| category | Clusters, Significantly overrepresented terms
BC : BioCarta term, GM : GenMAPP term, KG : KEGG term, PG : PharmGKB term |
| core |
cluster 71, 73 BC_Angiotensin_II_mediated_activation_of_JNK_Pathway_via_Pyk2_dependent_signaling BC_BCR_Signaling_Pathway BC_Bioactive_Peptide_Induced_Signaling_Pathway BC_CCR3_signaling_in_Eosinophils BC_CXCR4_Signaling_Pathway BC_Cadmium_induces_DNA_synthesis_and_proliferation_in_macrophages BC_Calcium_Signaling_by_HBx_of_Hepatitis_B_virus BC_EGF_Signaling_Pathway BC_EPO_Signaling_Pathway BC_Erk1_Erk2_Mapk_Signaling_pathway BC_Erk_and_PI_3_Kinase_Are_Necessary_for_Collagen_Binding_in_Corneal_Epithelia BC_Fc_Epsilon_Receptor_I_Signaling_in_Mast_Cells BC_Growth_Hormone_Signaling_Pathway BC_How_Progesterone_Initiates_the_Oocyte_Maturation BC_IGF_1_Signaling_Pathway BC_IL_2_Receptor_Beta_Chain_in_T_cell_Activation BC_IL_2_signaling_pathway BC_IL_3_signaling_pathway BC_IL_6_signaling_pathway BC_Influence_of_Ras_and_Rho_proteins_on_G1_to_S_Transition BC_Inhibition_of_Cellular_Proliferation_by_Gleevec BC_Inhibition_of_Matrix_Metalloproteinases BC_Insulin_Signaling_Pathway BC_Integrin_Signaling_Pathway BC_Keratinocyte_Differentiation BC_Links_between_Pyk2_and_Map_Kinases BC_MAPKinase_Signaling_Pathway BC_METS_affect_on_Macrophage_Differentiation BC_Multiple_antiapoptotic_pathways_from_IGF_1R_signaling_lead_to_BAD_phosphorylation BC_NFAT_and_Hypertrophy_of_the_heart_Transcription_in_the_broken_heart BC_Nerve_growth_factor_pathway_NGF BC_PDGF_Signaling_Pathway BC_Ras_Signaling_Pathway BC_Regulation_of_transcriptional_activity_by_PML BC_Role_of_EGF_Receptor_Transactivation_by_GPCRs_in_Cardiac_Hypertrophy BC_Role_of_ERBB2_in_Signal_Transduction_and_Oncology BC_Role_of_Erk5_in_Neuronal_Survival BC_Role_of_MAL_in_Rho_Mediated_Activation_of_SRF BC_Roles_of_arrestin_dependent_Recruitment_of_Src_Kinases_in_GPCR_Signaling BC_Signaling_Pathway_from_G_Protein_Families BC_Signaling_of_Hepatocyte_Growth_Factor_Receptor BC_Sprouty_regulation_of_tyrosine_kinase_signals BC_TPO_Signaling_Pathway BC_T_Cell_Receptor_Signaling_Pathway BC_The_IGF_1_Receptor_and_Longevity BC_Transcription_factor_CREB_and_its_extracellular_signals BC_Trefoil_Factors_Initiate_Mucosal_Healing BC_Trka_Receptor_Signaling_Pathway BC_fMLP_induced_chemokine_gene_expression_in_HMC_1_cells BC_mCalpain_and_friends_in_Cell_motility BC_p38_MAPK_Signaling_Pathway |
| communicating |
