ArrayXPath
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ArrayXPath has searched
  #pathways #nodes (non-redundant) #nodes (redundant)
GenMAPP 45 1391 1875
PharmGKB 9 134 180
KEGG 70 740 1788
BioCarta 346 1584 8969

ArrayXPath has identified 2565 (97.68%) out of 2626 input elements in the following pathways

Source # pathways # identified nodes # total nodes
GenMAPP 45 775 766
PharmGKB 9 35 145
KEGG 69 503 1529
BioCarta 335 1098 5092



Set FDR cut off    
 
Cluster 1 has 6 gene products                 
ArrayXPath has identified 4 out of 6 input elements in 4 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMapp//Hs_Peptide_GPCRs      1/69 (72) 0.1417 0.1100
GenMAPP//Hs_TGF_Beta_Signaling_Pathway      1/49 (57) 0.1021 0.1100
GenMAPP//Hs_Matrix_Metalloproteinases      1/28 (30) 0.0592 0.1380
GenMapp//Hs_GPCRs_Class_A_Rhodopsin-like      1/238 (292) 0.4307 0.2509



Cluster 2 has 37 gene products                 
ArrayXPath has identified 14 out of 37 input elements in 17 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMAPP//Hs_Ovarian_Infertility_Genes      2/29 (32) 0.0327 0.1900
GenMapp//Hs_Smal_ligand_GPCRs      1/16 (16) 0.1502 0.2554
GenMAPP//Hs_Blood_Clotting_Cascade      1/19 (22) 0.1759 0.2554
GenMAPP//Hs_Heme_Biosynthesis      1/9 (9) 0.0873 0.2554
GenMapp//Hs_GPCRs_Class_A_Rhodopsin-like_2      1/18 (20) 0.1674 0.2554
GenMAPP//Hs_Fatty_Acid_Synthesis      1/15 (15) 0.1414 0.2554
GenMAPP//Hs_S1P_Signaling      1/25 (25) 0.2252 0.2846
GenMAPP//Hs_G13_Signaling_Pathway      1/31 (32) 0.2717 0.2846
GenMapp//Hs_Inflammatory_Response_Pathway      1/29 (29) 0.2565 0.2846
GenMAPP//Hs_Apoptosis      1/34 (34) 0.2940 0.2846
GenMapp//Hs_GPCRs_Other      2/119 (171) 0.3398 0.2907
GenMAPP//Hs_Glycolysis_and_Gluconeogenesis      1/42 (44) 0.3503 0.2907
GenMAPP//Hs_Orphan_GPCRs      1/15 (16) 0.1414 0.3286
GenMapp//Hs_Peptide_GPCRs      3/69 (72) 0.0287 0.3333
GenMapp//Hs_Wnt_signaling      1/61 (61) 0.4679 0.3396
GenMapp//Hs_GPCRs_Class_A_Rhodopsin-like      3/238 (292) 0.4389 0.3396
GenMapp//Hs_Cell_Cycle      1/87 (96) 0.5969 0.4078



Cluster 3 has 32 gene products                 
ArrayXPath has identified 9 out of 32 input elements in 9 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMapp//Hs_Inflammatory_Response_Pathway      1/29 (29) 0.1732 0.1683
GenMapp//Hs_Gap_Junction_Proteins_Connexins      1/15 (15) 0.0932 0.1683
GenMAPP//Hs_MAPK_Cascade      1/24 (25) 0.1454 0.1683
GenMapp//Hs_Monoamine_GPCRs      1/33 (33) 0.1948 0.1683
GenMAPP//Hs_G13_Signaling_Pathway      1/31 (32) 0.1841 0.1683
GenMAPP//Hs_Eicosanoid_Synthesis      1/15 (19) 0.0932 0.1879
GenMapp//Hs_Wnt_signaling      2/61 (61) 0.0558 0.3377
GenMapp//Hs_GPCRs_Other      1/119 (171) 0.5539 0.4187
GenMapp//Hs_GPCRs_Class_A_Rhodopsin-like      1/238 (292) 0.8163 0.5485



