| category | Clusters, Significantly overrepresented terms |
| core |
cluster, 8, 16, 63, 70, 72 biosynthesis macromolecule biosynthesis macromolecule metabolism metabolism protein biosynthesis protein metabolism regulation of protein biosynthesis regulation of translation regulation of translational fidelity ribosomal small subunit assembly and maintenance ribosomal subunit assembly ribosome assembly ribosome biogenesis and assembly translation |
| communicating |
cluster, 6, 7, 12, 25, 32, 34, 38, 59, 64, 77, 78, 84, 92 35S primary transcript processing RNA metabolism RNA methylation RNA modification amino acid activation aromatic compound metabolism citrate metabolism cytoplasm organization and biogenesis glutamate biosynthesis glutamate metabolism glutamine family amino acid biosynthesis glutamine family amino acid metabolism host pathogen interaction main pathways of carbohydrate metabolism negative regulation of translation nucleoside metabolism nucleotide metabolism posttranslational protein folding processing of 20S pre rRNA protein folding pyrimidine nucleotide biosynthesis pyrimidine nucleotide metabolism rRNA metabolism rRNA modification rRNA processing regulation of biosynthesis regulation of metabolism regulation of physiological process response to copper ion response to inorganic substance response to metal ion response to stimulus response to stress ribosomal large subunit biogenesis ribosome biogenesis tRNA aminoacylation tRNA aminoacylation for protein translation tRNA methylation tRNA modification tRNA processing transcription from Pol I promoter translational elongation translational initiation trehalose catabolism tricarboxylic acid cycle vacuolar protein catabolism |
| peripheral |
cluster, 1, 3, 5, 9, 11, 21, 23, 29, 30, 31, 40, 41, 42, 44, 49, 51, 52, 53, 55, 58, 60, 67, 68, 69, 71, 74, 79, 80, 86, 88, 93, 97, 98, 99 ATbiosynthesis ATmetabolism ATsynthesis coupled electron transport ATsynthesis coupled proton transport DNA dependent DNA replication DNA metabolism DNA packaging DNA repair DNA replication DNA replication and chromosome cycle DNA replication initiation DNA replication synthesis of RNA primer Golgi vesicle transport RNA processing SRdependent cotranslational membrane targeting SRdependent cotranslational membrane targeting translocation age dependent general metabolic decline aging alcohol biosynthesis alcohol catabolism alcohol metabolism amine metabolism amino acid and derivative metabolism amino acid metabolism anaerobic respiration apical bud growth asparagine catabolism aspartate family amino acid catabolism aspartate family amino acid metabolism base excision repair carbohydrate biosynthesis carbohydrate catabolism carbohydrate metabolism carbohydrate transport carboxylic acid biosynthesis carboxylic acid metabolism catabolism cell aging cell cycle cell death cell growth and/or maintenance cell organization and biogenesis cell proliferation cellular morphogenesis cellular physiological process cellular process cellular response to nitrogen starvation chromatin assembly or disassembly chromatin modification chromosome condensation chronological cell aging cotranslational membrane targeting death development electron transport energy coupled proton transport down electrochemical gradient energy derivation by oxidation of organic compounds energy pathways ergosterol biosynthesis ergosterol metabolism establishment and/or maintenance of chromatin architecture fatty acid biosynthesis folic acid and derivative metabolism gluconeogenesis glucose catabolism glucose metabolism glutathione biosynthesis glutathione metabolism glycogen metabolism glycolysis glycoprotein biosynthesis glycoprotein metabolism hexose biosynthesis hexose catabolism hexose metabolism hexose transport hydrogen ion homeostasis hydrogen transport intracellular transport isotropic bud growth late endosome to vacuole transport leading strand elongation lipid biosynthesis lipid metabolism macromolecule catabolism methionine metabolism mitochondrial electron transport succinate to ubiquinone mitochondrial electron transport ubiquinol to cytochrome c mitochondrion distribution mitochondrion inheritance modification dependent protein catabolism monosaccharide biosynthesis monosaccharide catabolism monosaccharide metabolism monosaccharide transport monovalent inorganic cation transport morphogenesis mutagenesis negative regulation of nucleobase nucleoside nucleotide and nucleic acid metabolism negative regulation of transcription negative regulation of transcription DNA dependent nuclear migration nuclear organization and biogenesis nuclear positioning nucleobase nucleoside nucleotide and nucleic acid metabolism nucleoside phosphate metabolism nucleotide excision repair organic acid biosynthesis organic acid metabolism oxidative phosphorylation phospholipid metabolism postreplication repair protein Golgi retention protein Golgi targeting protein amino acid acetylation protein amino acid glycosylation protein catabolism proteolysis and peptidolysis proton transport purine nucleoside triphosphate biosynthesis purine nucleoside triphosphate metabolism purine ribonucleoside triphosphate biosynthesis purine ribonucleoside triphosphate metabolism pyruvate metabolism regulation of exit from mitosis regulation of pH response to DNA damage stimulus response to endogenous stimulus retrograde transport vesicle recycling within Golgi ribonucleoside triphosphate biosynthesis ribonucleoside triphosphate metabolism ribosomal large subunit assembly and maintenance secretory pathway sister chromatid cohesion sodium ion transport steroid biosynthesis steroid metabolism sterol biosynthesis sterol metabolism tRNA metabolism transcription transcription DNA dependent transcription from Pol II promoter transport tricarboxylic acid cycle intermediate metabolism ubiquitin dependent protein catabolism vacuole inheritance vacuole organization and biogenesis vesicle mediated transport |
| independent |
cluster, 2, 10, 13, 14, 26, 33, 36, 39, 43, 46, 48, 50, 62, 65, 76, 90, 95, 96 Golgi to plasma membrane transport M phase of mitotic cell cycle RNA localization RNA splicing RNA splicing via transesterification reactions RNA splicing via transesterification reactions with bulged adenosine as nucleophile arginine biosynthesis calcium mediated signaling cell adhesion chromosome segregation conjugation conjugation with cellular fusion cyclin catabolism cytochrome c oxidase biogenesis di tri valent inorganic cation homeostasis donor preference fatty acid metabolism fatty acid oxidation glycogen biosynthesis iron ion transport loss of chromatin silencing mRNA localization intracellular mRNA processing mating type switching and recombination membrane fusion metal ion homeostasis microtubule nucleation mitosis mitotic anaphase mitotic anaphase B mitotic cell cycle mitotic metaphase/anaphase transition mitotic sister chromatid segregation mitotic spindle assembly nuclear mRNA splicing via spliceosome nuclear membrane organization and biogenesis nucleocytoplasmic transport ornithine metabolism polyamine transport polyol transport positive regulation of gene expression epigenetic protein complex assembly protein complex assembly multichaperone pathway protein deubiquitination regulation of cell size regulation of glycogen biosynthesis regulation of meiosis regulation of transcription mating type specific response to external stimulus response to pheromone sexual reproduction sister chromatid segregation spindle assembly telomerase dependent telomere maintenance transition metal ion homeostasis ubiquitin cycle vesicle fusion |