cluster 4, 6, 12, 18, 20, 23, 29, 35, 38, 40, 42, 57, 64, 65, 66, 67, 69, 78, 82, 92, 94, 95, 99 BC_ATM_Signaling_Pathway BC_Activation_of_PKC_through_G_protein_coupled_receptor BC_Agrin_in_Postsynaptic_Differentiation BC_Antigen_Dependent_B_Cell_Activation BC_Apoptotic_Signaling_in_Response_to_DNA_Damage BC_Attenuation_of_GPCR_Signaling BC_B_Lymphocyte_Cell_Surface_Molecules BC_Cell_Cycle_G1_S_Check_Point BC_Ceramide_Signaling_Pathway BC_Classical_Complement_Pathway BC_Complement_Pathway BC_Control_of_skeletal_myogenesis_by_HDAC_calcium_calmodulin_dependent_kinase_CaMK BC_Cyclins_and_Cell_Cycle_Regulation BC_Estrogen_responsive_protein_Efp_controls_cell_cycle_and_breast_tumors_growth BC_HIV_Induced_T_Cell_Apoptosis BC_Human_Cytomegalovirus_and_Map_Kinase_Pathways BC_IL12_and_Stat4_Dependent_Signaling_Pathway_in_Th1_Development BC_IL_5_Signaling_Pathway BC_Ion_Channel_and_Phorbal_Esters_Signaling_Pathway BC_Lectin_Induced_Complement_Pathway BC_Lissencephaly_gene_LIS1_in_neuronal_migration_and_development BC_Map_Kinase_Inactivation_of_SMRT_Corepressor BC_Monocyte_and_its_Surface_Molecules BC_Neutrophil_and_Its_Surface_Molecules BC_Nitric_Oxide_Signaling_Pathway BC_PTEN_dependent_cell_cycle_arrest_and_apoptosis BC_Pelp1_Modulation_of_Estrogen_Receptor_Activity BC_Pertussis_toxin_insensitive_CCR5_Signaling_in_Macrophage BC_Phosphoinositides_and_their_downstream_targets BC_Phospholipase_C_Signaling_Pathway BC_Phospholipase_C_d1_in_phospholipid_associated_cell_signaling BC_RB_Tumor_Suppressor_Checkpoint_Signaling_in_response_to_DNA_damage BC_Ras_Independent_pathway_in_NK_cell_mediated_cytotoxicity BC_Reelin_Signaling_Pathway BC_Regulation_of_Splicing_through_Sam68 BC_Regulation_of_ck1_cdk5_by_type_1_glutamate_receptors BC_Regulation_of_eIF4e_and_p70_S6_Kinase BC_Role_of_MEF2D_in_T_cell_Apoptosis BC_Role_of_PI3K_subunit_p85_in_regulation_of_Actin_Organization_and_Cell_Migration BC_Role_of_arrestins_in_the_activation_and_targeting_of_MAP_kinases BC_Sonic_Hedgehog_SHH_Receptor_Ptc1_Regulates_cell_cycle BC_Stat3_Signaling_Pathway BC_Stress_Induction_of_HSP_Regulation BC_TACI_and_BCMA_stimulation_of_B_cell_immune_responses BC_TNFR2_Signaling_Pathway BC_TNF_Stress_Related_Signaling BC_T_Cytotoxic_Cell_Surface_Molecules BC_T_Helper_Cell_Surface_Molecules BC_The_4_1BB_dependent_immune_response BC_The_Role_of_Eosinophils_in_the_Chemokine_Network_of_Allergy BC_Thrombin_signaling_and_protease_activated_receptors BC_Tumor_Suppressor_Arf_Inhibits_Ribosomal_Biogenesis BC_WNT_Signaling_Pathway BC_Y_branching_of_actin_filaments BC_cdc25_and_chk1_Regulatory_Pathway_in_response_to_DNA_damage BC_uCalpain_and_friends_in_Cell_spread |
| peripheral |
cluster 2, 10, 25, 27, 30, 32, 36, 43, 45, 47, 48, 49, 51, 58, 60, 68, 74, 76, 79, 81, 83, 84, 88, 89, 90, 91, 96, 97 BC_Activation_of_Src_by_Protein_tyrosine_phosphatase_alpha BC_Angiotensin_converting_enzyme_2_regulates_heart_function BC_BTG_family_proteins_and_cell_cycle_regulation BC_Basic_mechanism_of_action_of_PPARa_PPARb_d_and_PPARg_and_effects_on_gene_expression BC_CBL_mediated_ligand_induced_downregulation_of_EGF_receptors BC_CDK_Regulation_of_DNA_Replication BC_CTCF_First_Multivalent_Nuclear_Factor