Cluster 4 has 12 gene products                 
ArrayXPath has identified 7 out of 12 input elements in 9 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMapp//Hs_Proteasome_Degradation      1/35 (35) 0.1637 0.2384
GenMAPP//Hs_Apoptosis      1/34 (34) 0.1594 0.2384
GenMAPP//Hs_Translation_Factors      1/49 (51) 0.2224 0.2384
GenMAPP//Hs_TGF_Beta_Signaling_Pathway      1/49 (57) 0.2224 0.2384
GenMAPP//Hs_Fatty_Acid_Degradation      1/26 (26) 0.1240 0.2384
GenMapp//Hs_Cell_Cycle      1/87 (96) 0.3644 0.2929
GenMAPP//Hs_G_Protein_Signaling      1/77 (81) 0.3294 0.2929
GenMAPP//Hs_Electron_Transport_Chain      1/105 (105) 0.4234 0.3025
GenMAPP//Hs_MAPK_Cascade      1/24 (25) 0.1149 0.7391



Cluster 5 has 15 gene products                 
ArrayXPath has identified 7 out of 15 input elements in 6 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMAPP//Hs_Translation_Factors      2/49 (51) 0.0228 0.1020
GenMAPP//Hs_G_Protein_Signaling      1/77 (81) 0.3294 0.3157
GenMAPP//Hs_Electron_Transport_Chain      1/105 (105) 0.4234 0.3157
GenMapp//Hs_Proteasome_Degradation      1/35 (35) 0.1637 0.3157
GenMapp//Hs_Wnt_signaling      1/61 (61) 0.2699 0.3157
GenMapp//Hs_Cell_Cycle      1/87 (96) 0.3644 0.3157



Cluster 6 has 25 gene products                 
ArrayXPath has identified 10 out of 25 input elements in 9 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMAPP//Hs_Glycogen_Metabolism      2/33 (34) 0.0218 0.1367
GenMAPP//Hs_Translation_Factors      2/49 (51) 0.0457 0.1432
GenMapp//Hs_Peptide_GPCRs      2/69 (72) 0.0844 0.1763
GenMAPP//Hs_GPCRs_Class_B_Secretin_like      1/23 (28) 0.1540 0.2414
GenMAPP//Hs_G13_Signaling_Pathway      1/31 (32) 0.2024 0.2537
GenMAPP//Hs_Glycolysis_and_Gluconeogenesis      1/42 (44) 0.2648 0.2767
GenMapp//Hs_Wnt_signaling      1/61 (61) 0.3623 0.3245
GenMAPP//Hs_G_Protein_Signaling      1/77 (81) 0.4353 0.3411
GenMapp//Hs_GPCRs_Class_A_Rhodopsin-like      2/238 (292) 0.5315 0.3702



Cluster 7 has 22 gene products                 
ArrayXPath has identified 11 out of 22 input elements in 9 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMAPP//Hs_Catacholamine_Biosynthesis      1/4 (4) 0.0313 0.0775
GenMapp//Hs_Krebs-TCA_Cycle      2/31 (32) 0.0233 0.0775
GenMAPP//Hs_tRNA_Synthetases      2/21 (21) 0.0110 0.0817
GenMapp//Hs_Cell_Cycle      2/87 (96) 0.1474 0.2738
GenMapp//Hs_Ribosomal_Proteins      1/83 (83) 0.4930 0.4578
GenMAPP//Hs_TGF_Beta_Signaling_Pathway      1/49 (57) 0.3269 0.4578
GenMAPP//Hs_G_Protein_Signaling      1/77 (81) 0.4667 0.4578
GenMapp//Hs_Wnt_signaling      1/61 (61) 0.3905 0.4578
GenMAPP//Hs_Electron_Transport_Chain      1/105 (105) 0.5796 0.4784



