃâ / µ¥ÀÌÅÍ º£À̽ºÀÇ ¼³°è ¹× ±¸Ãà
    • XML-based Clinical document generation : CDA ¹× MAGE-OMÇ¥ÁØ¿¡ ´ëÀÀÇÏ´Â XMLÇüÅÂÀÇ ¹®¼­·Î º¯È¯
    • User Interface : Data Entry, Display, Storage and Retrieval data
    • Data Integration : ¾Ï ¿ªÇÐÁ¤º¸ / ¸¶ÀÌÅ©·Î¾î·¹ÀÌ ¸ðµ¨°úÀÇ ÅëÇÕ
    Further Works
    • Hong : °­³²¼¾ÅÍ, ºÐ´çº´¿ø charting ±¸Á¶ ºÐ¼®
    • Lee : Coding systemÀÇ È°¿ë ¿¹
    • Park : ¾Ï¿ªÇÐ DB schema ¼³°è
    • Seo : CDA-based Clinical inormation schema ¼³°è
    11 ¡¡ Park: ¿ªÇÐ DB(CancerDB) schema ºÐ¼® CancerDB ¼³¹®Áö
    CancerDB ÄÚȣƮ º¯¼ö
    ¡¡ Seo: Stanford Univ.- TrailDB database schema ºÐ¼®
    ±¹¸³¾Ï¼¾Å¸ - ¾Ï°ËÁø À¥ ÀÎÅÍÆäÀ̽º
    Trial/DB developer's manual
    18 ¡¡ Hong: °­³²¼¾ÅÍ, ºÐ´çº´¿ø charting ±¸Á¶ ºÐ¼® ¡¡
    ¡¡ Lee: Coding systemÀÇ È°¿ë ¿¹ ¡¡
    25 ¡¡ Seo: Design of CDA-based CDMS schema - Patient Data Table ¡¡
    ¡¡ park: ´Ù¸¥ ³ª¶óÀÇ cancer DB ±¸Ãà »ç·Ê- NCI caCORE I ¡¡
    26 ¡¡ Seo: Monthly : Introduction to Clinical Informatics ¡¡

    ¡¡