BC_CTL_mediated_immune_response_against_target_cells BC_Ca2_Calmodulin_dependent_Protein_Kinase_Activation BC_Caspase_Cascade_in_Apoptosis BC_Catabolic_Pathways_for_Methionine_Isoleucine_Threonine_and_Valine BC_Cell_Cycle_G2_M_Checkpoint BC_Cytokine_Network BC_Cytokines_and_Inflammatory_Response BC_D4_GDI_Signaling_Pathway BC_Deregulation_of_CDK5_in_Alzheimers_Disease BC_Dicer_Pathway BC_Downregulated_of_MTA_3_in_ER_negative_Breast_Tumors BC_Effects_of_calcineurin_in_Keratinocyte_Differentiation BC_Eicosanoid_Metabolism BC_Endocytotic_role_of_NDK_Phosphins_and_Dynamin BC_Erythrocyte_Differentiation_Pathway BC_Extrinsic_Prothrombin_Activation_Pathway BC_FAS_signaling_pathway_CD95 BC_Fibrinolysis_Pathway BC_GATA3_participate_in_activating_the_Th2_cytokine_genes_expression BC_Gamma_aminobutyric_Acid_Receptor_Life_Cycle BC_HIV_I_Nef_negative_effector_of_Fas_and_TNF BC_IFN_gamma_signaling_pathway BC_IL_10_Anti_inflammatory_Signaling_Pathway BC_IL_17_Signaling_Pathway BC_Induction_of_apoptosis_through_DR3_and_DR4_5_Death_Receptors BC_Intrinsic_Prothrombin_Activation_Pathway BC_Malate_aspartate_shuttle BC_Mitochondrial_Carnitine_Palmitoyltransferase_CPT_System BC_Multi_Drug_Resistance_Factors BC_NFkB_activation_by_Nontypeable_Hemophilus_influenzae BC_Nuclear_Receptors_in_Lipid_Metabolism_and_Toxicity BC_Oxidative_Stress_Induced_Gene_Expression_Via_Nrf2 BC_Phospholipids_as_signalling_intermediaries BC_Phosphorylation_of_MEK1_by_cdk5_p35_down_regulates_the_MAP_kinase_pathway BC_Platelet_Amyloid_Precursor_Protein_Pathway BC_Presenilin_action_in_Notch_and_Wnt_signaling BC_Proteolysis_and_Signaling_Pathway_of_Notch BC_Rac_1_cell_motility_signaling_pathway BC_Regulation_of_BAD_phosphorylation BC_Regulation_of_PGC_1a BC_Regulators_of_Bone_Mineralization BC_Rho_cell_motility_signaling_pathway BC_Role_of_PPAR_gamma_Coactivators_in_Obesity_and_Thermogenesis BC_Role_of_Tob_in_T_cell_activation BC_SODD_TNFR1_Signaling_Pathway BC_SREBP_control_of_lipid_synthesis BC_Selective_expression_of_chemokine_receptors_during_T_cell_polarization BC_Shuttle_for_transfer_of_acetyl_groups_from_mitochondria_to_the_cytosol BC_Sonic_Hedgehog_Shh_Pathway BC_TGF_beta_signaling_pathway BC_TNFR1_Signaling_Pathway BC_Th1_Th2_Differentiation BC_The_role_of_FYVE_finger_proteins_in_vesicle_transport BC_Toll_Like_Receptor_Pathway BC_Visceral_Fat_Deposits_and_the_Metabolic_Syndrome BC_Vitamin_C_in_the_Brain BC_beta_arrestins_in_GPCR_Desensitization BC_g_Secretase_mediated_ErbB4_Signaling_Pathway |
| independent |
cluster 11, 17, 24, 44, 46, 54, 77 BC_Antisense_Pathway BC_Circadian_Rhythms BC_Internal_Ribosome_entry_pathway BC_Proepithelin_Conversion_to_Epithelin_and_Wound_Repair_Control BC_Reversal_of_Insulin_Resistance_by_Leptin BC_Stathmin_and_breast_cancer_resistance_to_antimicrotubule_agents BC_Wnt_LRP6_Signalling |