Cluster 8 has 41 gene products                 
ArrayXPath has identified 21 out of 41 input elements in 15 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMapp//Hs_Nuclear_Receptors      2/37 (52) 0.0969 0.3320
GenMAPP//Hs_G13_Signaling_Pathway      2/31 (32) 0.0712 0.3320
GenMAPP//Hs_Matrix_Metalloproteinases      1/28 (30) 0.3360 0.3320
GenMAPP//Hs_G_Protein_Signaling      2/77 (81) 0.3048 0.3320
GenMAPP//Hs_Translation_Factors      2/49 (51) 0.1546 0.3320
GenMAPP//Hs_tRNA_Synthetases      1/21 (21) 0.2639 0.3320
GenMAPP//Hs_Fatty_Acid_Synthesis      1/15 (15) 0.1962 0.3320
GenMAPP//Hs_Blood_Clotting_Cascade      1/19 (22) 0.2419 0.3320
GenMAPP//Hs_Fatty_Acid_Degradation      1/26 (26) 0.3161 0.3320
GenMAPP//Hs_Nucleotide_Metabolism      1/15 (15) 0.1962 0.3553
GenMAPP//Hs_Electron_Transport_Chain      2/105 (105) 0.4532 0.3851
GenMAPP//Hs_Glycolysis_and_Gluconeogenesis      1/42 (44) 0.4607 0.3851
GenMapp//Hs_Krebs-TCA_Cycle      2/31 (32) 0.0712 0.3869
GenMapp//Hs_Ribosomal_Proteins      1/83 (83) 0.7104 0.5272
GenMapp//Hs_Cell_Cycle      1/87 (96) 0.7277 0.5272



Cluster 9 has 27 gene products                 
ArrayXPath has identified 8 out of 27 input elements in 8 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMAPP//Hs_Matrix_Metalloproteinases      1/28 (30) 0.1505 0.1814
GenMAPP//Hs_Fatty_Acid_Synthesis      1/15 (15) 0.0833 0.1814
GenMAPP//Hs_Glycogen_Metabolism      1/33 (34) 0.1752 0.1814
GenMapp//Hs_Proteasome_Degradation      1/35 (35) 0.1849 0.1814
GenMAPP//Hs_TGF_Beta_Signaling_Pathway      1/49 (57) 0.2500 0.2044
GenMapp//Hs_Cell_Cycle      1/87 (96) 0.4043 0.2834
GenMAPP//Hs_Electron_Transport_Chain      1/105 (105) 0.4672 0.2866
GenMAPP//Hs_Cholesterol_Biosynthesis      1/14 (14) 0.0779 0.3824



Cluster 10 has 39 gene products                 
ArrayXPath has identified 18 out of 39 input elements in 14 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMAPP//Hs_Translation_Factors      3/49 (51) 0.0231 0.2368
GenMAPP//Hs_G_Protein_Signaling      3/77 (81) 0.0731 0.3745
GenMAPP//Hs_Ovarian_Infertility_Genes      1/29 (32) 0.3172 0.3961
GenMapp//Hs_Nuclear_Receptors      1/37 (52) 0.3863 0.3961
GenMapp//Hs_Proteasome_Degradation      1/35 (35) 0.3697 0.3961
GenMapp//Hs_Ribosomal_Proteins      2/83 (83) 0.2922 0.3961
GenMAPP//Hs_Matrix_Metalloproteinases      1/28 (30) 0.3081 0.3961
GenMapp//Hs_GPCRs_Class_C_Metabotropic_glutamate_pheromone      1/15 (18) 0.1783 0.3961
GenMAPP//Hs_S1P_Signaling      1/25 (25) 0.2800 0.3961
GenMAPP//Hs_Fatty_Acid_Degradation      1/26 (26) 0.2895 0.3961
GenMAPP//Hs_Glycolysis_and_Gluconeogenesis      1/42 (44) 0.4261 0.3972
GenMAPP//Hs_TGF_Beta_Signaling_Pathway      1/49 (57) 0.4777 0.4082
GenMapp//Hs_Wnt_signaling      1/61 (61) 0.5562 0.4386
GenMAPP//Hs_Electron_Transport_Chain      1/105 (105) 0.7587 0.5556



Cluster 11 has 15 gene products                 
ArrayXPath has identified 3 out of 15 input elements in 4 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMAPP//Hs_Apoptosis      1/34 (34) 0.0716 0.0383
GenMAPP//Hs_MAPK_Cascade      1/24 (25) 0.0509 0.0383
GenMAPP//Hs_G13_Signaling_Pathway      1/31 (32) 0.0654 0.0383
GenMAPP//Hs_Fatty_Acid_Synthesis      1/15 (15) 0.0320 0.0685



