Network models of genome-wide association studies uncover the topological centrality of protein interactions in complex diseases.
Lee Y, Li H, Li J, Rebman E, Achour I, Regan KE, Gamazon ER, Chen JL, Yang XH, Cox NJ, Lussier YA.
J Am Med Inform Assoc. 2013 Jan 25.

Role of genetic heterogeneity and epistasis in bladder cancer susceptibility and outcome: a learning classifier system approach.
Urbanowicz RJ, Andrew AS, Karagas MR, Moore JH.
J Am Med Inform Assoc. 2013 Feb 26.

Comparison and validation of genomic predictors for anticancer drug sensitivity.
Papillon-Cavanagh S, De Jay N, Hachem N, Olsen C, Bontempi G, Aerts HJ, Quackenbush J, Haibe-Kains B.
J Am Med Inform Assoc. 2013 Jan 26.

ICD-9 tobacco use codes are effective identifiers of smoking status.
Wiley LK, Shah A, Xu H, Bush WS.
J Am Med Inform Assoc. 2013 Feb 9.

Breast cancer survivability prediction using labeled, unlabeled, and pseudo-labeled patient data.
Kim J, Shin H.
J Am Med Inform Assoc. 2013 Mar 6.

An information-gain approach to detecting three-way epistatic interactions in genetic association studies.
Hu T, Chen Y, Kiralis JW, Collins RL, Wejse C, Sirugo G, Williams SM, Moore JH.
J Am Med Inform Assoc. 2013 Feb 18.

Extracting coordinated patterns of DNA methylation and gene expression in ovarian cancer.
Joung JG, Kim D, Kim KH, Kim JH.
J Am Med Inform Assoc. 2013 Apr 18.

A rational free energy-based approach to understanding and targeting disease-causing missense mutations.
Zhang Z, Witham S, Petukh M, Moroy G, Miteva M, Ikeguchi Y, Alexov E.
J Am Med Inform Assoc. 2013 Feb 13.






Translational bioinformatics has now come of age: TBC 2012 collection
Ju Han Kim
BMC Medical Genomics 2013, 6(Suppl 2):I1 (7 May 2013)

Analysis of small-sample clinical genomics studies using multi-parameter shrinkage: application to high-throughput RNA interference screening
Mark A van de Wiel, Renee X de Menezes, Ellen Siebring-van Olst, Victor W van Beusechem
BMC Medical Genomics 2013, 6(Suppl 2):S1 (7 May 2013)

Key genes for modulating information flow play a temporal role as breast tumor coexpression networks are dynamically rewired by letrozole
Nadia M Penrod, Jason H Moore
BMC Medical Genomics 2013, 6(Suppl 2):S2 (7 May 2013)

Compensating for literature annotation bias when predicting novel drug-disease relationships through Medical Subject Heading Over-representation Profile (MeSHOP) similarity
Warren A Cheung, BF Francis Ouellette, Wyeth W Wasserman
BMC Medical Genomics 2013, 6(Suppl 2):S3 (7 May 2013)

Curation-free biomodules mechanisms in prostate cancer predict recurrent disease
James L Chen, Alexander Hsu, Xinan Yang, Jianrong Li, Younghee Lee, Gurunadh Parinandi, Haiquan Li, Yves A Lussier
BMC Medical Genomics 2013, 6(Suppl 2):S4 (7 May 2013)

Diplotyper: diplotype-based association analysis
Sunshin Kim, KyungChae Park, Chol Shin, Nam H Cho, Jeong-Jae Ko, InSong Koh, KyuBum Kwack
BMC Medical Genomics 2013, 6(Suppl 2):S5 (7 May 2013)

BioBin: a bioinformatics tool for automating the binning of rare variants using publicly available biological knowledge
Carrie B Moore, John R Wallace, Alex T Frase, Sarah A Pendergrass, Marylyn D Ritchie
BMC Medical Genomics 2013, 6(Suppl 2):S6 (7 May 2013)

Altering physiological networks using drugs: steps towards personalized physiology
Adam D Grossman, Mitchell J Cohen, Geoffrey T Manley, Atul J Butte
BMC Medical Genomics 2013, 6(Suppl 2):S7 (7 May 2013)

Detecting early-warning signals of type 1 diabetes and its leading biomolecular networks by dynamical network biomarkers
Xiaoping Liu, Rui Liu, Xing-Ming Zhao, Luonan Chen
BMC Medical Genomics 2013, 6(Suppl 2):S8 (7 May 2013)

Identification of multiple gene-gene interactions for ordinal phenotypes
Kyunga Kim, Min-Seok Kwon, Sohee Oh, Taesung Park
BMC Medical Genomics 2013, 6(Suppl 2):S9 (7 May 2013)

Integrative analysis of congenital muscular torticollis: from gene expression to clinical significance
Shin-Young Yim, Dukyong Yoon, Myong Chul Park, Il Jae Lee, Jang-Hee Kim, Myung Ae Lee, Kyu-Sung Kwack, Jan-Dee Lee, Jeong-Hun Lee, Euy-Young Soh, Young-In Na, Rae Woong Park, KiYoung Lee, Jae-Bum Jun BMC Medical Genomics 2013, 6(Suppl 2):S10 (7 May 2013)