Applications for semantic similarity measure

A cluster-based approach for semantic similarity in the biomedical domain.
Al-Mubaid H, Nguyen HA
Conf Proc IEEE Eng Med Biol Soc1() p2713-7 (2006) 10.1109/IEMBS.2006.259235

Improving missing value estimation in microarray data with gene ontology.
Tuikkala J, Elo L, Nevalainen OS, Aittokallio T
Bioinformatics22(5) p566-72 (2006 Mar 1) 10.1093/bioinformatics/btk019

Semantic classification of biomedical concepts using distributional similarity.
Fan JW, Friedman C
J Am Med Inform Assoc14(4) p467-77 (2007 Jul-Aug) 10.1197/jamia.M2314

FunSimMat: a comprehensive functional similarity database.
Schlicker A, Albrecht M
Nucleic Acids Res36(Database issue) pD434-9 (2008 Jan) 10.1093/nar/gkm806

Gaining confidence in biological interpretation of the microarray data: the functional consistence of the significant GO categories.
Yang D, Li Y, Xiao H, Liu Q, Zhang M, Zhu J, Ma W, Yao C, Wang J, Wang D, Guo Z, Yang B
Bioinformatics24(2) p265-71 (2008 Jan 15) 10.1093/bioinformatics/btm558

Déjà vu--a study of duplicate citations in Medline.
Errami M, Hicks JM, Fisher W, Trusty D, Wren JD, Long TC, Garner HR
Bioinformatics24(2) p243-9 (2008 Jan 15) 10.1093/bioinformatics/btm574

Semantically linking and browsing PubMed abstracts with gene ontology.
Vanteru BC, Shaik JS, Yeasin M
BMC Genomics9 Suppl 1() pS10 (2008) 10.1186/1471-2164-9-S1-S10

GOSemSim: an R package for measuring semantic similarity among GO terms and gene products.
Yu G, Li F, Qin Y, Bo X, Wu Y, Wang S
Bioinformatics26(7) p976-8 (2010 Apr 1) 10.1093/bioinformatics/btq064