Cluster 12 has 30 gene products                 
ArrayXPath has identified 14 out of 30 input elements in 10 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMapp//Hs_Ribosomal_Proteins      3/83 (83) 0.0379 0.1515
GenMAPP//Hs_Acetylcholine_Synthesis      1/7 (7) 0.0637 0.1697
GenMAPP//Hs_S1P_Signaling      2/25 (25) 0.0214 0.1712
GenMAPP//Hs_Cholesterol_Biosynthesis      1/14 (14) 0.1237 0.2470
GenMAPP//Hs_Ovarian_Infertility_Genes      1/29 (32) 0.2405 0.3841
GenMAPP//Hs_Translation_Factors      1/49 (51) 0.3739 0.4977
GenMAPP//Hs_Electron_Transport_Chain      1/105 (105) 0.6412 0.5502
GenMapp//Hs_GPCRs_Other      1/119 (171) 0.6890 0.5502
GenMapp//Hs_Cell_Cycle      1/87 (96) 0.5697 0.5502
GenMAPP//Hs_G_Protein_Signaling      1/77 (81) 0.5246 0.5502



Cluster 13 has 7 gene products                 
ArrayXPath has identified 1 out of 7 input elements in 1 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMAPP//Hs_MAPK_Cascade      1/24 (25) 0.0173 0.0173



Cluster 14 has 6 gene products                 
ArrayXPath has identified 3 out of 6 input elements in 5 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMAPP//Hs_MAPK_Cascade      1/24 (25) 0.0509 0.0583
GenMAPP//Hs_Fatty_Acid_Degradation      1/26 (26) 0.0551 0.0583
GenMAPP//Hs_TGF_Beta_Signaling_Pathway      1/49 (57) 0.1021 0.0810
GenMAPP//Hs_G_Protein_Signaling      1/77 (81) 0.1572 0.0998
GenMAPP//Hs_Eicosanoid_Synthesis      1/15 (19) 0.0320 0.1017



Cluster 15 has 3 gene products                 
ArrayXPath has identified 1 out of 3 input elements in 1 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMapp//Hs_Gap_Junction_Proteins_Connexins      1/15 (15) 0.0108 0.0108



Cluster 16 has 27 gene products                 
ArrayXPath has identified 9 out of 27 input elements in 9 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMAPP//Hs_Glycogen_Metabolism      1/33 (34) 0.1752 0.1770
GenMAPP//Hs_MAPK_Cascade      1/24 (25) 0.1303 0.1770
GenMAPP//Hs_Ovarian_Infertility_Genes      1/29 (32) 0.1555 0.1770
GenMAPP//Hs_Matrix_Metalloproteinases      1/28 (30) 0.1505 0.1770
GenMapp//Hs_Monoamine_GPCRs      1/33 (33) 0.1752 0.1770
GenMAPP//Hs_TGF_Beta_Signaling_Pathway      1/49 (57) 0.2500 0.2165
GenMapp//Hs_Peptide_GPCRs      1/69 (72) 0.3351 0.2539
GenMapp//Hs_GPCRs_Class_A_Rhodopsin-like      2/238 (292) 0.4094 0.2757
GenMAPP//Hs_Cholesterol_Biosynthesis      1/14 (14) 0.0779 0.4724



Cluster 17 has 35 gene products                 
ArrayXPath has identified 18 out of 35 input elements in 14 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMAPP//Hs_Electron_Transport_Chain      3/105 (105) 0.1492 0.1114
GenMAPP//Hs_Blood_Clotting_Cascade      1/19 (22) 0.2205 0.1114
GenMAPP//Hs_Calcium_Channels      1/26 (28) 0.2895 0.1114
GenMAPP//Hs_Matrix_Metalloproteinases      1/28 (30) 0.3081 0.1114
GenMAPP//Hs_Fatty_Acid_Synthesis      1/15 (15) 0.1783 0.1114
GenMapp//Hs_Cell_Cycle      2/87 (96) 0.3120 0.1114
GenMAPP//Hs_G_Protein_Signaling      2/77 (81) 0.2626 0.1114
GenMapp//Hs_Proteasome_Degradation      1/35 (35) 0.3697 0.1174
GenMAPP//Hs_Translation_Factors      1/49 (51) 0.4777 0.1241
GenMAPP//Hs_TGF_Beta_Signaling_Pathway      1/49 (57) 0.4777 0.1241
GenMapp//Hs_Wnt_signaling      1/61 (61) 0.5562 0.1323
GenMapp//Hs_Peptide_GPCRs      1/69 (72) 0.6021 0.1323
GenMapp//Hs_GPCRs_Class_A_Rhodopsin-like      1/238 (292) 0.9667 0.1973
GenMapp//Hs_Nuclear_Receptors      2/37 (52) 0.0807 0.2304



