
Identifying multi-biomarkers to distinguish malignant from benign colorectal tumours by a mixed integer programming.
Meng Zou, Peng-Jun Zhang, Xin-Yu Wen, Luonan Chen, Ya-Ping Tian and Yong Wang (under review)
Topological Analysis of Statistical Epistasis Networks Reveals Pathways Associated with Alzheimer's Disease.
Qinxin Pan, Ting Hu, Li Shen, Andrew Saykin and Jason Moore (under review)
¡°N-of-1-pathways¡± unveils personal deregulated mechanisms from a single pair of RNA-seq samples: towards precision medicine.
Vincent Gardeux, Ikbel Achour, Mark Maienschein-Cline, Gurunadh Parinandi, Jianrong Li, Haiquan Li, Joe Gn Garcia and Yves A Lussier (under review)
Knowledge Boosting: A graph-based integration with multi-omics data and genomic knowledge for cancer clinical outcome prediction.
Dokyoon Kim, Je-Gun Joung, Kyung-Ah Sohn, Helen Hyunjung Shin, Marylyn Ritchie and Ju Han Kim (under review)

New Horizons in Translational Bioinformatics: TBC 2013
Ju Han Kim
BMC Medical Genomics 2014, 7(Suppl 1):I1
Concordance of deregulated mechanisms unveiled in underpowered experiments: PTBP1 knockdown case study.
Vincent Gardeux, Ahmet D. Arslan, Ikbel Achour, Tsui-Ting Ho, William T. Beck and Yves A. Lussier
BMC Medical Genomics 2014, 7(Suppl 1):S1
In Silico Cancer Cell versus Stroma cellularity index computed from species-specific human and mouse transcriptome of xenograft models: towards accurate stroma targeting therapy assessment.
Xinan Yang, Yong Huang, Younghee Lee, Vincent Gardeux, Ikbel Achour, Kelly Regan, Ellen Rebman, Haiquan Li and Yves Lussier
BMC Medical Genomics 2014, 7(Suppl 1):S2
Integrative analysis reveals disease-associated genes and biomarkers for prostate cancer progression.
Yin Li, Wanwipa Vongsangnak, Luonan Chen and Bairong Shen
BMC Medical Genomics 2014, 7(Suppl 1):S3
A Coupling Approach of a Predictor and a Descriptor for Breast Cancer Prognosis.
Hyunjung Shin and Yonghyun Nam
BMC Medical Genomics 2014, 7(Suppl 1):S4
Derivative Component Analysis for Mass Spectral Serum Proteomic Profiles.
Henry Han
BMC Medical Genomics 2014, 7(Suppl 1):S5
IGENT: Efficient Entropy based Algorithm for Detecting Genome-wide Gene-Gene Interaction Analysis.
Min-Seok Kwon, Mira Park and Taesung Park
BMC Medical Genomics 2014, 7(Suppl 1):S6
Predicting different phenotypes of asthma and eczema using machine learning.
Mattia C. F. Prosperi, Susana Marinho, Angela Simpson, Adnan Custovic and Iain E. Buchan
BMC Medical Genomics 2014, 7(Suppl 1):S7
Identification of novel therapeutics for complex diseases from genome-wide association data.
Mani P. Grover, Sara Ballouz, Kaavya A. Mohanasundaram, Richard A. George, Craig D. H. Sherman, Tamsyn M. Crowley, Merridee. A. Wouters
BMC Medical Genomics 2014, 7(Suppl 1):S8
GAMUT: GPU Accelerated MicroRNA analysis to Uncover Target genes through CUDA-miRanda.
Shuang Wang, Jihoon Kim, Xiaoqian Jiang, Stefan F. Brunner and Lucila Ohno-Machado
BMC Medical Genomics 2014, 7(Suppl 1):S9
Integrated Analysis of microRNA-target Interactions with Clinical Outcomes for Cancers.
Je-Gun Joung, Dokyoon Kim, Su Yeon Lee, Hwa Jung Kang, Ju Han Kim
BMC Medical Genomics 2014, 7(Suppl 1):S10
Effectively processing medical term queries on the UMLS Metathesaurus by Layered Dynamic Programming.
Kaiyu Ren, Albert Lai, Kun Huang, Aveek Mukhopadhyay, Raghu Machiraju and Yang Xiang
BMC Medical Genomics 2014, 7(Suppl 1):S11
Automatic detection and resolution of measurement-unit conflicts in aggregated data.
Soroush Samadian, Bruce Mcmanus and Mark Wilkinson
BMC Medical Genomics 2014, 7(Suppl 1):S12
Comparison of warfarin therapy clinical outcomes following implementation of an automated mobile phone-based critical laboratory value text alert system.
Shu-Wen Lin, Wen-Yi Kang, Dong-Tsamn Lin, James Chao-Shen Lee, Fe-Lin Lin Wu, Chuen-Liang Chen and Yufeng J. Tseng
BMC Medical Genomics 2014, 7(Suppl 1):S13
Differentially Private Distributed Logistic Regression using Private and Public Data.
Zhanglong Ji, Xiaoqian Jiang, Shuang Wang, Li Xiong, Lucila Ohno-Machado
BMC Medical Genomics 2014, 7(Suppl 1):S14

The Multiscale Backbone of the Human Phenotype Network based on Biological PathwaysNetwork.
Christian Darabos, Marquitta J. White, Derek Leung, Scott Williams, Jason H. Moore and Britney E. Graham
BioData Mining 2014, 7:1
ATHENA: Identifying interactions between different levels of genomic data associated with cancer clinical outcomes using grammatical evolution neural network
Dokyoon Kim, Ruowang Li, Scott Dudek and Marylyn Ritchie
BioData Mining 2013, 6:23
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