Cluster 18 has 39 gene products                 
ArrayXPath has identified 16 out of 39 input elements in 15 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMAPP//Hs_Fatty_Acid_Degradation      2/26 (26) 0.0343 0.0429
GenMAPP//Hs_Blood_Clotting_Cascade      2/19 (22) 0.0189 0.0473
GenMAPP//Hs_TGF_Beta_Signaling_Pathway      2/49 (57) 0.1066 0.0533
GenMapp//Hs_Pentose_Phosphate_Pathway      1/7 (8) 0.0780 0.0533
GenMAPP//Hs_Steroid_Biosynthesis      1/9 (33) 0.0992 0.0533
GenMAPP//Hs_Eicosanoid_Synthesis      1/15 (19) 0.1601 0.0572
GenMAPP//Hs_Orphan_GPCRs      1/15 (16) 0.1601 0.0572
GenMapp//Hs_GPCRs_Class_A_Rhodopsin-like_2      1/18 (20) 0.1890 0.0591
GenMAPP//Hs_Ovarian_Infertility_Genes      1/29 (32) 0.2875 0.0653
GenMAPP//Hs_GPCRs_Class_B_Secretin_like      1/23 (28) 0.2353 0.0653
GenMapp//Hs_Cell_Cycle      2/87 (96) 0.2642 0.0653
GenMAPP//Hs_Glycolysis_and_Gluconeogenesis      1/42 (44) 0.3894 0.0811
GenMAPP//Hs_G_Protein_Signaling      1/77 (81) 0.6000 0.1071
GenMapp//Hs_Peptide_GPCRs      1/69 (72) 0.5589 0.1071
GenMapp//Hs_GPCRs_Class_A_Rhodopsin-like      1/238 (292) 0.9512 0.1585



Cluster 19 has 38 gene products                 
ArrayXPath has identified 14 out of 38 input elements in 13 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
Pathway Identified node p-value q-value
GenMAPP//Hs_Apoptosis      2/34 (34) 0.0439 0.2111
GenMAPP//Hs_GPCRs_Class_B_Secretin_like      1/23 (28) 0.2091 0.3217
GenMapp//Hs_Proteasome_Degradation      1/35 (35) 0.3013 0.3217
GenMapp//Hs_Smal_ligand_GPCRs      1/16 (16) 0.1502 0.3217
GenMAPP//Hs_G13_Signaling_Pathway      1/31 (32) 0.2717 0.3217
GenMAPP//Hs_Glycogen_Metabolism      1/33 (34) 0.2866 0.3217
GenMAPP//Hs_Matrix_Metalloproteinases      1/28 (30) 0.2488 0.3217
GenMAPP//Hs_Fatty_Acid_Synthesis      1/15 (15) 0.1414 0.3217
GenMAPP//Hs_G_Protein_Signaling      3/77 (81) 0.0382 0.3669
GenMapp//Hs_Wnt_signaling      1/61 (61) 0.4679 0.4497
GenMapp//Hs_Ribosomal_Proteins      1/83 (83) 0.5792 0.5060
GenMAPP//Hs_Electron_Transport_Chain      1/105 (105) 0.6685 0.5354
GenMapp//Hs_GPCRs_Class_A_Rhodopsin-like      1/238 (292) 0.9287 0.6866



Cluster 20 has 36 gene products                 
ArrayXPath has identified 14 out of 36 input elements in 12 out of 45 GenMAPP pathways.
  Clusters
GenMAPP 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
PharmGKB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
KEGG 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 NA
BioCarta 1 2 3 4 5 6